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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006679
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006679AC025443359861393        
S/G/Y/R/B/O NT_006679AC109475360074192        
S/G/Y/R/B/O NT_006679AC093506360849411        
S/G/Y/R/B/O NT_006679AC013581362002871        
S/G/Y/R/B/O NT_006679AC093279362014973        
S/G/Y/R/B/O NT_006679AC114302363550353        
S/G/Y/R/B/O NT_006679AC025754364740853AFM270VE9552.20551.991AC016602, AC008950, AC016602, AC025754
S/G/Y/R/B/O NT_006679AC016602365159503        
S/G/Y/R/B/O NT_006679AC026801365983533AFM238WE11551.60551.991AC016602, AC025769, AC016602, AC025769
S/G/Y/R/B/O NT_006679AC026801366350033AFM311WH9551.40551.991AC025769, AC008690, AC025769, AC026801, AC107616
S/G/Y/R/B/O NT_006679AC008795367877153AFM220XH12  551.991 AC008795, AC011145
S/G/Y/R/B/O NT_006679AC008795367877153AFM220XH12550.70  1 AC008795, AC011145
S/G/Y/R/B/O NT_006679AC010368368430923        
S/G/Y/R/B/O NT_006679AC010375369777271        
S/G/Y/R/B/O NT_006679AC091851369929751        
S/G/Y/R/B/O NT_006679AC025769375171971AFM238WF101963.601964.162AC008537, AC008537, AC025769, NG_000008
S/G/Y/R/B/O NT_006679AC026731371081423        
S/G/Y/R/B/O NT_006679AC027347372668933AFMA066WG5552.20552.551AC008929, AC008929
S/G/Y/R/B/O NT_006679AC008929372736243        
S/G/Y/R/B/O NT_006679AC034179373144821        
S/G/Y/R/B/O NT_006679AC116365373307271        
S/G/Y/R/B/O NT_006679AC025448373908152