Chromosome 12 - Clone Overlaps

Chromosome 12 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037806	NT_009759	NT_033253	NT_009731	NT_035206	NT_024397	NT_009714	NT_035211
NT_009700	NT_035212	NT_033254	NT_033255	NT_024371	NT_024380	NT_024352	NT_009781
NT_009526	NT_026397	NT_024417	NT_009782	NT_009609	NT_030118	NT_009458	NT_009509
NT_009441	NT_009711	NT_035222	NT_009616	NT_029419	NT_009540	NT_009528	NT_024381
NT_024460	NT_024375	NT_015310	NT_009551	NT_019546	NT_024356	NT_009538	NT_025864
NT_037807	NT_030122	NT_019555	NT_009513	NT_009575	NT_009681	NT_009743	NT_037808
NT_035235	NT_009770	NT_009775	NT_037809	NT_037810	NT_009487	NT_009438	NT_009464
NT_033248	NT_037811	NT_009755	NT_009534	NT_024376	NT_009523	NT_035242	NT_009482
NT_035243	NT_027131	NT_024477	NT_009455

NT_035212

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_035212	AC053513	22592617	3	chr12	NT_035212	AC087241	22748575	3	0	1797	0	1797
S/G/Y/R/B/O	NT_035212	AC053513	22592617	3			AC027624	22361145		25660	3133	0	28793
S/G/Y/R/B/O	NT_035212	AC087241	22748575	3	chr12	NT_035212	AC084819	22892761	3	0	2005	0	2005
S/G/Y/R/B/O	NT_035212	AC087241	22748575	3			AC023988	22748575		72124	4687	14600	91411
S/G/Y/R/B/O	NT_035212	AC087241	22748575	3			AC027624	22748575		126308	0	6523	132831
S/G/Y/R/B/O	NT_035212	AC087241	22748575	3			AC108708	22892761		115826	0	0	115826
S/G/Y/R/B/O	NT_035212	AC084819	22892761	3	chr12	NT_035212	AC084816	22937285	3	0	0	1720	1720
S/G/Y/R/B/O	NT_035212	AC084819	22892761	3			AC023988	22892761		19600	8614	5506	33720
S/G/Y/R/B/O	NT_035212	AC084819	22892761	3			AC084861	22937285		24700	0	2289	26989
S/G/Y/R/B/O	NT_035212	AC084819	22892761	3			AC108708	22748575		27916	0	0	27916
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3	chr12	NT_035212	AC087310	23083403	3	2000	0	0	2000
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3			AC009923	22748575		80635	1769	29837	112241
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3			AC023988	22748575		16660	2877	6426	25963
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3			AC025803	22748575		15646	0	0	15646
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3			AC084861	22892761		29245	4522	31586	65353
S/G/Y/R/B/O	NT_035212	AC084816	22937285	3			AC087585	23083403		28019	0	6471	34490
S/G/Y/R/B/O	NT_035212	AC087310	23083403	3	chr12	NT_035212	AC087258	23190970	3	2000	0	0	2000
S/G/Y/R/B/O	NT_035212	AC087310	23083403	3			AC025803	23083403		99626	0	0	99626
S/G/Y/R/B/O	NT_035212	AC087310	23083403	3			AC076960	23083403		32527	0	15864	48391
S/G/Y/R/B/O	NT_035212	AC087310	23083403	3			AC087585	23190970		30863	0	21936	52799
S/G/Y/R/B/O	NT_035212	AC087258	23190970	3	chr12	NT_035212	AC087235	23315988	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC087258	23190970	3			AC021048	23190970		16496	8064	3591	28151
S/G/Y/R/B/O	NT_035212	AC087258	23190970	3			AC025803	23190970		29692	2129	149	31970
S/G/Y/R/B/O	NT_035212	AC087258	23190970	3			AC076960	23190970		50678	0	10559	61237
S/G/Y/R/B/O	NT_035212	AC087235	23315988	3	chr12	NT_035212	AC092831	23469597	3	2004	0	0	2004
S/G/Y/R/B/O	NT_035212	AC087235	23315988	3			AC021048	23083403		22787	9329	15921	48037
S/G/Y/R/B/O	NT_035212	AC092831	23469597	3	chr12	NT_035212	AC087244	23601514	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC092831	23469597	3			AC016294	23469597		18652	0	3576	22228
S/G/Y/R/B/O	NT_035212	AC092831	23469597	3			AC129103	23315988		65303	0	0	65303
S/G/Y/R/B/O	NT_035212	AC087244	23601514	3	chr12	NT_035212	AC087260	23788625	3	58490	0	0	58490
S/G/Y/R/B/O	NT_035212	AC087244	23601514	3			AC016294	23315988		48423	1826	6527	56776
S/G/Y/R/B/O	NT_035212	AC087244	23601514	3			AC022359	23315988		49983	0	6099	56082
S/G/Y/R/B/O	NT_035212	AC087260	23788625	3	chr12	NT_035212	AC092864	23904934	3	2005	0	0	2005
S/G/Y/R/B/O	NT_035212	AC087260	23788625	3			AC022359	23788625		104132	1965	32575	138672
S/G/Y/R/B/O	NT_035212	AC092864	23904934	3	chr12	NT_035212	AC087319	23962821	3	0	0	1863	1863
S/G/Y/R/B/O	NT_035212	AC087319	23962821	3	chr12	NT_035212	AC112915	24118820	3	2000	0	0	2000
S/G/Y/R/B/O	NT_035212	AC112915	24118820	3	chr12	NT_035212	AC090675	24144565	3	0	1982	0	1982
S/G/Y/R/B/O	NT_035212	AC090675	24144565	3	chr12	NT_035212	AC087322	24315229	3	0	1383	0	1383
S/G/Y/R/B/O	NT_035212	AC090675	24144565	3			AC026134	24144565		132944	3955	18497	155396
S/G/Y/R/B/O	NT_035212	AC087322	24315229	3	chr12	NT_035212	AC069208	24381230	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC069208	24381230	3	chr12	NT_035212	AC092830	24546508	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC069208	24381230	3			AC034120	24144565		71429	12544	3351	87324
S/G/Y/R/B/O	NT_035212	AC092830	24546508	3	chr12	NT_035212	AC087312	24711477	3	31503	0	0	31503
S/G/Y/R/B/O	NT_035212	AC092830	24546508	3			AC034120	24144565		56194	4635	1438	62267
S/G/Y/R/B/O	NT_035212	AC087312	24711477	3	chr12	NT_035212	AC093194	24828465	3	0	2006	0	2006
S/G/Y/R/B/O	NT_035212	AC087312	24711477	3			AC024025	24711477		54249	1649	10886	66784
S/G/Y/R/B/O	NT_035212	AC093194	24828465	3	chr12	NT_035212	AC023796	24847839	3	2000	0	0	2000
S/G/Y/R/B/O	NT_035212	AC023796	24847839	3	chr12	NT_035212	AC092867	25019181	3	149165	0	0	149165
S/G/Y/R/B/O	NT_035212	AC023796	24847839	3			AC024025	24711477		49139	4072	0	53211
S/G/Y/R/B/O	NT_035212	AC092867	25019181	3	chr12	NT_035212	AC026310	25065259	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC092867	25019181	3			AC024025	24847839		25080	2387	3228	30695
S/G/Y/R/B/O	NT_035212	AC026310	25065259	3	chr12	NT_035212	AC023510	25149406	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC026310	25065259	3			AC025889	24847839		38912	0	740	39652
S/G/Y/R/B/O	NT_035212	AC023510	25149406	3	chr12	NT_035212	AC092794	25302224	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC023510	25149406	3			AC025889	24847839		82870	3692	19429	105991
S/G/Y/R/B/O	NT_035212	AC092794	25302224	3	chr12	NT_035212	AC087239	25392253	3	2000	0	0	2000
S/G/Y/R/B/O	NT_035212	AC092794	25302224	3			AC025889	24847839		10982	1136	784	12902
S/G/Y/R/B/O	NT_035212	AC087239	25392253	3	chr12	NT_035212	AC092451	25568258	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC087239	25392253	3			AC024445	25392253		50686	2388	0	53074
S/G/Y/R/B/O	NT_035212	AC092451	25568258	3	chr12	NT_035212	AC022367	25640558	3	2005	0	0	2005
S/G/Y/R/B/O	NT_035212	AC092451	25568258	3			AC024445	25640558		10385	0	10445	20830
S/G/Y/R/B/O	NT_035212	AC022367	25640558	3	chr12	NT_035212	AC094009	25813737	3	2002	0	0	2002
S/G/Y/R/B/O	NT_035212	AC022367	25640558	3			AC024445	25640558		39202	0	0	39202
S/G/Y/R/B/O	NT_035212	AC022367	25640558	3			AC044811	25640558		20583	4878	6442	31903
S/G/Y/R/B/O	NT_035212	AC094009	25813737	3	chr12	NT_035212	AC019209	25858415	3	2002	0	0	2002
S/G/Y/R/B/O	NT_035212	AC094009	25813737	3			AC044811	25640558		43491	2258	0	45749
S/G/Y/R/B/O	NT_035212	AC019209	25858415	3	chr12	NT_035212	AC024225	26051229	3	0	1999	0	1999
S/G/Y/R/B/O	NT_035212	AC019209	25858415	3			AC021868	25640558		168213	0	0	168213
S/G/Y/R/B/O	NT_035212	AC019209	25858415	3			AC044811	26051229		12457	0	4753	17210
S/G/Y/R/B/O	NT_035212	AC019209	25858415	3			AC087256	26051229		149543	0	0	149543
S/G/Y/R/B/O	NT_035212	AC024225	26051229	3	chr12	NT_035212	AC055707	26108437	3	2020	0	0	2020
S/G/Y/R/B/O	NT_035212	AC024225	26051229	3			AC025637	25858415		30278	10092	1040	41410
S/G/Y/R/B/O	NT_035212	AC055707	26108437	3	chr12	NT_035212	AC022509	26244784	3	0	0	0	0
S/G/Y/R/B/O	NT_035212	AC055707	26108437	3			AC025637	26051229		47113	2191	8688	57992
S/G/Y/R/B/O	NT_035212	AC022509	26244784	3	chr12	NT_035212	AC055720	26447015	3	0	0	204	204
S/G/Y/R/B/O	NT_035212	AC055720	26447015	3	chr12	NT_035212	AC024145	26543480	3	2008	0	0	2008
S/G/Y/R/B/O	NT_035212	AC024145	26543480	3	chr12	NT_035212	AC023425	26617243	3	0	1977	0	1977
S/G/Y/R/B/O	NT_035212	AC024145	26543480	3			AC026862	26617243		25071	1494	4356	30921
S/G/Y/R/B/O	NT_035212	AC023425	26617243	3	chr12	NT_035212	AC023051	26797091	3	5606	0	0	5606
S/G/Y/R/B/O	NT_035212	AC023425	26617243	3			AC026862	26543480		38789	14528	43470	96787
S/G/Y/R/B/O	NT_035212	AC023051	26797091	3	chr12	NT_035212	AC024093	26977415	3	0	2002	0	2002
S/G/Y/R/B/O	NT_035212	AC023051	26797091	3			AC018393	26543480		126975	1523	24698	153196
S/G/Y/R/B/O	NT_035212	AC024093	26977415	3	chr12	NT_035212	AC024896	27124282	3	2002	0	0	2002
S/G/Y/R/B/O	NT_035212	AC024093	26977415	3			AC023261	26797091		19702	1810	0	21512
S/G/Y/R/B/O	NT_035212	AC024896	27124282	3	chr12	NT_035212	AC092747	27180696	3	2005	0	0	2005
S/G/Y/R/B/O	NT_035212	AC024896	27124282	3			AC023261	27124282		53958	0	0	53958
S/G/Y/R/B/O	NT_035212	AC092747	27180696	3	chr12	NT_035212	AC092827	27341091	3	0	1998	0	1998
S/G/Y/R/B/O	NT_035212	AC092747	27180696	3			AC023261	27180696		54074	4730	20429	79233
S/G/Y/R/B/O	NT_035212	AC092747	27180696	3			AC025970	27124282		94961	0	25506	120467
S/G/Y/R/B/O	NT_035212	AC092827	27341091	3	chr12	NT_035212	AC092829	27456727	3	2007	0	0	2007
S/G/Y/R/B/O	NT_035212	AC092827	27341091	3			AC021737	27341091		48178	0	0	48178
S/G/Y/R/B/O	NT_035212	AC092827	27341091	3			AC092453	27341091		48287	0	0	48287
S/G/Y/R/B/O	NT_035212	AC092829	27456727	3
S/G/Y/R/B/O	NT_035212	AC092829	27456727	3			AC016008	27456727		31098	0	0	31098
S/G/Y/R/B/O	NT_035212	AC092829	27456727	3			AC021737	27456727		75464	4399	4793	84656
S/G/Y/R/B/O	NT_035212	AC092829	27456727	3			AC092453	27456727		114501	0	0	114501