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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_004525
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004525AC0249982196387621chr1NT_004525AL365438219641785134820170751841170306
S/G/Y/R/B/O NT_004525AC0249982196387621  AC0682902193586382715184451289048486
S/G/Y/R/B/O NT_004525AL3654382196417851chr1NT_004525AC0965422197728873392940039294
S/G/Y/R/B/O NT_004525AL3654382196417851chr1NT_034471AL732372131819801686435062
S/G/Y/R/B/O NT_004525AL3654382196417851chr1NT_034471AL732372131819801686435062
S/G/Y/R/B/O NT_004525AL3654382196417851  AC021798126728376178010017801
S/G/Y/R/B/O NT_004525AC0965422197728873chr1NT_004525AC0990652198923483696580069658
S/G/Y/R/B/O NT_004525AC0965422197728873  AC02179823084117655575039620163025
S/G/Y/R/B/O NT_004525AC0990652198923483chr1NT_004525AL39012222008508030000
S/G/Y/R/B/O NT_004525AC0990652198923483  AC0217982196417856116615441862781337
S/G/Y/R/B/O NT_004525AL3901222200850803chr1NT_004525AC09280922018054732623002623
S/G/Y/R/B/O NT_004525AL3901222200850803  AC068290219638762460385036947360547
S/G/Y/R/B/O NT_004525AC0928092201805473chr1NT_004525AC09979022037554413676003676
S/G/Y/R/B/O NT_004525AC0928092201805473  AC068290219638762527452775055520
S/G/Y/R/B/O NT_004525AC0997902203755441chr1NT_004525AC09653722055699830000
S/G/Y/R/B/O NT_004525AC0965372205569983chr1NT_004525AL59633022067473732342002342
S/G/Y/R/B/O NT_004525AC0965372205569983  AC02623522018054715311100153111
S/G/Y/R/B/O NT_004525AC0965372205569983  AC02623522018054715311100153111
S/G/Y/R/B/O NT_004525AL5963302206747373chr1NT_004525AL39181122075439430199801998
S/G/Y/R/B/O NT_004525AL5963302206747373  AC012126220674737682642120700977393
S/G/Y/R/B/O NT_004525AL5963302206747373  AC034298220674737508604678055538
S/G/Y/R/B/O NT_004525AL3918112207543943chr1NT_004525AC09356022090281930000
S/G/Y/R/B/O NT_004525AL3918112207543943  AC01212622075439427224839774535808
S/G/Y/R/B/O NT_004525AL3918112207543943  AC034298220754394863431336818397118108
S/G/Y/R/B/O NT_004525AC0935602209028193chr1NT_004525AL59054722101136730017501750
S/G/Y/R/B/O NT_004525AC0935602209028193  AC0342982206747373363268852067761194
S/G/Y/R/B/O NT_004525AL5905472210113673chr1NT_004525AL64576922107048630000
S/G/Y/R/B/O NT_004525AL5905472210113673  AC022922221011367304902933033423
S/G/Y/R/B/O NT_004525AL5905472210113673  AC027498221011367206060020606
S/G/Y/R/B/O NT_004525AL6457692210704863chr1NT_004525AL35791222109420530000
S/G/Y/R/B/O NT_004525AL3579122210942053chr1NT_004525AL16273822122226230000
S/G/Y/R/B/O NT_004525AL3579122210942053  AC027498220902819104380010438
S/G/Y/R/B/O NT_004525AL1627382212222623chr1NT_004525AL59613422134199032000002000
S/G/Y/R/B/O NT_004525AL1627382212222623  AC0270732209028193233123792039555105
S/G/Y/R/B/O NT_004525AL5961342213419903chr1NT_004525AC09281122134591232000002000
S/G/Y/R/B/O NT_004525AC0928112213459123chr1NT_004525AL35621622153653032000002000
S/G/Y/R/B/O NT_004525AC0928112213459123  AC027073221222262300610105831119
S/G/Y/R/B/O NT_004525AL3562162215365303chr1NT_004525AL59138022160608730000
S/G/Y/R/B/O NT_004525AL5913802216060873chr1NT_004525AC09906622167428930194101941
S/G/Y/R/B/O NT_004525AL5913802216060873  AC021778221345912305163512608540113
S/G/Y/R/B/O NT_004525AL5913802216060873  AC025060221345912359856782288545652
S/G/Y/R/B/O NT_004525AL5913802216060873  AL160005221674289413742675559049639
S/G/Y/R/B/O NT_004525AL5913802216060873  AL513528221674289423360042336
S/G/Y/R/B/O NT_004525AC0990662216742893chr1NT_004525AL59189522182183732000002000
S/G/Y/R/B/O NT_004525AC0990662216742893  AC0217782216742896270401758980293
S/G/Y/R/B/O NT_004525AC0990662216742893  AC0250602216742892112698341395944919
S/G/Y/R/B/O NT_004525AC0990662216742893  AC058782221674289164300016430
S/G/Y/R/B/O NT_004525AL5918952218218373chr1NT_004525AL11734822185434430199801998
S/G/Y/R/B/O NT_004525AL5918952218218373  AC058782221821837350770035077
S/G/Y/R/B/O NT_004525AL1173482218543443chr1NT_004525AL13328822198008030000
S/G/Y/R/B/O NT_004525AL1173482218543443  AC058782221854344804360458785023
S/G/Y/R/B/O NT_004525AL1332882219800803chr1NT_004525AL51234322203165730000
S/G/Y/R/B/O NT_004525AL5123432220316573chr1NT_004525AL59204522213474410000
S/G/Y/R/B/O NT_004525AL5123432220316573  AC0448252218218371398979232278144693
S/G/Y/R/B/O NT_004525AL5920452221347441chr1NT_004525AL35974222223143830000
S/G/Y/R/B/O NT_004525AL3597422222314383chr1NT_004525AL35970422231763430199901999
S/G/Y/R/B/O NT_004525AL3597422222314383  AL671974222317634749740074974
S/G/Y/R/B/O NT_004525AL3597042223176343chr1NT_004525AL35712222248713532000002000
S/G/Y/R/B/O NT_004525AL3597042223176343  AC021762222317634334320033432
S/G/Y/R/B/O NT_004525AL3597042223176343  AC026277222317634347680034768
S/G/Y/R/B/O NT_004525AL3597042223176343  AC07383022231763463608952142711115840
S/G/Y/R/B/O NT_004525AL3597042223176343  AL359982222231438334544861038315
S/G/Y/R/B/O NT_004525AL3597042223176343  AL671974222231438846350084635
S/G/Y/R/B/O NT_004525AL3571222224871353chr1NT_004525AL36544422254079232000002000
S/G/Y/R/B/O NT_004525AL3571222224871353  AC021762222231438551060055106
S/G/Y/R/B/O NT_004525AL3571222224871353  AC026277222231438555610055561
S/G/Y/R/B/O NT_004525AL3571222224871353  AL359982222317634288990421933118
S/G/Y/R/B/O NT_004525AL3654442225407923chr1NT_004525AL35973222271993630199001990
S/G/Y/R/B/O NT_004525AL3654442225407923  AC026277222540792615540061554
S/G/Y/R/B/O NT_004525AL3654442225407923  AC0732522225407921088361105137022156909
S/G/Y/R/B/O NT_004525AL3654442225407923  AL3599822227199365275299941607978825
S/G/Y/R/B/O NT_004525AL3597322227199363chr1NT_004525AL39162822281136232006002006
S/G/Y/R/B/O NT_004525AL3916282228113623chr1NT_004525AL35368922287226232001002001
S/G/Y/R/B/O NT_004525AL3536892228722623chr1NT_004525AL45104722306609010000
S/G/Y/R/B/O NT_004525AL4510472230660901chr1NT_004525AL6273082231330023659840065984
S/G/Y/R/B/O NT_004525AL6273082231330023chr1NT_004525AL60646222325715830199801998
S/G/Y/R/B/O NT_004525AL6064622232571583chr1NT_004525AL45105422336755930199901999
S/G/Y/R/B/O NT_004525AL4510542233675593chr1NT_004525AL59231022351112630199901999
S/G/Y/R/B/O NT_004525AL4510542233675593  AL512842223133002731420073142
S/G/Y/R/B/O NT_004525AL5923102235111263chr1NT_004525AL13637822362226630018621862
S/G/Y/R/B/O NT_004525AL1363782236222663chr1NT_004525AL73170222370492330199901999
S/G/Y/R/B/O NT_004525AL1363782236222663  AL714029223511126369810036981
S/G/Y/R/B/O NT_004525AL7317022237049233chr1NT_004525AL35632322374771030000
S/G/Y/R/B/O NT_004525AL7317022237049233  AL714029223622266376272423040050
S/G/Y/R/B/O NT_004525AL3563232237477103chr1NT_004525AL36026922378171332000002000
S/G/Y/R/B/O NT_004525AL3602692237817133chr1NT_004525AL13637922392141630018871887
S/G/Y/R/B/O NT_004525AL3602692237817133  AC004916223781713678980067898
S/G/Y/R/B/O NT_004525AL1363792239214163chr1NT_004525AL35951022404723230000
S/G/Y/R/B/O NT_004525AL1363792239214163  AC004916219641785629300062930
S/G/Y/R/B/O NT_004525AL3595102240472323chr1NT_004525AL35359322414097730199101991
S/G/Y/R/B/O NT_004525AL3535932241409773chr1NT_004525AL67072922427293230199801998
S/G/Y/R/B/O NT_004525AL3535932241409773  AC023889224140977734420243975881
S/G/Y/R/B/O NT_004525AL6707292242729323chr1NT_004525AL13928822433509630199901999
S/G/Y/R/B/O NT_004525AL6707292242729323  AC0238892242729322077101093831709
S/G/Y/R/B/O NT_004525AL1392882243350963         
S/G/Y/R/B/O NT_004525AL1392882243350963  AC023889224140977270170027017