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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023089
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023089AC0342183024963        
S/G/Y/R/B/O NT_023089AC0251873742703        
S/G/Y/R/B/O NT_023089AC0257735451523AFM336TC158.2059.411 AC025773
S/G/Y/R/B/O NT_023089AC0257735488903AFM154XA358.2059.411 AC025773
S/G/Y/R/B/O NT_023089AC0923196181501        
S/G/Y/R/B/O NT_023089AC0922667054492        
S/G/Y/R/B/O NT_023089AC1133597113931        
S/G/Y/R/B/O NT_023089AC0211787696231        
S/G/Y/R/B/O NT_023089AC0267098304912        
S/G/Y/R/B/O NT_023089AC0252289260201        
S/G/Y/R/B/O NT_023089AC0233889310211        
S/G/Y/R/B/O NT_023089AC02577510062083AFMA183WH554.3055.431AC025228, AC025228, AC025775
S/G/Y/R/B/O NT_023089AC09322410517183        
S/G/Y/R/B/O NT_023089AC02679110929793        
S/G/Y/R/B/O NT_023089AC09189112334053        
S/G/Y/R/B/O NT_023089AC02593713362791        
S/G/Y/R/B/O NT_023089AC11635913434301        
S/G/Y/R/B/O NT_023089AC09410513815831        
S/G/Y/R/B/O NT_023089AC02532414484951        
S/G/Y/R/B/O NT_023089AC11219215237142        
S/G/Y/R/B/O NT_023089AC09183216858033AFM205WH855.5056.671AC013801, AC025460, AC112192, AC013801, AC018427, AC022051, AC025460, AC091832, AC112192
S/G/Y/R/B/O NT_023089AC02546017512583        
S/G/Y/R/B/O NT_023089AC10412118150502        
S/G/Y/R/B/O NT_023089AC01380118378041        
S/G/Y/R/B/O NT_023089AC01039019121303        
S/G/Y/R/B/O NT_023089AC02674319434433AFMA217YH156.2057.771 AC026743
S/G/Y/R/B/O NT_023089AC02674319714113GATA145D10  57.771 AC026743
S/G/Y/R/B/O NT_023089AC01659520912012        
S/G/Y/R/B/O NT_023089AC01049620947381        
S/G/Y/R/B/O NT_023089AC09194722705011GATA31H11  59.411AC026903, AC026903, AC091947
S/G/Y/R/B/O NT_023089AC02690322579581        
S/G/Y/R/B/O NT_023089 - AFMA139YA9  51.721AC022130, AC114955, AC022130, AC114955
S/G/Y/R/B/O NT_023089 - AFMA217ZH150.6051.721AC116351, AC116351
S/G/Y/R/B/O NT_023089 - AFMB002XC1  51.721AC114955, AC114955