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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_009700 | AC090059 | 19827906 | 1 | chr12 | NT_009700 | AC024901 | 19956930 | 3 | 55523 | 0 | 5027 | 60550 |
S/G/Y/R/B/O |
NT_009700 | AC090059 | 19827906 | 1 |   |   | AC073633 | 19956930 | | 54813 | 0 | 11735 | 66548 |
S/G/Y/R/B/O |
NT_009700 | AC024901 | 19956930 | 3 | chr12 | NT_009700 | AC087237 | 20086568 | 3 | 2002 | 0 | 0 | 2002 |
S/G/Y/R/B/O |
NT_009700 | AC024901 | 19956930 | 3 |   |   | AC073633 | 19956930 | | 29708 | 0 | 88610 | 118318 |
S/G/Y/R/B/O |
NT_009700 | AC024901 | 19956930 | 3 |   |   | AC120459 | 19827906 | | 19074 | 34784 | 18460 | 72318 |
S/G/Y/R/B/O |
NT_009700 | AC087237 | 20086568 | 3 | chr12 | NT_009700 | AC126468 | 20250946 | 3 | 0 | 1384 | 0 | 1384 |
S/G/Y/R/B/O |
NT_009700 | AC087237 | 20086568 | 3 |   |   | AC013259 | 19827906 | | 165774 | 0 | 0 | 165774 |
S/G/Y/R/B/O |
NT_009700 | AC126468 | 20250946 | 3 | chr12 | NT_009700 | AC087587 | 20264555 | 3 | 0 | 1999 | 0 | 1999 |
S/G/Y/R/B/O |
NT_009700 | AC087587 | 20264555 | 3 | chr12 | NT_009700 | AC112914 | 20463397 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC087587 | 20264555 | 3 |   |   | AC010262 | 20264555 | | 134725 | 2304 | 4362 | 141391 |
S/G/Y/R/B/O |
NT_009700 | AC087587 | 20264555 | 3 |   |   | AC016272 | 20264555 | | 11960 | 7372 | 4003 | 23335 |
S/G/Y/R/B/O |
NT_009700 | AC112914 | 20463397 | 3 | chr12 | NT_009700 | AC129102 | 20507803 | 3 | 2005 | 0 | 0 | 2005 |
S/G/Y/R/B/O |
NT_009700 | AC112914 | 20463397 | 3 |   |   | AC010262 | 20250946 | | 50373 | 2300 | 0 | 52673 |
S/G/Y/R/B/O |
NT_009700 | AC112914 | 20463397 | 3 |   |   | AC016272 | 20250946 | | 19570 | 7371 | 13615 | 40556 |
S/G/Y/R/B/O |
NT_009700 | AC129102 | 20507803 | 3 | chr12 | NT_009700 | AC129029 | 20565740 | 3 | 2005 | 0 | 0 | 2005 |
S/G/Y/R/B/O |
NT_009700 | AC129102 | 20507803 | 3 |   |   | AC016272 | 20507803 | | 42190 | 5339 | 0 | 47529 |
S/G/Y/R/B/O |
NT_009700 | AC129029 | 20565740 | 3 | chr12 | NT_009700 | AC112777 | 20686202 | 3 | 2003 | 0 | 0 | 2003 |
S/G/Y/R/B/O |
NT_009700 | AC112777 | 20686202 | 3 | chr12 | NT_009700 | AC092491 | 20844579 | 3 | 2005 | 0 | 0 | 2005 |
S/G/Y/R/B/O |
NT_009700 | AC092491 | 20844579 | 3 | chr12 | NT_009700 | AC011604 | 20945882 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC011604 | 20945882 | 3 | chr12 | NT_009700 | AC087309 | 21119485 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC087309 | 21119485 | 3 | chr12 | NT_009700 | AC022335 | 21262159 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_009700 | AC087309 | 21119485 | 3 |   |   | AC026871 | 21262159 | | 28362 | 0 | 91207 | 119569 |
S/G/Y/R/B/O |
NT_009700 | AC087309 | 21119485 | 3 |   |   | AC026871 | 21262159 | | 28362 | 0 | 91207 | 119569 |
S/G/Y/R/B/O |
NT_009700 | AC022335 | 21262159 | 3 | chr12 | NT_009700 | AC022224 | 21414045 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC022224 | 21414045 | 3 | chr12 | NT_009700 | AC006559 | 21523330 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC006559 | 21523330 | 3 | chr12 | NT_009700 | AC022072 | 21702569 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC022072 | 21702569 | 3 | chr12 | NT_009700 | AC010197 | 21746119 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC010197 | 21746119 | 3 | chr12 | NT_009700 | AC010185 | 21895154 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009700 | AC010185 | 21895154 | 3 | chr12 | NT_009700 | AC008250 | 21932364 | 3 | 0 | 1338 | 0 | 1338 |
S/G/Y/R/B/O |
NT_009700 | AC010185 | 21895154 | 3 |   |   | AC024904 | 21932364 | | 38132 | 0 | 0 | 38132 |
S/G/Y/R/B/O |
NT_009700 | AC008250 | 21932364 | 3 | chr12 | NT_009700 | AC084806 | 22072158 | 3 | 2006 | 0 | 0 | 2006 |
S/G/Y/R/B/O |
NT_009700 | AC008250 | 21932364 | 3 |   |   | AC024904 | 21895154 | | 122709 | 2076 | 0 | 124785 |
S/G/Y/R/B/O |
NT_009700 | AC008250 | 21932364 | 3 |   |   | AC067913 | 21895154 | | 62029 | 3180 | 12173 | 77382 |
S/G/Y/R/B/O |
NT_009700 | AC084806 | 22072158 | 3 | chr12 | NT_009700 | AC092862 | 22137869 | 3 | 2521 | 0 | 0 | 2521 |
S/G/Y/R/B/O |
NT_009700 | AC084806 | 22072158 | 3 |   |   | AC067913 | 21932364 | | 26260 | 4751 | 7513 | 38524 |
S/G/Y/R/B/O |
NT_009700 | AC084806 | 22072158 | 3 |   |   | AC093092 | 22137869 | | 64816 | 0 | 0 | 64816 |
S/G/Y/R/B/O |
NT_009700 | AC092862 | 22137869 | 3 | chr12 | NT_009700 | AC007671 | 22207349 | 3 | 2511 | 0 | 0 | 2511 |
S/G/Y/R/B/O |
NT_009700 | AC092862 | 22137869 | 3 |   |   | AC087313 | 22072158 | | 19441 | 2597 | 13417 | 35455 |
S/G/Y/R/B/O |
NT_009700 | AC092862 | 22137869 | 3 |   |   | AC092822 | 22072158 | | 17106 | 0 | 0 | 17106 |
S/G/Y/R/B/O |
NT_009700 | AC092862 | 22137869 | 3 |   |   | AC092863 | 22072158 | | 11030 | 0 | 0 | 11030 |
S/G/Y/R/B/O |
NT_009700 | AC092862 | 22137869 | 3 |   |   | AC093092 | 22072158 | | 11316 | 0 | 0 | 11316 |
S/G/Y/R/B/O |
NT_009700 | AC007671 | 22207349 | 3 | chr12 | NT_009700 | AC007544 | 22361145 | 3 | 0 | 0 | 203 | 203 |
S/G/Y/R/B/O |
NT_009700 | AC007671 | 22207349 | 3 |   |   | AC087313 | 22361145 | | 100441 | 2329 | 4817 | 107587 |
S/G/Y/R/B/O |
NT_009700 | AC007671 | 22207349 | 3 |   |   | AC093092 | 22137869 | | 10844 | 0 | 0 | 10844 |
S/G/Y/R/B/O |
NT_009700 | AC007544 | 22361145 | 3 | chr12 | NT_009700 | AC087318 | 22479976 | 3 | 0 | 2001 | 0 | 2001 |
S/G/Y/R/B/O |
NT_009700 | AC087318 | 22479976 | 3 |   |   |   |   |   |   |   |   |   |
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