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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_008150 | AC108447 | 131522748 | 3 | chr8 | NT_008150 | AC090987 | 131588416 | 3 | 5592 | 0 | 0 | 5592 |
S/G/Y/R/B/O |
NT_008150 | AC108447 | 131522748 | 3 |   |   | AF130866 | 131588416 | | 24912 | 0 | 0 | 24912 |
S/G/Y/R/B/O |
NT_008150 | AC090987 | 131588416 | 3 | chr8 | NT_008150 | AC037453 | 131742221 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC090987 | 131588416 | 3 |   |   | AF130866 | 131522748 | | 19185 | 0 | 0 | 19185 |
S/G/Y/R/B/O |
NT_008150 | AC090987 | 131588416 | 3 |   |   | AF235099 | 131522748 | | 88934 | 0 | 0 | 88934 |
S/G/Y/R/B/O |
NT_008150 | AC090987 | 131588416 | 3 |   |   | AP005856 | 131522748 | | 35424 | 0 | 0 | 35424 |
S/G/Y/R/B/O |
NT_008150 | AC037453 | 131742221 | 3 | chr8 | NT_008150 | AC011974 | 131817654 | 3 | 58720 | 0 | 0 | 58720 |
S/G/Y/R/B/O |
NT_008150 | AC037453 | 131742221 | 3 |   |   | AC084226 | 131817654 | | 32670 | 0 | 0 | 32670 |
S/G/Y/R/B/O |
NT_008150 | AC011974 | 131817654 | 3 | chr8 | NT_008150 | AC103726 | 131911959 | 1 | 27957 | 0 | 0 | 27957 |
S/G/Y/R/B/O |
NT_008150 | AC011974 | 131817654 | 3 |   |   | AC084226 | 131742221 | | 92275 | 0 | 56631 | 148906 |
S/G/Y/R/B/O |
NT_008150 | AC011974 | 131817654 | 3 |   |   | AP005714 | 131911959 | | 36248 | 0 | 0 | 36248 |
S/G/Y/R/B/O |
NT_008150 | AC103726 | 131911959 | 1 | chr8 | NT_008150 | AC087341 | 132025968 | 3 | 21398 | 0 | 0 | 21398 |
S/G/Y/R/B/O |
NT_008150 | AC103726 | 131911959 | 1 |   |   | AC084226 | 21256529 | | 42126 | 0 | 997 | 43123 |
S/G/Y/R/B/O |
NT_008150 | AC103726 | 131911959 | 1 |   |   | AL161934 | 132025968 | | 21434 | 0 | 0 | 21434 |
S/G/Y/R/B/O |
NT_008150 | AC103726 | 131911959 | 1 |   |   | AP005714 | 132025968 | | 82311 | 0 | 0 | 82311 |
S/G/Y/R/B/O |
NT_008150 | AC087341 | 132025968 | 3 | chr8 | NT_008150 | AC120041 | 132195253 | 3 | 18542 | 0 | 0 | 18542 |
S/G/Y/R/B/O |
NT_008150 | AC087341 | 132025968 | 3 |   |   | AL161934 | 132195253 | | 101638 | 7877 | 0 | 109515 |
S/G/Y/R/B/O |
NT_008150 | AC120041 | 132195253 | 3 | chr8 | NT_008150 | AC104257 | 132329482 | 2 | 66290 | 0 | 0 | 66290 |
S/G/Y/R/B/O |
NT_008150 | AC104257 | 132329482 | 2 | chr8 | NT_008150 | AC104040 | 132360901 | 3 | 66218 | 0 | 0 | 66218 |
S/G/Y/R/B/O |
NT_008150 | AC104040 | 132360901 | 3 | chr8 | NT_008150 | AC018377 | 132497547 | 3 | 59782 | 0 | 0 | 59782 |
S/G/Y/R/B/O |
NT_008150 | AC104040 | 132360901 | 3 |   |   | AC010910 | 132195253 | | 59781 | 0 | 0 | 59781 |
S/G/Y/R/B/O |
NT_008150 | AC018377 | 132497547 | 3 | chr8 | NT_008150 | AC027761 | 132601407 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC027761 | 132601407 | 3 | chr8 | NT_008150 | AC007481 | 132675860 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC007481 | 132675860 | 3 | chr8 | NT_008150 | AC060788 | 132738006 | 3 | 0 | 0 | 1562 | 1562 |
S/G/Y/R/B/O |
NT_008150 | AC060788 | 132738006 | 3 | chr8 | NT_008150 | AC092817 | 132913720 | 3 | 11958 | 0 | 0 | 11958 |
S/G/Y/R/B/O |
NT_008150 | AC060788 | 132738006 | 3 |   |   | AC015591 | 132675860 | | 28361 | 0 | 0 | 28361 |
S/G/Y/R/B/O |
NT_008150 | AC092817 | 132913720 | 3 | chr8 | NT_008150 | AC026596 | 133070471 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC092817 | 132913720 | 3 | chr8 | NT_008150 | AC100868 | 133089335 | 3 | 88153 | 0 | 0 | 88153 |
S/G/Y/R/B/O |
NT_008150 | AC026596 | 133070471 | 3 | chr8 | NT_008150 | AC100868 | 133089335 | 3 | 106910 | 0 | 0 | 106910 |
S/G/Y/R/B/O |
NT_008150 | AC100868 | 133089335 | 3 | chr8 | NT_008150 | AC131042 | 133143110 | 3 | 13288 | 0 | 0 | 13288 |
S/G/Y/R/B/O |
NT_008150 | AC100868 | 133089335 | 3 | chr8 | NT_008150 | AC092817 | 132913720 | 3 | 88153 | 0 | 0 | 88153 |
S/G/Y/R/B/O |
NT_008150 | AC100868 | 133089335 | 3 |   |   | AC011200 | 41924807 | | 23066 | 0 | 0 | 23066 |
S/G/Y/R/B/O |
NT_008150 | AC100868 | 133089335 | 3 |   |   | AC090275 | 133070471 | | 33700 | 0 | 0 | 33700 |
S/G/Y/R/B/O |
NT_008150 | AC100868 | 133089335 | 3 |   |   | AF215843 | 133143110 | | 15693 | 0 | 1760 | 17453 |
S/G/Y/R/B/O |
NT_008150 | AC131042 | 133143110 | 3 | chr8 | NT_008150 | AC123776 | 133277092 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC131042 | 133143110 | 3 |   |   | AC090275 | 133143110 | | 35529 | 0 | 1395 | 36924 |
S/G/Y/R/B/O |
NT_008150 | AC131042 | 133143110 | 3 |   |   | AF215843 | 133089335 | | 50732 | 0 | 1249 | 51981 |
S/G/Y/R/B/O |
NT_008150 | AC123776 | 133277092 | 3 | chr8 | NT_008150 | AC063940 | 133434825 | 1 | 16288 | 0 | 11681 | 27969 |
S/G/Y/R/B/O |
NT_008150 | AC063940 | 133434825 | 1 | chr8 | NT_008150 | AC018540 | 133471515 | 2 | 56755 | 0 | 61631 | 118386 |
S/G/Y/R/B/O |
NT_008150 | AC063940 | 133434825 | 1 |   |   | AC021093 | 133471515 | | 16240 | 0 | 11810 | 28050 |
S/G/Y/R/B/O |
NT_008150 | AC063940 | 133434825 | 1 |   |   | AC084170 | 133471515 | | 68497 | 1605 | 35169 | 105271 |
S/G/Y/R/B/O |
NT_008150 | AC018540 | 133471515 | 2 | chr8 | NT_008150 | AF216667 | 133614599 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008150 | AC018540 | 133471515 | 2 |   |   | AC084170 | 133434825 | | 88183 | 1860 | 33743 | 123786 |
S/G/Y/R/B/O |
NT_008150 | AC018540 | 133471515 | 2 |   |   | AC090508 | 133434825 | | 30449 | 1887 | 1304 | 33640 |
S/G/Y/R/B/O |
NT_008150 | AF216667 | 133614599 | 3 | chr8 | NT_008150 | AF257497 | 133793379 | 3 | 72311 | 0 | 0 | 72311 |
S/G/Y/R/B/O |
NT_008150 | AF216667 | 133614599 | 3 |   |   | AC009622 | 133277092 | | 50192 | 0 | 0 | 50192 |
S/G/Y/R/B/O |
NT_008150 | AF216667 | 133614599 | 3 |   |   | AC090508 | 133434825 | | 174503 | 1887 | 1282 | 177672 |
S/G/Y/R/B/O |
NT_008150 | AF257497 | 133793379 | 3 | chr8 | NT_008150 | AF228727 | 133808288 | 3 | 5744 | 0 | 0 | 5744 |
S/G/Y/R/B/O |
NT_008150 | AF257497 | 133793379 | 3 |   |   | AC009622 | 133793379 | | 65098 | 0 | 0 | 65098 |
S/G/Y/R/B/O |
NT_008150 | AF257497 | 133793379 | 3 |   |   | AC090508 | 133793379 | | 72180 | 0 | 0 | 72180 |
S/G/Y/R/B/O |
NT_008150 | AF228727 | 133808288 | 3 | chr8 | NT_008150 | AF230666 | 133923902 | 3 | 22951 | 0 | 0 | 22951 |
S/G/Y/R/B/O |
NT_008150 | AF228727 | 133808288 | 3 |   |   | AC009622 | 133808288 | | 121111 | 0 | 0 | 121111 |
S/G/Y/R/B/O |
NT_008150 | AF228727 | 133808288 | 3 |   |   | AC087820 | 133808288 | | 84499 | 0 | 15301 | 99800 |
S/G/Y/R/B/O |
NT_008150 | AF230666 | 133923902 | 3 | chr8 | NT_008150 | AF230667 | 133987818 | 3 | 23858 | 0 | 0 | 23858 |
S/G/Y/R/B/O |
NT_008150 | AF230666 | 133923902 | 3 |   |   | AC009622 | 133793379 | | 26024 | 0 | 0 | 26024 |
S/G/Y/R/B/O |
NT_008150 | AF230666 | 133923902 | 3 |   |   | AC087820 | 133793379 | | 86789 | 0 | 0 | 86789 |
S/G/Y/R/B/O |
NT_008150 | AF230667 | 133987818 | 3 | chr8 | NT_008150 | AF305872 | 134061128 | 3 | 20427 | 0 | 0 | 20427 |
S/G/Y/R/B/O |
NT_008150 | AF230667 | 133987818 | 3 |   |   | AC069434 | 133987818 | | 68751 | 0 | 2911 | 71662 |
S/G/Y/R/B/O |
NT_008150 | AF230667 | 133987818 | 3 |   |   | AC079020 | 133987818 | | 10655 | 4140 | 2296 | 17091 |
S/G/Y/R/B/O |
NT_008150 | AF230667 | 133987818 | 3 |   |   | AC087820 | 133987818 | | 28378 | 0 | 10402 | 38780 |
S/G/Y/R/B/O |
NT_008150 | AF305872 | 134061128 | 3 | chr8 | NT_008150 | AF235100 | 134174916 | 3 | 31093 | 0 | 0 | 31093 |
S/G/Y/R/B/O |
NT_008150 | AF305872 | 134061128 | 3 |   |   | AC069434 | 134061128 | | 86847 | 0 | 16930 | 103777 |
S/G/Y/R/B/O |
NT_008150 | AF305872 | 134061128 | 3 |   |   | AC079020 | 134061128 | | 100938 | 14673 | 8277 | 123888 |
S/G/Y/R/B/O |
NT_008150 | AF305872 | 134061128 | 3 |   |   | AC090798 | 134061128 | | 78484 | 0 | 1345 | 79829 |
S/G/Y/R/B/O |
NT_008150 | AF235100 | 134174916 | 3 | chr8 | NT_008150 | AF192304 | 134273442 | 3 | 0 | 0 | 11390 | 11390 |
S/G/Y/R/B/O |
NT_008150 | AF235100 | 134174916 | 3 |   |   | AC079020 | 134174916 | | 45203 | 4400 | 3106 | 52709 |
S/G/Y/R/B/O |
NT_008150 | AF235100 | 134174916 | 3 |   |   | AC090798 | 134174916 | | 88814 | 0 | 2551 | 91365 |
S/G/Y/R/B/O |
NT_008150 | AF192304 | 134273442 | 3 | chr8 | NT_008150 | AF186190 | 134438703 | 3 | 87565 | 0 | 0 | 87565 |
S/G/Y/R/B/O |
NT_008150 | AF192304 | 134273442 | 3 |   |   | AC023088 | 134061128 | | 136955 | 3648 | 0 | 140603 |
S/G/Y/R/B/O |
NT_008150 | AF192304 | 134273442 | 3 |   |   | AC090768 | 134061128 | | 126632 | 2124 | 40656 | 169412 |
S/G/Y/R/B/O |
NT_008150 | AF186190 | 134438703 | 3 | chr8 | NT_008150 | AF186191 | 134503543 | 3 | 32035 | 0 | 0 | 32035 |
S/G/Y/R/B/O |
NT_008150 | AF186190 | 134438703 | 3 |   |   | AC023088 | 134174916 | | 115255 | 2656 | 589 | 118500 |
S/G/Y/R/B/O |
NT_008150 | AF186190 | 134438703 | 3 |   |   | AC090768 | 134174916 | | 73792 | 2124 | 8214 | 84130 |
S/G/Y/R/B/O |
NT_008150 | AF186191 | 134503543 | 3 | chr8 | NT_008150 | AC103706 | 134576145 | 3 | 21824 | 0 | 0 | 21824 |
S/G/Y/R/B/O |
NT_008150 | AF186191 | 134503543 | 3 |   |   | AF155238 | 134576145 | | 64008 | 0 | 0 | 64008 |
S/G/Y/R/B/O |
NT_008150 | AC103706 | 134576145 | 3 | chr8 | NT_008150 | AC090821 | 134743503 | 3 | 18494 | 0 | 0 | 18494 |
S/G/Y/R/B/O |
NT_008150 | AC103706 | 134576145 | 3 |   |   | AC017097 | 134438703 | | 58883 | 5427 | 1347 | 65657 |
S/G/Y/R/B/O |
NT_008150 | AC103706 | 134576145 | 3 |   |   | AC068301 | 134438703 | | 85383 | 3682 | 32604 | 121669 |
S/G/Y/R/B/O |
NT_008150 | AC103706 | 134576145 | 3 |   |   | AF155238 | 134743503 | | 62700 | 0 | 0 | 62700 |
S/G/Y/R/B/O |
NT_008150 | AC103706 | 134576145 | 3 |   |   | AF212832 | 134503543 | | 107056 | 0 | 0 | 107056 |
S/G/Y/R/B/O |
NT_008150 | AC090821 | 134743503 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_008150 | AC090821 | 134743503 | 3 |   |   | AC017097 | 134503543 | | 119918 | 4637 | 5936 | 130491 |
S/G/Y/R/B/O |
NT_008150 | AC090821 | 134743503 | 3 |   |   | AC017097 | 134503543 | | 119918 | 4637 | 5936 | 130491 |
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