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  Chromosome 5 - Genetic Maps - Single Contig
 

Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023195
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023195AC112204377770371AFM063YB6552.20552.552AC116333, AC112204, AC112486, AC116333
S/G/Y/R/B/O NT_023195AC116333377047521        
S/G/Y/R/B/O NT_023195AC008860379522493AFMB297ZA5552.20552.551AC016612, AC008860, AC008947, AC016612
S/G/Y/R/B/O NT_023195AC016612379739923AFM016YG5  552.551AC022136, AC016612, AC022136, AC025444
S/G/Y/R/B/O NT_023195AC016612379739923AFM016YG5551.50  1AC022136, AC016612, AC022136, AC025444
S/G/Y/R/B/O NT_023195AC008942380638343        
S/G/Y/R/B/O NT_023195AC008807382112863        
S/G/Y/R/B/O NT_023195AC026439382770553AFMA046XG9552.20552.551AC114277, AC026439, AC114277
S/G/Y/R/B/O NT_023195AC114277383248313        
S/G/Y/R/B/O NT_023195AC114950383994243AFMA286ZE9551.70551.991AC026724, AC026724, AC092281, AC114950
S/G/Y/R/B/O NT_023195AC026724384113091        
S/G/Y/R/B/O NT_023195AC010631385043393        
S/G/Y/R/B/O NT_023195AC008957386178853        
S/G/Y/R/B/O NT_023195AC026463386925553        
S/G/Y/R/B/O NT_023195AC026741388399383        
S/G/Y/R/B/O NT_023195AC008902389719713        
S/G/Y/R/B/O NT_023195AC008925390489943        
S/G/Y/R/B/O NT_023195AC025449392931963AFMB290YF1553.30553.671AF165926, AC008832, AC025449, AF165926
S/G/Y/R/B/O NT_023195AF165926393259373        
S/G/Y/R/B/O NT_023195AC053526394191241        
S/G/Y/R/B/O NT_023195AC068049394515761        
S/G/Y/R/B/O NT_023195AC025469395088702AFM044XA3552.20553.231AC068049, AC025469, AC068049
S/G/Y/R/B/O NT_023195AC093269395848491        
S/G/Y/R/B/O NT_023195AC093261396083921        
S/G/Y/R/B/O NT_023195AC008869397769463AFMB285XC9554.40554.791AC093261, AC008869, AC093261, AC108087
S/G/Y/R/B/O NT_023195AC008869398188203AFM155XH12554.40554.791 AC008869, AC108087
S/G/Y/R/B/O NT_023195AC034226400189553AFMA074YG5554.40554.791 AC034226
S/G/Y/R/B/O NT_023195AC074129400429773        
S/G/Y/R/B/O NT_023195AC091430400450423        
S/G/Y/R/B/O NT_023195AC010338401291853        
S/G/Y/R/B/O NT_023195AC010351402302983        
S/G/Y/R/B/O NT_023195AC091839403308233        
S/G/Y/R/B/O NT_023195AC010457404113023        
S/G/Y/R/B/O NT_023195AC091823404700013        
S/G/Y/R/B/O NT_023195AC010425405749923        
S/G/Y/R/B/O NT_023195AC091435406634323        
S/G/Y/R/B/O NT_023195AC026713407916613        
S/G/Y/R/B/O NT_023195AC016719409010191        
S/G/Y/R/B/O NT_023195AC109467409362762        
S/G/Y/R/B/O NT_023195AC008964409393833        
S/G/Y/R/B/O NT_023195AC010633410832243        
S/G/Y/R/B/O NT_023195AC025471411701753        
S/G/Y/R/B/O NT_023195AC008846412984673        
S/G/Y/R/B/O NT_023195AC008916414371583GATA30D08  557.301AC008959, AC008916, AC008959, AC069179
S/G/Y/R/B/O NT_023195AC008916414591923UT5005  557.301AC008959, AC008916, AC008959
S/G/Y/R/B/O NT_023195AC008959414756733        
S/G/Y/R/B/O NT_023195AC026708416027463UT516  559.851AC027475, AC026708, AC027475
S/G/Y/R/B/O NT_023195AC091886416044863        
S/G/Y/R/B/O NT_023195AC027475416480821        
S/G/Y/R/B/O NT_023195AC093217416495081        


  NT_023195 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023195AC026209416811491ATA23F04  559.301AC027475, AC027475
S/G/Y/R/B/O NT_023195AC027504417141661        
S/G/Y/R/B/O NT_023195AC108105417212841        
S/G/Y/R/B/O NT_023195AC116363419546531AFM205ZH4558.10558.551AC027504, AC092288, AC027504, AC092288, AC116363
S/G/Y/R/B/O NT_023195AC114320417399113        
S/G/Y/R/B/O NT_023195AC008820417846903AFM242XC5  559.301 AC008820
S/G/Y/R/B/O NT_023195AC026714418568753AFMB285YD9558.00558.551 AC025247, AC026714
S/G/Y/R/B/O NT_023195AC092288419819262        
S/G/Y/R/B/O NT_023195AC109494419995162        
S/G/Y/R/B/O NT_023195AC010165421571883GATA32A11  558.911 AC010165, AC022241, AC113394
S/G/Y/R/B/O NT_023195AC008842421849843        
S/G/Y/R/B/O NT_023195AC110001421976563        
S/G/Y/R/B/O NT_023195AC016369422323501        
S/G/Y/R/B/O NT_023195AC093277423415491        
S/G/Y/R/B/O NT_023195AC114977423865431        
S/G/Y/R/B/O NT_023195AC093264425257603        
S/G/Y/R/B/O NT_023195AC008810426899773        
S/G/Y/R/B/O NT_023195AC008922427828533        
S/G/Y/R/B/O NT_023195AC026732428258643        
S/G/Y/R/B/O NT_023195AC114967428862021        
S/G/Y/R/B/O NT_023195AC067784429726451GATA21D04  559.301AC114967, AC018595, AC067784, AC114967
S/G/Y/R/B/O NT_023195AC008863430610803        
S/G/Y/R/B/O NT_023195AC091871431174441        
S/G/Y/R/B/O NT_023195AC016332431378651        
S/G/Y/R/B/O NT_023195AC008830432677413AFM276VB1559.90559.851AC016332, AC016332
S/G/Y/R/B/O NT_023195AC008830433295273AFM207YG5559.30559.851AC016332, AC094082, AC008830, AC016332, AC022141, AC094082
S/G/Y/R/B/O NT_023195AC094082433560711AFM248WD5558.80559.301AC008830, AC021600, AC008830, AC021600, AC022141, AC094082
S/G/Y/R/B/O NT_023195AC021600433648141        
S/G/Y/R/B/O NT_023195AC020940433984611        
S/G/Y/R/B/O NT_023195AC109453434050931        
S/G/Y/R/B/O NT_023195AC025649434315621        
S/G/Y/R/B/O NT_023195AC008817435815943        
S/G/Y/R/B/O NT_023195AC114946437678791        
S/G/Y/R/B/O NT_023195AC010408437903341        
S/G/Y/R/B/O NT_023195AC034222438394622        
S/G/Y/R/B/O NT_023195AC022972439882181        
S/G/Y/R/B/O NT_023195AC008912440479023AFM348TF5560.00560.921 AC008912
S/G/Y/R/B/O NT_023195AC108099441245793        
S/G/Y/R/B/O NT_023195AC104114442618293        
S/G/Y/R/B/O NT_023195AC026655442794151