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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_009482 | AC117501 | 129449202 | 3 | chr12 | NT_009482 | AC079456 | 129467402 | 3 | 0 | 0 | 1556 | 1556 |
S/G/Y/R/B/O |
NT_009482 | AC079456 | 129467402 | 3 | chr12 | NT_009482 | AC128708 | 129643081 | 3 | 2004 | 0 | 0 | 2004 |
S/G/Y/R/B/O |
NT_009482 | AC079456 | 129467402 | 3 |   |   | AC068929 | 129467402 | | 174514 | 0 | 0 | 174514 |
S/G/Y/R/B/O |
NT_009482 | AC079456 | 129467402 | 3 |   |   | AC073860 | 129467402 | | 25662 | 0 | 3692 | 29354 |
S/G/Y/R/B/O |
NT_009482 | AC079456 | 129467402 | 3 |   |   | AC125635 | 129449202 | | 53978 | 0 | 0 | 53978 |
S/G/Y/R/B/O |
NT_009482 | AC128708 | 129643081 | 3 | chr12 | NT_009482 | AC023243 | 129743825 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009482 | AC128708 | 129643081 | 3 |   |   | AC024980 | 129643081 | | 42967 | 3367 | 217 | 46551 |
S/G/Y/R/B/O |
NT_009482 | AC128708 | 129643081 | 3 |   |   | AC130404 | 129467402 | | 50493 | 0 | 217 | 50710 |
S/G/Y/R/B/O |
NT_009482 | AC023243 | 129743825 | 1 | chr12 | NT_009482 | AC041019 | 129797469 | 1 | 76337 | 3343 | 1347 | 81027 |
S/G/Y/R/B/O |
NT_009482 | AC023243 | 129743825 | 1 |   |   | AC024980 | 37338890 | | 79928 | 17165 | 11627 | 108720 |
S/G/Y/R/B/O |
NT_009482 | AC023243 | 129743825 | 1 |   |   | AC130404 | 37201966 | | 84327 | 5994 | 9518 | 99839 |
S/G/Y/R/B/O |
NT_009482 | AC041019 | 129797469 | 1 | chr12 | NT_009482 | AC117373 | 129878019 | 1 | 16927 | 0 | 0 | 16927 |
S/G/Y/R/B/O |
NT_009482 | AC041019 | 129797469 | 1 |   |   | AC018873 | 37334132 | | 17971 | 1486 | 8540 | 27997 |
S/G/Y/R/B/O |
NT_009482 | AC041019 | 129797469 | 1 |   |   | AC024980 | 129743825 | | 56289 | 5185 | 5162 | 66636 |
S/G/Y/R/B/O |
NT_009482 | AC041019 | 129797469 | 1 |   |   | AC130404 | 129878019 | | 62999 | 0 | 2797 | 65796 |
S/G/Y/R/B/O |
NT_009482 | AC117373 | 129878019 | 1 | chr12 | NT_009482 | AC055717 | 130071371 | 3 | 17933 | 0 | 0 | 17933 |
S/G/Y/R/B/O |
NT_009482 | AC117373 | 129878019 | 1 |   |   | AC018873 | 129878019 | | 92691 | 9932 | 23307 | 125930 |
S/G/Y/R/B/O |
NT_009482 | AC117373 | 129878019 | 1 |   |   | AC026664 | 129878019 | | 18624 | 0 | 9353 | 27977 |
S/G/Y/R/B/O |
NT_009482 | AC055717 | 130071371 | 3 | chr12 | NT_009482 | AC026339 | 130275796 | 3 | 0 | 0 | 1973 | 1973 |
S/G/Y/R/B/O |
NT_009482 | AC055717 | 130071371 | 3 |   |   | AC018873 | 130071371 | | 10215 | 0 | 5079 | 15294 |
S/G/Y/R/B/O |
NT_009482 | AC055717 | 130071371 | 3 |   |   | AC021743 | 130071371 | | 45736 | 3806 | 14446 | 63988 |
S/G/Y/R/B/O |
NT_009482 | AC055717 | 130071371 | 3 |   |   | AC026664 | 130275796 | | 141252 | 6405 | 40956 | 188613 |
S/G/Y/R/B/O |
NT_009482 | AC026339 | 130275796 | 3 | chr12 | NT_009482 | AC026869 | 130328860 | 1 | 23277 | 3115 | 24276 | 50668 |
S/G/Y/R/B/O |
NT_009482 | AC026339 | 130275796 | 3 |   |   | AC021743 | 129878019 | | 47557 | 3869 | 1161 | 52587 |
S/G/Y/R/B/O |
NT_009482 | AC026339 | 130275796 | 3 |   |   | AC135388 | 130071371 | | 26605 | 11079 | 8635 | 46319 |
S/G/Y/R/B/O |
NT_009482 | AC026869 | 130328860 | 1 | chr12 | NT_009482 | AC026336 | 130364950 | 3 | 64495 | 0 | 4304 | 68799 |
S/G/Y/R/B/O |
NT_009482 | AC026869 | 130328860 | 1 |   |   | AC021743 | 130071371 | | 73407 | 15092 | 3208 | 91707 |
S/G/Y/R/B/O |
NT_009482 | AC026869 | 130328860 | 1 |   |   | AC135388 | 130071371 | | 87335 | 15287 | 31346 | 133968 |
S/G/Y/R/B/O |
NT_009482 | AC026336 | 130364950 | 3 | chr12 | NT_009482 | AC026764 | 130534708 | 3 | 2005 | 0 | 0 | 2005 |
S/G/Y/R/B/O |
NT_009482 | AC026336 | 130364950 | 3 |   |   | AC025837 | 130071371 | | 33058 | 6261 | 1213 | 40532 |
S/G/Y/R/B/O |
NT_009482 | AC026336 | 130364950 | 3 |   |   | AC135388 | 130328860 | | 49628 | 0 | 19773 | 69401 |
S/G/Y/R/B/O |
NT_009482 | AC026764 | 130534708 | 3 | chr12 | NT_009482 | AC127071 | 130571033 | 3 | 0 | 0 | 1530 | 1530 |
S/G/Y/R/B/O |
NT_009482 | AC026764 | 130534708 | 3 |   |   | AC025837 | 130328860 | | 17233 | 4413 | 14618 | 36264 |
S/G/Y/R/B/O |
NT_009482 | AC127071 | 130571033 | 3 | chr12 | NT_009482 | AC063926 | 130632598 | 3 | 2004 | 0 | 0 | 2004 |
S/G/Y/R/B/O |
NT_009482 | AC127071 | 130571033 | 3 |   |   | AC025837 | 130571033 | | 61638 | 0 | 1364 | 63002 |
S/G/Y/R/B/O |
NT_009482 | AC063926 | 130632598 | 3 | chr12 | NT_009482 | AC095350 | 130823368 | 1 | 20605 | 0 | 0 | 20605 |
S/G/Y/R/B/O |
NT_009482 | AC063926 | 130632598 | 3 |   |   | AC025837 | 130632598 | | 30467 | 1897 | 0 | 32364 |
S/G/Y/R/B/O |
NT_009482 | AC095350 | 130823368 | 1 | chr12 | NT_009482 | AC073912 | 130948239 | 3 | 15490 | 0 | 0 | 15490 |
S/G/Y/R/B/O |
NT_009482 | AC095350 | 130823368 | 1 |   |   | AC024021 | 130571033 | | 68220 | 2774 | 14564 | 85558 |
S/G/Y/R/B/O |
NT_009482 | AC073912 | 130948239 | 3 | chr12 | NT_009482 | AC073862 | 131159789 | 3 | 0 | 0 | 1543 | 1543 |
S/G/Y/R/B/O |
NT_009482 | AC073912 | 130948239 | 3 |   |   | AC024021 | 130948239 | | 68215 | 0 | 11315 | 79530 |
S/G/Y/R/B/O |
NT_009482 | AC073862 | 131159789 | 3 | chr12 | NT_009482 | AC078925 | 131229311 | 3 | 2004 | 0 | 0 | 2004 |
S/G/Y/R/B/O |
NT_009482 | AC073862 | 131159789 | 3 |   |   | AC073527 | 130823368 | | 10449 | 1748 | 0 | 12197 |
S/G/Y/R/B/O |
NT_009482 | AC078925 | 131229311 | 3 | chr12 | NT_009482 | AC126564 | 131380591 | 3 | 0 | 1994 | 0 | 1994 |
S/G/Y/R/B/O |
NT_009482 | AC078925 | 131229311 | 3 |   |   | AC073527 | 131229311 | | 106116 | 0 | 36164 | 142280 |
S/G/Y/R/B/O |
NT_009482 | AC126564 | 131380591 | 3 | chr12 | NT_009482 | AC092850 | 131499839 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009482 | AC126564 | 131380591 | 3 |   |   | AC073527 | 131380591 | | 11704 | 0 | 0 | 11704 |
S/G/Y/R/B/O |
NT_009482 | AC092850 | 131499839 | 3 |   |   |   |   |   |   |   |   |   |
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