Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - Genetic Maps - Single Contig
 

Chromosome 5 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006693
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006693AC027153516253831        
S/G/Y/R/B/O NT_006693AC106817516308251        
S/G/Y/R/B/O NT_006693AC091935516654332        
S/G/Y/R/B/O NT_006693AC109998517622473        
S/G/Y/R/B/O NT_006693AC091903518880413AFMB319WH1560.00559.851AC109998, AC091903, AC109998
S/G/Y/R/B/O NT_006693AC091920519807301        
S/G/Y/R/B/O NT_006693AC008827521316413UT5795  559.851 AC008827
S/G/Y/R/B/O NT_006693AC022433521682423        
S/G/Y/R/B/O NT_006693AC008936523412953AFM309VD9559.90559.851AC091860, AC008936, AC091860
S/G/Y/R/B/O NT_006693AC091860523816681        
S/G/Y/R/B/O NT_006693AC010478524325643        
S/G/Y/R/B/O NT_006693AC026798525790233UT7924  559.851AC091831, AC026798, AC091831
S/G/Y/R/B/O NT_006693AC026798526267203AFM224ZH2559.90559.851 AC026798
S/G/Y/R/B/O NT_006693AC091834526285093        
S/G/Y/R/B/O NT_006693AC091866526819673        
S/G/Y/R/B/O NT_006693AC091831528019701        
S/G/Y/R/B/O NT_006693AC008808528268863AFM122XE5  559.851AC022430, AC008808, AC022430
S/G/Y/R/B/O NT_006693AC008831528448703        
S/G/Y/R/B/O NT_006693AC008919529675603        
S/G/Y/R/B/O NT_006693AC112187530742491        
S/G/Y/R/B/O NT_006693AC022430531806431        
S/G/Y/R/B/O NT_006693AC016631531937462        
S/G/Y/R/B/O NT_006693AC008944532456793        
S/G/Y/R/B/O NT_006693AC116357534230501UT1621  559.851AC091935, AC091935, AC116357
S/G/Y/R/B/O NT_006693AC091827535063203        
S/G/Y/R/B/O NT_006693AC022126536711403        
S/G/Y/R/B/O NT_006693AC008900538671183AFMA053YC1561.10560.921AC026230, AC008900, AC018652, AC026230, AC108115
S/G/Y/R/B/O NT_006693AC026230539097983        
S/G/Y/R/B/O NT_006693AC008910539721223        
S/G/Y/R/B/O NT_006693AC027326539796993        
S/G/Y/R/B/O NT_006693AC022133539898853        
S/G/Y/R/B/O NT_006693AC025180540394743        
S/G/Y/R/B/O NT_006693AC008966541171863AFM207YG11561.10560.921 AC008455, AC008973, AC016619
S/G/Y/R/B/O NT_006693AC016641542705292        
S/G/Y/R/B/O NT_006693AC026477542995971        
S/G/Y/R/B/O NT_006693AC008866543270572        
S/G/Y/R/B/O NT_006693AC026752543550561        
S/G/Y/R/B/O NT_006693AC027329543797903        
S/G/Y/R/B/O NT_006693AC108114544540502AFMB322WC9561.10560.921 AC108114
S/G/Y/R/B/O NT_006693AC008901545554823        
S/G/Y/R/B/O NT_006693AC024569547213983        
S/G/Y/R/B/O NT_006693AC025175548886323        
S/G/Y/R/B/O NT_006693AC024571550843623AFMA162YD5561.10560.921AC016601, AC008792, AC016601, AC024571
S/G/Y/R/B/O NT_006693AC016601551279223        
S/G/Y/R/B/O NT_006693AC008882552294363AFM254WF1561.10560.921AC034246, AC008777, AC008882, AC016580, AC026006, AC034246
S/G/Y/R/B/O NT_006693AC034246552519983        
S/G/Y/R/B/O NT_006693AC008935553841533AFMA154ZG9561.00560.921AC008873, AC008873, AC008935, AC016580
S/G/Y/R/B/O NT_006693AC008873554793933UT6396  560.921AC092366, AC008873, AC092366
S/G/Y/R/B/O NT_006693AC092366555422633        
S/G/Y/R/B/O NT_006693AC091888556068902        


  NT_006693 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006693AC010835556345621        
S/G/Y/R/B/O NT_006693AC016581556516151        
S/G/Y/R/B/O NT_006693AC008928556649803        
S/G/Y/R/B/O NT_006693AC016583557752773