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  Chromosome 5 - Genetic Maps - Single Contig
 

Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_016755
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016755AC0106111266481181        
S/G/Y/R/B/O NT_016755AC0227121266534841        
S/G/Y/R/B/O NT_016755AC1067571266774561        
S/G/Y/R/B/O NT_016755AC0214631266878211        
S/G/Y/R/B/O NT_016755AC0108021267012531        
S/G/Y/R/B/O NT_016755AC1143111267177671        
S/G/Y/R/B/O NT_016755AC0086931268118893AFMB329ZB15131.205131.481 AC008693
S/G/Y/R/B/O NT_016755AC0267201268431133        
S/G/Y/R/B/O NT_016755AC0085801269942032        
S/G/Y/R/B/O NT_016755AC0210761270136633        
S/G/Y/R/B/O NT_016755AC0224491271057313        
S/G/Y/R/B/O NT_016755AC0165561273038603AFMA060TF15131.205131.481 AC008527
S/G/Y/R/B/O NT_016755AC0254651273415482        
S/G/Y/R/B/O NT_016755AC0104071273933832        
S/G/Y/R/B/O NT_016755AC1121961274841581        
S/G/Y/R/B/O NT_016755AC1133571274882971        
S/G/Y/R/B/O NT_016755AC0085121275073173        
S/G/Y/R/B/O NT_016755AC0210801276012283AFMB283ZD15130.705130.941AC008512, AC008580, AC008512, AC008580
S/G/Y/R/B/O NT_016755AC0267731276182613        
S/G/Y/R/B/O NT_016755AC0085411276819953        
S/G/Y/R/B/O NT_016755AC0264221278173943        
S/G/Y/R/B/O NT_016755AC1067921278708503        
S/G/Y/R/B/O NT_016755AC0103691279500773        
S/G/Y/R/B/O NT_016755AC0104931280728103        
S/G/Y/R/B/O NT_016755AC0085481281666702AFM205ZD45130.605130.381AC023974, AC008548, AC023974
S/G/Y/R/B/O NT_016755AC0086061281971562        
S/G/Y/R/B/O NT_016755AC0239741282018611        
S/G/Y/R/B/O NT_016755AC1067861282342203        
S/G/Y/R/B/O NT_016755AC0221161283383993        
S/G/Y/R/B/O NT_016755AC0086691285746103AFMA202ZG55130.705130.941AC021463, AC008669, AC021463
S/G/Y/R/B/O NT_016755AC0103721286304843GATA5G04  5133.651 AC008624, AC010372, AC094102
S/G/Y/R/B/O NT_016755AC0103721287086753UT2422  5133.651 AC011255
S/G/Y/R/B/O NT_016755AC0105871287405183        
S/G/Y/R/B/O NT_016755AC0267231288955243GATA46H11  5133.651AC008433, AC022712, AC008433, AC022712, AC026723, AC093257
S/G/Y/R/B/O NT_016755AC0084331289077503        
S/G/Y/R/B/O NT_016755AC0932451289856003        
S/G/Y/R/B/O NT_016755AC0102351290291233        
S/G/Y/R/B/O NT_016755AC0085461292352323        
S/G/Y/R/B/O NT_016755AC0935351293034213        
S/G/Y/R/B/O NT_016755AC0995131294266993        
S/G/Y/R/B/O NT_016755AC0231961295299471        
S/G/Y/R/B/O NT_016755AC0932421295349121        
S/G/Y/R/B/O NT_016755AC0935211295425662        
S/G/Y/R/B/O NT_016755AC0166761295598551        
S/G/Y/R/B/O NT_016755AC1094641295634001        
S/G/Y/R/B/O NT_016755AC0932201296132011        
S/G/Y/R/B/O NT_016755AC1094501296541432        
S/G/Y/R/B/O NT_016755AC1133981297152252        
S/G/Y/R/B/O NT_016755AC0102551301216353AFM127XD105131.205131.481 AC010255, AC090062, AF270645
S/G/Y/R/B/O NT_016755AC0084361302466933        


  NT_016755 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016755AC1133491303534961        
S/G/Y/R/B/O NT_016755AC0994981303794302        
S/G/Y/R/B/O NT_016755AC0221011305250593        
S/G/Y/R/B/O NT_016755AC1100031306413651AFM303TC95130.705130.941 AC110003
S/G/Y/R/B/O NT_016755AC0932061308029943        
S/G/Y/R/B/O NT_016755AC0084441309135373ATA24E05  5129.271AC044796, AC093242, AC008444, AC044796, AC093242
S/G/Y/R/B/O NT_016755AC0104621309759733        
S/G/Y/R/B/O NT_016755AC0086291310878893        
S/G/Y/R/B/O NT_016755AC0170441312207391        
S/G/Y/R/B/O NT_016755AC1094581312221012        
S/G/Y/R/B/O NT_016755AC0447961312795772        
S/G/Y/R/B/O NT_016755AC1100091313386912        
S/G/Y/R/B/O NT_016755AC1143181313943062        
S/G/Y/R/B/O NT_016755AC0133901315363901        
S/G/Y/R/B/O NT_016755AC0162821315646541        
S/G/Y/R/B/O NT_016755AC1094711316393273        
S/G/Y/R/B/O NT_016755AC1094431316962363        
S/G/Y/R/B/O NT_016755AC0210821318233313AFMC006XF95132.805133.651AC024630, AC024630
S/G/Y/R/B/O NT_016755AC0246221318773931        
S/G/Y/R/B/O NT_016755AC1163621318848961        
S/G/Y/R/B/O NT_016755AC0246301318889661        
S/G/Y/R/B/O NT_016755 - GATA70D09  5130.940AC008580, AC008580, AC026409
S/G/Y/R/B/O NT_016755 - AFM292ZE9  5133.651AC005352, AC005353, AC005352, AC005353
S/G/Y/R/B/O NT_016755 - AFM214YG15132.805133.651 AC005611, AC008398