Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - Genetic Maps - Single Contig
 

Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_007022
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007022AC008434838192521        
S/G/Y/R/B/O NT_007022AC022223838285341        
S/G/Y/R/B/O NT_007022AC008907838424891GATA3H06  5105.292AC008850, AC008865, AC008908, AC008850, AC008865, AC008905, AC008907, AC008908
S/G/Y/R/B/O NT_007022AC114969839228431        
S/G/Y/R/B/O NT_007022AC022931839334221        
S/G/Y/R/B/O NT_007022AC023549839609521        
S/G/Y/R/B/O NT_007022AC106824840509241        
S/G/Y/R/B/O NT_007022AC010628840934652        
S/G/Y/R/B/O NT_007022AC010598841365423AFMB307YD5592.50592.381AC010628, AC106824, AC010598, AC010628, AC106824
S/G/Y/R/B/O NT_007022AC010598843020773AFM214XE9592.50592.381AC026698, AC005406, AC010598, AC026698
S/G/Y/R/B/O NT_007022AC026698843523043AFM200WA5592.50592.381 AC005406, AC026698
S/G/Y/R/B/O NT_007022AC091861844715073        
S/G/Y/R/B/O NT_007022AC026782844895963AFM286WF1592.30592.381 AC026782
S/G/Y/R/B/O NT_007022AC026782845653173AFM353TB9592.40592.381 AC026782
S/G/Y/R/B/O NT_007022AC026782846821693AFM284VD1592.30592.381 AC026782
S/G/Y/R/B/O NT_007022AC008885847753333GATA142H05  592.381AC108174, AC008885, AC090073, AC108174
S/G/Y/R/B/O NT_007022AC108174848090123        
S/G/Y/R/B/O NT_007022AC027338849541413UT717  592.381 AC027327
S/G/Y/R/B/O NT_007022AC104118850024543        
S/G/Y/R/B/O NT_007022AC022416850679733AFMA055TD9593.70593.591 AC022416
S/G/Y/R/B/O NT_007022AC094085851460291        
S/G/Y/R/B/O NT_007022AC099510851548031        
S/G/Y/R/B/O NT_007022AC010270852053652        
S/G/Y/R/B/O NT_007022AC034211853175363AFMA125WF5593.70593.591AC016568, AC016568, AC023134, AC025439
S/G/Y/R/B/O NT_007022AC016568853216403        
S/G/Y/R/B/O NT_007022AC026696855109813        
S/G/Y/R/B/O NT_007022AC020921856425613AFM284WE5595.40  1AC020899, AC020899, AC020921
S/G/Y/R/B/O NT_007022AC020921856425613AFM284WE5  595.091AC020899, AC020899, AC020921
S/G/Y/R/B/O NT_007022AC020899856585493        
S/G/Y/R/B/O NT_007022AC093286857934221        
S/G/Y/R/B/O NT_007022AC008908859294152        
S/G/Y/R/B/O NT_007022AC022493861307223        
S/G/Y/R/B/O NT_007022AC008518862838003        
S/G/Y/R/B/O NT_007022AC026427864508221        
S/G/Y/R/B/O NT_007022AC020901865596483ATA1H07  1745.931  
S/G/Y/R/B/O NT_007022AC026436866403953        
S/G/Y/R/B/O NT_007022AC008411867263133        
S/G/Y/R/B/O NT_007022AC010600867764452        
S/G/Y/R/B/O NT_007022AC093207868540091        
S/G/Y/R/B/O NT_007022AC026419869208522        
S/G/Y/R/B/O NT_007022AC016562870235951        
S/G/Y/R/B/O NT_007022AC012205870465001        
S/G/Y/R/B/O NT_007022AC093273871581831        
S/G/Y/R/B/O NT_007022AC026726872216133        
S/G/Y/R/B/O NT_007022 - GATA91E02  594.800