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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_029973
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029973AC010410896232903        
S/G/Y/R/B/O NT_029973AC035142896411753        
S/G/Y/R/B/O NT_029973AC018754897229583        
S/G/Y/R/B/O NT_029973AC015452898629551        
S/G/Y/R/B/O NT_029973AC025245898870551        
S/G/Y/R/B/O NT_029973AC091877899428661        
S/G/Y/R/B/O NT_029973AC008939899876722        
S/G/Y/R/B/O NT_029973AC074216900124851        
S/G/Y/R/B/O NT_029973AC021141900216501        
S/G/Y/R/B/O NT_029973AC020930901269643GATA3G10  597.211AC021141, AC020930, AC021141
S/G/Y/R/B/O NT_029973AC008839901792623        
S/G/Y/R/B/O NT_029973AC116335902363553        
S/G/Y/R/B/O NT_029973AC093241902848952        
S/G/Y/R/B/O NT_029973AC114971903147893        
S/G/Y/R/B/O NT_029973AC013656904341391        
S/G/Y/R/B/O NT_029973AC010243904470132        
S/G/Y/R/B/O NT_029973AC010897905354391        
S/G/Y/R/B/O NT_029973AC016555906378413GATA156G02  597.821AC010897, AC010897, AC013617, AC016555
S/G/Y/R/B/O NT_029973AC114978906949753        
S/G/Y/R/B/O NT_029973AC091826907296911        
S/G/Y/R/B/O NT_029973AC008487907858301        
S/G/Y/R/B/O NT_029973AC094090908765651        
S/G/Y/R/B/O NT_029973AC008526908974213        
S/G/Y/R/B/O NT_029973AC012604910656643        
S/G/Y/R/B/O NT_029973AC026701910691333        
S/G/Y/R/B/O NT_029973AC008525911529963        
S/G/Y/R/B/O NT_029973AC008835912208413        
S/G/Y/R/B/O NT_029973AC019295913401951        
S/G/Y/R/B/O NT_029973AC010259915231523GATA83C12  597.821AC010596, AC009990, AC010259, AC010596
S/G/Y/R/B/O NT_029973AC010596915373443        
S/G/Y/R/B/O NT_029973 - AFM063YA5  597.211AC008430, AC008430, AC010623