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Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006899
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006899AC0137701170142951        
S/G/Y/R/B/O NT_006899AC1094731170158283        
S/G/Y/R/B/O NT_006899AC0085751171861913        
S/G/Y/R/B/O NT_006899AC0085361172662643        
S/G/Y/R/B/O NT_006899AC1067501174251082        
S/G/Y/R/B/O NT_006899AC0104811174671011        
S/G/Y/R/B/O NT_006899AC0159751175914601        
S/G/Y/R/B/O NT_006899AC0841791176166821        
S/G/Y/R/B/O NT_006899AC0133431176408561        
S/G/Y/R/B/O NT_006899AC0794651178460322AFM308WA95121.605122.011 AC025185, AC067893, AC079465
S/G/Y/R/B/O NT_006899AC0104311179658763AFMA342YF55121.705122.011AC093208, AC008476, AC008602, AC010431, AC093208
S/G/Y/R/B/O NT_006899AC0932081180253033AFM210VD65121.405122.011 AC008602, AC093208
S/G/Y/R/B/O NT_006899AC0103891180629043        
S/G/Y/R/B/O NT_006899AC0932401181947793        
S/G/Y/R/B/O NT_006899AC0935281182798983        
S/G/Y/R/B/O NT_006899AC0940991183960621        
S/G/Y/R/B/O NT_006899AC1067891185092441        
S/G/Y/R/B/O NT_006899AC0239521185096711        
S/G/Y/R/B/O NT_006899AC0229551185259871        
S/G/Y/R/B/O NT_006899AC0841351188029791AFM212YB85123.005123.451 AC084135
S/G/Y/R/B/O NT_006899AC0940881186970813        
S/G/Y/R/B/O NT_006899AC1133641188507291        
S/G/Y/R/B/O NT_006899AC0935271190203333AFMC031XB55121.705122.011AC025761, AC025761
S/G/Y/R/B/O NT_006899AC0257611190420833        
S/G/Y/R/B/O NT_006899AC0214151190611931        
S/G/Y/R/B/O NT_006899AC1094821190673212        
S/G/Y/R/B/O NT_006899AC0102301191376783        
S/G/Y/R/B/O NT_006899AC0686601192566823        
S/G/Y/R/B/O NT_006899AC0086211194166553AFM309VD55121.505122.011AC022321, AC022321
S/G/Y/R/B/O NT_006899AC0084921194297573        
S/G/Y/R/B/O NT_006899AC0994841195178322GATA73D11  5123.451 AC099484
S/G/Y/R/B/O NT_006899AC0223211195639111        
S/G/Y/R/B/O NT_006899AC0190301195987971