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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_016714
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016714AC0923181426262851        
S/G/Y/R/B/O NT_016714AC1163561426285211        
S/G/Y/R/B/O NT_016714AC1067751426668103        
S/G/Y/R/B/O NT_016714AC0040211427910183AFMA224YB15141.405141.821AC092318, AC116356, AC092318, AC116356
S/G/Y/R/B/O NT_016714AC1067911428286293        
S/G/Y/R/B/O NT_016714AC0048201429179833        
S/G/Y/R/B/O NT_016714AC0060841429871963        
S/G/Y/R/B/O NT_016714AC1067531431089352        
S/G/Y/R/B/O NT_016714AC1133411431373191        
S/G/Y/R/B/O NT_016714AC1133821431980081        
S/G/Y/R/B/O NT_016714AC0048261432981713        
S/G/Y/R/B/O NT_016714AC1067521433694372AFM200YA95141.405141.821AC092317, AC092317, AC106752
S/G/Y/R/B/O NT_016714AC1041161433985112        
S/G/Y/R/B/O NT_016714AC0923171434061941        
S/G/Y/R/B/O NT_016714AC0048211434479933        
S/G/Y/R/B/O NT_016714AC1134031436406671AFM240XG35141.405140.721AC011381, AC011381, AC113403, AF095901
S/G/Y/R/B/O NT_016714AC0113811436646362        
S/G/Y/R/B/O NT_016714AC1133401437384513AFM176XA75141.405140.721 AC011385, AC113340
S/G/Y/R/B/O NT_016714AC0104531437825223        
S/G/Y/R/B/O NT_016714AC1094401438662023        
S/G/Y/R/B/O NT_016714AC0342431438662293        
S/G/Y/R/B/O NT_016714AC0114051439894413        
S/G/Y/R/B/O NT_016714AC0113781441416632        
S/G/Y/R/B/O NT_016714AC0734841441817041        
S/G/Y/R/B/O NT_016714AC0086141442701713UT520  5140.721 AC008614
S/G/Y/R/B/O NT_016714AC0114041443585103        
S/G/Y/R/B/O NT_016714AC1080801444799743