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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_009575 | AC011672 | 93946215 | 1 | chr12 | NT_009575 | AC126172 | 94007875 | 1 | 81125 | 0 | 4017 | 85142 |
S/G/Y/R/B/O |
NT_009575 | AC126172 | 94007875 | 1 | chr12 | NT_009575 | AC124947 | 94117807 | 1 | 25696 | 2611 | 23029 | 51336 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 | chr12 | NT_009575 | AC090050 | 94292732 | 3 | 21499 | 0 | 0 | 21499 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 | chr12 | NT_009575 | AC025260 | 94314232 | 3 | 19325 | 0 | 0 | 19325 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 |   |   | AC021562 | 94117807 | | 73156 | 7793 | 1237 | 82186 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 |   |   | AC021644 | 94117807 | | 14948 | 6808 | 23493 | 45249 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 |   |   | AC023054 | 94117807 | | 19325 | 0 | 0 | 19325 |
S/G/Y/R/B/O |
NT_009575 | AC124947 | 94117807 | 1 |   |   | AC090682 | 94292732 | | 40366 | 3429 | 12900 | 56695 |
S/G/Y/R/B/O |
NT_009575 | AC090050 | 94292732 | 3 | chr12 | NT_009575 | AC025260 | 94314232 | 3 | 2082 | 0 | 0 | 2082 |
S/G/Y/R/B/O |
NT_009575 | AC090050 | 94292732 | 3 |   |   | AC021562 | 94007875 | | 10576 | 0 | 698 | 11274 |
S/G/Y/R/B/O |
NT_009575 | AC025260 | 94314232 | 3 | chr12 | NT_009575 | AC012085 | 94477022 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009575 | AC025260 | 94314232 | 3 | chr12 | NT_009575 | AC124947 | 94117807 | 1 | 19325 | 0 | 0 | 19325 |
S/G/Y/R/B/O |
NT_009575 | AC025260 | 94314232 | 3 |   |   | AC021562 | 141693087 | | 90299 | 5541 | 1253 | 97093 |
S/G/Y/R/B/O |
NT_009575 | AC025260 | 94314232 | 3 |   |   | AC021644 | 141693087 | | 11760 | 8711 | 32966 | 53437 |
S/G/Y/R/B/O |
NT_009575 | AC025260 | 94314232 | 3 |   |   | AC090682 | 94292732 | | 63353 | 0 | 3732 | 67085 |
S/G/Y/R/B/O |
NT_009575 | AC012085 | 94477022 | 3 | chr12 | NT_009575 | AC025261 | 94645282 | 3 | 0 | 2017 | 0 | 2017 |
S/G/Y/R/B/O |
NT_009575 | AC012085 | 94477022 | 3 |   |   | AC026109 | 94645282 | | 54025 | 0 | 0 | 54025 |
S/G/Y/R/B/O |
NT_009575 | AC025261 | 94645282 | 3 | chr12 | NT_009575 | AC012464 | 94752066 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_009575 | AC025261 | 94645282 | 3 |   |   | AC023589 | 94752066 | | 75569 | 4726 | 8448 | 88743 |
S/G/Y/R/B/O |
NT_009575 | AC025261 | 94645282 | 3 |   |   | AC090504 | 94752066 | | 89625 | 0 | 0 | 89625 |
S/G/Y/R/B/O |
NT_009575 | AC012464 | 94752066 | 3 | chr12 | NT_009575 | AC093026 | 94923833 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_009575 | AC012464 | 94752066 | 3 |   |   | AC011844 | 94752066 | | 49559 | 3956 | 5375 | 58890 |
S/G/Y/R/B/O |
NT_009575 | AC012464 | 94752066 | 3 |   |   | AC016800 | 94752066 | | 12658 | 19999 | 2471 | 35128 |
S/G/Y/R/B/O |
NT_009575 | AC012464 | 94752066 | 3 |   |   | AC023589 | 94752066 | | 50370 | 0 | 6689 | 57059 |
S/G/Y/R/B/O |
NT_009575 | AC012464 | 94752066 | 3 |   |   | AC090504 | 94645282 | | 86188 | 0 | 0 | 86188 |
S/G/Y/R/B/O |
NT_009575 | AC093026 | 94923833 | 3 | chr12 | NT_009575 | AC128679 | 95036301 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_009575 | AC093026 | 94923833 | 3 |   |   | AC011844 | 94645282 | | 74983 | 2103 | 669 | 77755 |
S/G/Y/R/B/O |
NT_009575 | AC093026 | 94923833 | 3 |   |   | AC016800 | 94645282 | | 25316 | 18186 | 11114 | 54616 |
S/G/Y/R/B/O |
NT_009575 | AC093026 | 94923833 | 3 |   |   | AC021340 | 94645282 | | 43751 | 0 | 0 | 43751 |
S/G/Y/R/B/O |
NT_009575 | AC128679 | 95036301 | 3 | chr12 | NT_009575 | AC123567 | 95045482 | 3 | 2003 | 0 | 0 | 2003 |
S/G/Y/R/B/O |
NT_009575 | AC128679 | 95036301 | 3 |   |   | AC021340 | 95036301 | | 10704 | 0 | 0 | 10704 |
S/G/Y/R/B/O |
NT_009575 | AC128679 | 95036301 | 3 |   |   | AC126173 | 95045482 | | 11157 | 0 | 0 | 11157 |
S/G/Y/R/B/O |
NT_009575 | AC123567 | 95045482 | 3 | chr12 | NT_009575 | AC073655 | 95158278 | 3 | 0 | 1983 | 0 | 1983 |
S/G/Y/R/B/O |
NT_009575 | AC123567 | 95045482 | 3 |   |   | AC021340 | 95045482 | | 96767 | 0 | 14346 | 111113 |
S/G/Y/R/B/O |
NT_009575 | AC073655 | 95158278 | 3 | chr12 | NT_009575 | AC068779 | 95344394 | 3 | 2005 | 0 | 0 | 2005 |
S/G/Y/R/B/O |
NT_009575 | AC068779 | 95344394 | 3 | chr12 | NT_009575 | AC023161 | 95404004 | 3 | 0 | 449 | 0 | 449 |
S/G/Y/R/B/O |
NT_009575 | AC023161 | 95404004 | 3 | chr12 | NT_009575 | AC026672 | 95480347 | 3 | 0 | 1993 | 0 | 1993 |
S/G/Y/R/B/O |
NT_009575 | AC026672 | 95480347 | 3 | chr12 | NT_009575 | AC117494 | 95708734 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_009575 | AC117494 | 95708734 | 3 | chr12 | NT_009575 | AC132009 | 95811779 | 3 | 2399 | 0 | 0 | 2399 |
S/G/Y/R/B/O |
NT_009575 | AC132009 | 95811779 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009575 | AC132009 | 95811779 | 3 |   |   | AC009781 | 95811779 | | 24128 | 0 | 0 | 24128 |
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