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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006907
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006907AC1133721752483671        
S/G/Y/R/B/O NT_006907AC0113841752968583GATA7H10  5172.131AC113372, AC011384, AC113372
S/G/Y/R/B/O NT_006907AC0113841753019783AFM200VF65173.205172.671AC113372, AC011384, AC113372
S/G/Y/R/B/O NT_006907AC0086341754162253AFM234VH45172.605172.131 AC008634
S/G/Y/R/B/O NT_006907AC0087081754787942        
S/G/Y/R/B/O NT_006907AC0212881755300641        
S/G/Y/R/B/O NT_006907AC0933041755945702        
S/G/Y/R/B/O NT_006907AC0084641757033962        
S/G/Y/R/B/O NT_006907AC0087051757642053        
S/G/Y/R/B/O NT_006907AC0113691759959073GATA22C12  5172.671AC008637, AC008637, AC011369
S/G/Y/R/B/O NT_006907AC0086371760219941        
S/G/Y/R/B/O NT_006907AC0257641760282172        
S/G/Y/R/B/O NT_006907AC0266891761463331AFM324TD55173.205172.671AC008637, AC025764, AC008637, AC025764, AC026689
S/G/Y/R/B/O NT_006907AC0266891762084571AFMA196ZG15175.305175.341 AC026689
S/G/Y/R/B/O NT_006907AC0208941762987912        
S/G/Y/R/B/O NT_006907AC0091871763082642        
S/G/Y/R/B/O NT_006907AC0084771763805421        
S/G/Y/R/B/O NT_006907AC0214681764240471        
S/G/Y/R/B/O NT_006907AC0085901764701343        
S/G/Y/R/B/O NT_006907AC0113651765533082        
S/G/Y/R/B/O NT_006907AC0273111766162583        
S/G/Y/R/B/O NT_006907AC0940811767478633AFMB336WD55173.205173.731 AC094081
S/G/Y/R/B/O NT_006907AC0940811768120793AFMB354XH15174.305172.671AC011389, AC011389, AC094081
S/G/Y/R/B/O NT_006907AC0113891768662212AFM112YB65174.305174.801 AC011389
S/G/Y/R/B/O NT_006907AC0461821770574301AFM324YF95174.805175.341AC008409, AC008409
S/G/Y/R/B/O NT_006907AC0084091769872891AFMB332XH15174.305175.341AC046182, AC008409, AC046182
S/G/Y/R/B/O NT_006907AC1121651770799021        
S/G/Y/R/B/O NT_006907AC0084791771131852        
S/G/Y/R/B/O NT_006907AC0086651772513593        
S/G/Y/R/B/O NT_006907AC0086801774274633GATA11A11  5174.801 AC008680
S/G/Y/R/B/O NT_006907AC0103031776022163AFM265VG55175.305175.341 AC022927
S/G/Y/R/B/O NT_006907AC0103031776327963AFMA133YD55175.305175.341 AC010303
S/G/Y/R/B/O NT_006907AC0084491776769973        
S/G/Y/R/B/O NT_006907AC0086481777509133        
S/G/Y/R/B/O NT_006907AC0266951778839433AFMA196XG15175.305175.341 AC026695
S/G/Y/R/B/O NT_006907AC0086601780024153AFM080XH115174.305175.341 AC008660
S/G/Y/R/B/O NT_006907AC0341991780606803        
S/G/Y/R/B/O NT_006907AC0273061781891073UT7277  5175.341 AC027306, AC027741
S/G/Y/R/B/O NT_006907AC0086191783004043        
S/G/Y/R/B/O NT_006907AC1134321783884251        
S/G/Y/R/B/O NT_006907AC0273121784107133        
S/G/Y/R/B/O NT_006907AC0087191785650123AFM210VF125176.905177.061 AC008719
S/G/Y/R/B/O NT_006907AC0085141786101053        
S/G/Y/R/B/O NT_006907AC0187531787433963        
S/G/Y/R/B/O NT_006907AC0210771788064392        
S/G/Y/R/B/O NT_006907AC0165741788962053304XD5  5177.921AC021077, AC021077
S/G/Y/R/B/O NT_006907 - UT886  5174.800AC112165, AC112165