Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_008292

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_008292	AC100870	80294529	3	chr8	NT_008292	AC025599	80484261	3	20317	0	0	20317
S/G/Y/R/B/O	NT_008292	AC025599	80484261	3	chr8	NT_008292	AC016240	80622274	2	10541	0	0	10541
S/G/Y/R/B/O	NT_008292	AC025599	80484261	3			AC068995	80622274		43797	0	28356	72153
S/G/Y/R/B/O	NT_008292	AC025599	80484261	3			AF261720	80294529		33811	0	6534	40345
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2	chr8	NT_008292	AC036214	80777839	3	0	1477	0	1477
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AC068995	80777839		48331	0	34862	83193
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AC068995	80777839		48331	0	34862	83193
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AC087769	80777839		86957	0	0	86957
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AC087769	80777839		86957	0	0	86957
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AF261720	80777839		114205	0	6534	120739
S/G/Y/R/B/O	NT_008292	AC016240	80622274	2			AF261720	80777839		114205	0	6534	120739
S/G/Y/R/B/O	NT_008292	AC036214	80777839	3	chr8	NT_008292	AC018952	80938384	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC018952	80938384	3	chr8	NT_008292	AC009686	80986026	2	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC009686	80986026	2	chr8	NT_008292	AC104212	81106497	3	48865	0	0	48865
S/G/Y/R/B/O	NT_008292	AC104212	81106497	3	chr8	NT_008292	AC034114	81303303	2	0	0	32885	32885
S/G/Y/R/B/O	NT_008292	AC034114	81303303	2	chr8	NT_008292	AC009812	81379142	3	44961	0	0	44961
S/G/Y/R/B/O	NT_008292	AC009812	81379142	3	chr8	NT_008292	AC009871	81534547	3	53604	0	0	53604
S/G/Y/R/B/O	NT_008292	AC009871	81534547	3	chr8	NT_008292	AC022598	81563049	3	8648	0	0	8648
S/G/Y/R/B/O	NT_008292	AC022598	81563049	3	chr8	NT_008292	AC024367	81709722	3	44234	0	0	44234
S/G/Y/R/B/O	NT_008292	AC024367	81709722	3	chr8	NT_008292	AC012533	81835507	3	45473	0	0	45473
S/G/Y/R/B/O	NT_008292	AC024367	81709722	3			AC016506	81835507		15432	0	0	15432
S/G/Y/R/B/O	NT_008292	AC024367	81709722	3			AC016507	81835507		10856	3371	0	14227
S/G/Y/R/B/O	NT_008292	AC012533	81835507	3	chr8	NT_008292	AC022778	81981386	3	111381	0	0	111381
S/G/Y/R/B/O	NT_008292	AC012533	81835507	3			AC016506	81563049		129913	2469	18111	150493
S/G/Y/R/B/O	NT_008292	AC012533	81835507	3			AC016507	81563049		128805	4669	0	133474
S/G/Y/R/B/O	NT_008292	AC022778	81981386	3	chr8	NT_008292	AC079209	82008958	3	27558	0	0	27558
S/G/Y/R/B/O	NT_008292	AC022778	81981386	3			AC016506	81835507		81444	2469	18127	102040
S/G/Y/R/B/O	NT_008292	AC022778	81981386	3			AC016507	81835507		84744	0	0	84744
S/G/Y/R/B/O	NT_008292	AC079209	82008958	3	chr8	NT_008292	AC009902	82146592	3	48615	0	0	48615
S/G/Y/R/B/O	NT_008292	AC079209	82008958	3			AC022647	82146592		71755	0	1105	72860
S/G/Y/R/B/O	NT_008292	AC009902	82146592	3	chr8	NT_008292	AC018616	82315223	3	13493	0	0	13493
S/G/Y/R/B/O	NT_008292	AC009902	82146592	3			AC022647	82315223		148271	0	2574	150845
S/G/Y/R/B/O	NT_008292	AC009902	82146592	3			AC026617	82315223		66703	0	0	66703
S/G/Y/R/B/O	NT_008292	AC018616	82315223	3	chr8	NT_008292	AC023644	82467678	3	2001	0	0	2001
S/G/Y/R/B/O	NT_008292	AC018616	82315223	3			AC013542	82146592		56441	0	619	57060
S/G/Y/R/B/O	NT_008292	AC023644	82467678	3	chr8	NT_008292	AC090255	82525734	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC090255	82525734	3	chr8	NT_008292	AC084697	82646057	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC090255	82525734	3			AC010000	82315223		145586	0	0	145586
S/G/Y/R/B/O	NT_008292	AC090255	82525734	3			AC013542	82315223		66562	2403	6811	75776
S/G/Y/R/B/O	NT_008292	AC090255	82525734	3			AF165141	82667629		46911	0	0	46911
S/G/Y/R/B/O	NT_008292	AC084697	82646057	3	chr8	NT_008292	AC132219	82667629	3	16540	0	0	16540
S/G/Y/R/B/O	NT_008292	AC084697	82646057	3			AC024371	82667629		15886	0	36315	52201
S/G/Y/R/B/O	NT_008292	AC084697	82646057	3			AF165141	82667629		46943	0	0	46943
S/G/Y/R/B/O	NT_008292	AC132219	82667629	3	chr8	NT_008292	AC087349	82788312	1	21753	0	0	21753
S/G/Y/R/B/O	NT_008292	AC132219	82667629	3			AC018882	82667629		18950	2674	0	21624
S/G/Y/R/B/O	NT_008292	AC132219	82667629	3			AC024371	82667629		88939	2639	40645	132223
S/G/Y/R/B/O	NT_008292	AC087349	82788312	1	chr8	NT_008292	AC104018	82837640	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC087349	82788312	1			AC018882	82525734		91267	2678	11855	105800
S/G/Y/R/B/O	NT_008292	AC087349	82788312	1			AC018882	82525734		91267	2678	11855	105800
S/G/Y/R/B/O	NT_008292	AC087349	82788312	1			AC024371	82525734		18563	0	0	18563
S/G/Y/R/B/O	NT_008292	AC087349	82788312	1			AC024371	82525734		18563	0	0	18563
S/G/Y/R/B/O	NT_008292	AC104018	82837640	3	chr8	NT_008292	AC127034	83023612	3	0	0	284	284
S/G/Y/R/B/O	NT_008292	AC104018	82837640	3			AC018882	82667629		81167	0	5439	86606
S/G/Y/R/B/O	NT_008292	AC104018	82837640	3			AC027701	82667629		57109	0	0	57109
S/G/Y/R/B/O	NT_008292	AC127034	83023612	3	chr8	NT_008292	AC019252	83126146	3	0	0	24086	24086
S/G/Y/R/B/O	NT_008292	AC127034	83023612	3			AC027701	83126146		77947	0	0	77947
S/G/Y/R/B/O	NT_008292	AC019252	83126146	3	chr8	NT_008292	AC022260	83238892	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC022260	83238892	3	chr8	NT_008292	AC060765	83392674	3	8162	0	0	8162
S/G/Y/R/B/O	NT_008292	AC060765	83392674	3	chr8	NT_008292	AC069359	83554904	3	22494	0	0	22494
S/G/Y/R/B/O	NT_008292	AC069359	83554904	3	chr8	NT_008292	AC110025	83619379	3	37699	0	0	37699
S/G/Y/R/B/O	NT_008292	AC110025	83619379	3	chr8	NT_008292	AC091192	83689731	3	29528	0	0	29528
S/G/Y/R/B/O	NT_008292	AC091192	83689731	3	chr8	NT_008292	AC105031	83835535	3	6117	0	0	6117
S/G/Y/R/B/O	NT_008292	AC091192	83689731	3			AC073282	83689731		85565	9561	38441	133567
S/G/Y/R/B/O	NT_008292	AC105031	83835535	3	chr8	NT_008292	AC018443	83940729	3	54304	0	0	54304
S/G/Y/R/B/O	NT_008292	AC105031	83835535	3	chr8	NT_008292	AC090095	84086080	3	21402	0	0	21402
S/G/Y/R/B/O	NT_008292	AC018443	83940729	3	chr8	NT_008292	AC090095	84086080	3	166813	0	0	166813
S/G/Y/R/B/O	NT_008292	AC090095	84086080	3	chr8	NT_008292	AC090132	84113340	3	11416	0	0	11416
S/G/Y/R/B/O	NT_008292	AC090095	84086080	3	chr8	NT_008292	AC105031	83835535	3	21402	0	0	21402
S/G/Y/R/B/O	NT_008292	AC090132	84113340	3	chr8	NT_008292	AC022821	84306914	3	43232	0	0	43232
S/G/Y/R/B/O	NT_008292	AC090132	84113340	3			AC069139	84306914		150638	6414	18308	175360
S/G/Y/R/B/O	NT_008292	AC022821	84306914	3	chr8	NT_008292	AC016879	84435321	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC022821	84306914	3			AC069139	84086080		28432	0	12775	41207
S/G/Y/R/B/O	NT_008292	AC016879	84435321	3	chr8	NT_008292	AC087209	84528402	3	57237	0	0	57237
S/G/Y/R/B/O	NT_008292	AC016879	84435321	3			AC024254	84113340		25741	3427	39730	68898
S/G/Y/R/B/O	NT_008292	AC087209	84528402	3	chr8	NT_008292	AC104013	84615258	3	38742	0	0	38742
S/G/Y/R/B/O	NT_008292	AC087209	84528402	3			AC024254	84435321		60914	8759	52698	122371
S/G/Y/R/B/O	NT_008292	AC104013	84615258	3	chr8	NT_008292	AC104425	84734804	3	17826	0	0	17826
S/G/Y/R/B/O	NT_008292	AC104013	84615258	3			AC024254	84615258		28540	4201	239	32980
S/G/Y/R/B/O	NT_008292	AC104425	84734804	3	chr8	NT_008292	AC015522	84857331	3	2226	0	0	2226
S/G/Y/R/B/O	NT_008292	AC015522	84857331	3	chr8	NT_008292	AC104940	85002128	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC104940	85002128	3	chr8	NT_008292	AC012400	85083073	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC012400	85083073	3	chr8	NT_008292	AC103816	85204320	3	25478	0	0	25478
S/G/Y/R/B/O	NT_008292	AC103816	85204320	3	chr8	NT_008292	AC092699	85340599	3	23074	0	0	23074
S/G/Y/R/B/O	NT_008292	AC103816	85204320	3			AC024698	85083073		45596	5603	60208	111407
S/G/Y/R/B/O	NT_008292	AC092699	85340599	3	chr8	NT_008292	AC027043	85438951	3	0	0	73646	73646
S/G/Y/R/B/O	NT_008292	AC092699	85340599	3			AC022273	85340599		59412	0	0	59412
S/G/Y/R/B/O	NT_008292	AC092699	85340599	3			AC023116	85340599		37992	0	0	37992
S/G/Y/R/B/O	NT_008292	AC092699	85340599	3			AC090569	85438951		38663	0	0	38663
S/G/Y/R/B/O	NT_008292	AC027043	85438951	3	chr8	NT_008292	AC092709	85520627	3	41872	0	0	41872
S/G/Y/R/B/O	NT_008292	AC027043	85438951	3			AC023116	85204320		62839	0	44297	107136
S/G/Y/R/B/O	NT_008292	AC027043	85438951	3			AC074371	85204320		24510	10559	1767	36836
S/G/Y/R/B/O	NT_008292	AC027043	85438951	3			AC084257	85204320		57311	0	0	57311
S/G/Y/R/B/O	NT_008292	AC027043	85438951	3			AC090569	85204320		120407	0	0	120407
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3	chr8	NT_008292	AC087368	85657626	3	85930	0	0	85930
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC022273	85520627		28007	0	0	28007
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC023116	85520627		73087	2875	12529	88491
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC024197	85520627		14143	0	13113	27256
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC074371	85438951		59675	20741	34391	114807
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC084257	85438951		76100	0	0	76100
S/G/Y/R/B/O	NT_008292	AC092709	85520627	3			AC090569	85657626		90666	0	0	90666
S/G/Y/R/B/O	NT_008292	AC087368	85657626	3	chr8	NT_008292	AC009901	85757009	3	3734	0	0	3734
S/G/Y/R/B/O	NT_008292	AC087368	85657626	3			AC024197	85757009		65542	6520	36807	108869
S/G/Y/R/B/O	NT_008292	AC087368	85657626	3			AC074371	85757009		14054	10176	17209	41439
S/G/Y/R/B/O	NT_008292	AC087368	85657626	3			AC083924	85757009		39580	0	0	39580
S/G/Y/R/B/O	NT_008292	AC009901	85757009	3	chr8	NT_008292	AC091175	85905235	3	23405	0	0	23405
S/G/Y/R/B/O	NT_008292	AC009901	85757009	3			AC083924	85520627		136894	0	0	136894
S/G/Y/R/B/O	NT_008292	AC091175	85905235	3	chr8	NT_008292	AC083962	85966381	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC083962	85966381	3	chr8	NT_008292	AC011773	86002246	3	0	0	0	0
S/G/Y/R/B/O	NT_008292	AC011773	86002246	3	chr8	NT_008292	AC025800	86127387	3	40093	0	0	40093
S/G/Y/R/B/O	NT_008292	AC025800	86127387	3	chr8	NT_008292	AC084734	86272653	3	52226	0	0	52226
S/G/Y/R/B/O	NT_008292	AC084734	86272653	3	chr8	NT_008292	AC093331	86401448	1	38603	0	0	38603
S/G/Y/R/B/O	NT_008292	AC084734	86272653	3			AC008862	86272653		81026	0	0	81026
S/G/Y/R/B/O	NT_008292	AC084734	86272653	3			AC025131	86272653		44468	2714	11417	58599
S/G/Y/R/B/O	NT_008292	AC093331	86401448	1
S/G/Y/R/B/O	NT_008292	AC093331	86401448	1			AC012191	86401448		88032	0	75774	163806
S/G/Y/R/B/O	NT_008292	AC093331	86401448	1			AC025131	86529975		60338	0	30520	90858