Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_030737

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_030737	AC105058	16236168	3	chr8	NT_030737	AC091162	16405440	3	46852	0	0	46852
S/G/Y/R/B/O	NT_030737	AC105058	16236168	3			AC073490	15887991		46842	0	0	46842
S/G/Y/R/B/O	NT_030737	AC091162	16405440	3	chr8	NT_030737	AC011586	16508219	3	0	1517	0	1517
S/G/Y/R/B/O	NT_030737	AC091162	16405440	3			AC073490	16508219		149058	0	0	149058
S/G/Y/R/B/O	NT_030737	AC011586	16508219	3	chr8	NT_030737	AC068992	16674177	3	7363	0	0	7363
S/G/Y/R/B/O	NT_030737	AC011586	16508219	3			AC026663	16236168		24091	0	0	24091
S/G/Y/R/B/O	NT_030737	AC011586	16508219	3			AC069388	16674177		75362	4218	38603	118183
S/G/Y/R/B/O	NT_030737	AC011586	16508219	3			AC087347	16674177		26205	0	0	26205
S/G/Y/R/B/O	NT_030737	AC068992	16674177	3	chr8	NT_030737	AC025218	16810414	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC068992	16674177	3			AC026663	16508219		40633	9583	55448	105664
S/G/Y/R/B/O	NT_030737	AC068992	16674177	3			AC087347	16508219		104518	1756	6145	112419
S/G/Y/R/B/O	NT_030737	AC025218	16810414	3	chr8	NT_030737	AB020858	16933096	3	0	0	9643	9643
S/G/Y/R/B/O	NT_030737	AC025218	16810414	3			AC072058	16933096		28956	0	31647	60603
S/G/Y/R/B/O	NT_030737	AB020858	16933096	3	chr8	NT_030737	AB020859	17023163	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020858	16933096	3			AC072058	16810414		24489	1912	38814	65215
S/G/Y/R/B/O	NT_030737	AB020858	16933096	3			AC079193	16810414		67975	0	0	67975
S/G/Y/R/B/O	NT_030737	AB020858	16933096	3			AC079193	16810414		67975	0	0	67975
S/G/Y/R/B/O	NT_030737	AB020859	17023163	3	chr8	NT_030737	AB020860	17123163	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020859	17023163	3			AC079193	16810414		98935	0	0	98935
S/G/Y/R/B/O	NT_030737	AB020859	17023163	3			AC079193	16810414		98935	0	0	98935
S/G/Y/R/B/O	NT_030737	AB020859	17023163	3			AC091050	16810414		73511	0	0	73511
S/G/Y/R/B/O	NT_030737	AB020860	17123163	3	chr8	NT_030737	AB020861	17223163	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020860	17123163	3			AC091050	16810414		65486	0	0	65486
S/G/Y/R/B/O	NT_030737	AB020861	17223163	3	chr8	NT_030737	AB020862	17323163	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020862	17323163	3	chr8	NT_030737	AB020863	17423163	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020862	17323163	3			AC016117	16810414		20383	0	0	20383
S/G/Y/R/B/O	NT_030737	AB020862	17323163	3			AC079187	16810414		38055	0	2351	40406
S/G/Y/R/B/O	NT_030737	AB020862	17323163	3			AC124074	16810414		65075	0	0	65075
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3	chr8	NT_030737	AB020864	17580072	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC016117	16810414		55367	0	72168	127535
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC026842	16810414		83753	6035	0	89788
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC079187	16810414		86919	0	1759	88678
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC084079	16810414		78994	2715	13114	94823
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC124069	16810414		31723	1219	0	32942
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AC124069	16810414		31723	1219	0	32942
S/G/Y/R/B/O	NT_030737	AB020863	17423163	3			AF165145	16810414		67686	0	0	67686
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3	chr8	NT_030737	AB020865	17680072	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AC026842	16810414		31771	0	0	31771
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AC027117	16810414		52947	0	0	52947
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AC027117	16810414		52947	0	0	52947
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AC124069	16810414		99575	0	0	99575
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AC124069	16810414		99575	0	0	99575
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AF165145	16810414		63339	0	0	63339
S/G/Y/R/B/O	NT_030737	AB020864	17580072	3			AF267167	16810414		91791	0	0	91791
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3	chr8	NT_030737	AB020866	17780072	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AC027117	16810414		99597	0	0	99597
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AC027117	16810414		99597	0	0	99597
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AC087273	16810414		58765	0	0	58765
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AC124069	16810414		40769	0	0	40769
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AC124069	16810414		40769	0	0	40769
S/G/Y/R/B/O	NT_030737	AB020865	17680072	3			AF267167	16810414		75233	10852	2912	88997
S/G/Y/R/B/O	NT_030737	AB020866	17780072	3	chr8	NT_030737	AB020867	17880072	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020866	17780072	3			AC026854	16810414		26131	2327	11313	39771
S/G/Y/R/B/O	NT_030737	AB020866	17780072	3			AC034166	16810414		40823	3687	25619	70129
S/G/Y/R/B/O	NT_030737	AB020867	17880072	3	chr8	NT_030737	AB020868	17980072	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020867	17880072	3			AC034166	16810414		21991	5074	58446	85511
S/G/Y/R/B/O	NT_030737	AB020867	17880072	3			AC124242	16810414		10368	0	2271	12639
S/G/Y/R/B/O	NT_030737	AB020867	17880072	3			AC124242	16810414		10368	0	2271	12639
S/G/Y/R/B/O	NT_030737	AB020868	17980072	3	chr8	NT_030737	AC025062	18133543	3	2631	0	0	2631
S/G/Y/R/B/O	NT_030737	AB020868	17980072	3			AC124242	18133543		152136	0	0	152136
S/G/Y/R/B/O	NT_030737	AB020868	17980072	3			AC124242	18133543		152136	0	0	152136
S/G/Y/R/B/O	NT_030737	AC025062	18133543	3	chr8	NT_030737	AC120051	18321364	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC025062	18133543	3			AC124242	17980072		56298	0	0	56298
S/G/Y/R/B/O	NT_030737	AC025062	18133543	3			AC124242	17980072		56298	0	0	56298
S/G/Y/R/B/O	NT_030737	AC120051	18321364	3	chr8	NT_030737	AC100800	18465934	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC120051	18321364	3			AC024238	17980072		25313	1558	42210	69081
S/G/Y/R/B/O	NT_030737	AC120051	18321364	3			AC025648	17980072		74486	8103	43862	126451
S/G/Y/R/B/O	NT_030737	AC120051	18321364	3			AC090148	17980072		26141	0	0	26141
S/G/Y/R/B/O	NT_030737	AC100800	18465934	3	chr8	NT_030737	AC090420	18662783	3	135973	0	0	135973
S/G/Y/R/B/O	NT_030737	AC100800	18465934	3			AC024037	17980072		112640	6492	9544	128676
S/G/Y/R/B/O	NT_030737	AC100800	18465934	3			AC024238	17980072		29902	896	11920	42718
S/G/Y/R/B/O	NT_030737	AC100800	18465934	3			AC083848	17980072		95911	1926	44694	142531
S/G/Y/R/B/O	NT_030737	AC100800	18465934	3			AC090148	17980072		59072	0	0	59072
S/G/Y/R/B/O	NT_030737	AC090420	18662783	3	chr8	NT_030737	AC087821	18743511	3	55275	0	0	55275
S/G/Y/R/B/O	NT_030737	AC090420	18662783	3			AC024037	18662783		146483	13185	25858	185526
S/G/Y/R/B/O	NT_030737	AC090420	18662783	3			AC024929	18662783		22773	0	5241	28014
S/G/Y/R/B/O	NT_030737	AC090420	18662783	3			AC083848	18662783		76998	0	27541	104539
S/G/Y/R/B/O	NT_030737	AC087821	18743511	3	chr8	NT_030737	AC009884	18856004	3	40423	0	0	40423
S/G/Y/R/B/O	NT_030737	AC087821	18743511	3			AC024037	18856004		23111	2851	6770	32732
S/G/Y/R/B/O	NT_030737	AC087821	18743511	3			AC024929	18856004		95059	9969	3850	108878
S/G/Y/R/B/O	NT_030737	AC009884	18856004	3	chr8	NT_030737	AC100849	18974836	3	2132	0	0	2132
S/G/Y/R/B/O	NT_030737	AC009884	18856004	3			AC024929	18662783		25524	4862	0	30386
S/G/Y/R/B/O	NT_030737	AC100849	18974836	3	chr8	NT_030737	AC068880	19127791	3	23728	0	0	23728
S/G/Y/R/B/O	NT_030737	AC100849	18974836	3			AC027634	18856004		49354	0	0	49354
S/G/Y/R/B/O	NT_030737	AC100849	18974836	3			AC060813	18856004		110776	0	0	110776
S/G/Y/R/B/O	NT_030737	AC068880	19127791	3	chr8	NT_030737	AC090786	19317601	3	8482	0	0	8482
S/G/Y/R/B/O	NT_030737	AC068880	19127791	3			AC060813	19127791		106500	0	0	106500
S/G/Y/R/B/O	NT_030737	AC090786	19317601	3	chr8	NT_030737	AC116376	19497389	3	19495	0	0	19495
S/G/Y/R/B/O	NT_030737	AC090786	19317601	3			AF127414	19497389		55829	3000	726	59555
S/G/Y/R/B/O	NT_030737	AC116376	19497389	3	chr8	NT_030737	AC090541	19545986	3	21901	0	0	21901
S/G/Y/R/B/O	NT_030737	AC116376	19497389	3			AF127414	19317601		88429	0	0	88429
S/G/Y/R/B/O	NT_030737	AC116376	19497389	3			AF271406	19317601		21900	0	0	21900
S/G/Y/R/B/O	NT_030737	AC090541	19545986	3	chr8	NT_030737	AC024993	19713305	3	123156	0	0	123156
S/G/Y/R/B/O	NT_030737	AC090541	19545986	3			AF127414	19497389		21826	0	0	21826
S/G/Y/R/B/O	NT_030737	AC090541	19545986	3			AF271406	19497389		23987	0	105661	129648
S/G/Y/R/B/O	NT_030737	AC024993	19713305	3	chr8	NT_030737	AC107964	19731904	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC107964	19731904	3	chr8	NT_030737	AC100802	19861696	3	0	0	20152	20152
S/G/Y/R/B/O	NT_030737	AC107964	19731904	3			AC015465	19545986		76079	0	0	76079
S/G/Y/R/B/O	NT_030737	AC107964	19731904	3			AC074252	19545986		43745	938	0	44683
S/G/Y/R/B/O	NT_030737	AC100802	19861696	3	chr8	NT_030737	AC025853	20023644	3	20802	0	0	20802
S/G/Y/R/B/O	NT_030737	AC100802	19861696	3			AC015465	19861696		46849	7155	28246	82250
S/G/Y/R/B/O	NT_030737	AC100802	19861696	3			AC074252	20023644		69769	2929	36136	108834
S/G/Y/R/B/O	NT_030737	AC100802	19861696	3			AC090741	20023644		119623	0	0	119623
S/G/Y/R/B/O	NT_030737	AC025853	20023644	3	chr8	NT_030737	AC023403	20197325	3	3958	0	0	3958
S/G/Y/R/B/O	NT_030737	AC023403	20197325	3	chr8	NT_030737	AC022559	20386765	3	14442	0	0	14442
S/G/Y/R/B/O	NT_030737	AC023403	20197325	3			AC135066	20023644		85059	0	0	85059
S/G/Y/R/B/O	NT_030737	AC023403	20197325	3			AC135066	20023644		85059	0	0	85059
S/G/Y/R/B/O	NT_030737	AC022559	20386765	3	chr8	NT_030737	AC090805	20442268	3	81022	0	0	81022
S/G/Y/R/B/O	NT_030737	AC022559	20386765	3			AC135066	20442268		135601	0	0	135601
S/G/Y/R/B/O	NT_030737	AC022559	20386765	3			AC135066	20442268		135601	0	0	135601
S/G/Y/R/B/O	NT_030737	AC022559	20386765	3			AC135066	20442268		135601	0	0	135601
S/G/Y/R/B/O	NT_030737	AC022559	20386765	3			AC135066	20442268		135601	0	0	135601
S/G/Y/R/B/O	NT_030737	AC090805	20442268	3	chr8	NT_030737	AC018541	20540219	3	2206	0	0	2206
S/G/Y/R/B/O	NT_030737	AC090805	20442268	3			AC135066	20386765		65131	0	0	65131
S/G/Y/R/B/O	NT_030737	AC090805	20442268	3			AC135066	20386765		65131	0	0	65131
S/G/Y/R/B/O	NT_030737	AC018541	20540219	3	chr8	NT_030737	AC021955	20595354	3	99106	0	0	99106
S/G/Y/R/B/O	NT_030737	AC018541	20540219	3			AC087619	20595354		48417	0	0	48417
S/G/Y/R/B/O	NT_030737	AC018541	20540219	3			AC087619	20595354		48417	0	0	48417
S/G/Y/R/B/O	NT_030737	AC021955	20595354	3
S/G/Y/R/B/O	NT_030737	AC021955	20595354	3	chr8	NT_034940	AC015468	21056867	3	68589	0	0	68589
S/G/Y/R/B/O	NT_030737	AC021955	20595354	3			AC087619	20540219		104412	0	0	104412