Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_034410
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_034410AL5133431990343463chr1NT_034410AC11440219912308432000002000
S/G/Y/R/B/O NT_034410AL5133431990343463  AL3902071991230844648712912419963598
S/G/Y/R/B/O NT_034410AC1144021991230843chr1NT_034410AC118554199300392306410641
S/G/Y/R/B/O NT_034410AC1144021991230843  AL390207199300392424724285046757
S/G/Y/R/B/O NT_034410AC1185541993003923chr1NT_034410AC09664519933407038623008623
S/G/Y/R/B/O NT_034410AC0966451993340703chr1NT_034410AL59214619949330230191001910
S/G/Y/R/B/O NT_034410AC0966451993340703  AC073251199123084125063186294218634
S/G/Y/R/B/O NT_034410AL5921461994933023chr1NT_034410AL59211419959316432000002000
S/G/Y/R/B/O NT_034410AL5921461994933023  AC0732511994933025723650232252284781
S/G/Y/R/B/O NT_034410AL5921141995931643chr1NT_034410AL60648919978018730399603996
S/G/Y/R/B/O NT_034410AL5921141995931643  AC048369199593164135500013550
S/G/Y/R/B/O NT_034410AL5921141995931643  AC073251199593164134641172598720623
S/G/Y/R/B/O NT_034410AL5921141995931643  AL62720219978018715663300156633
S/G/Y/R/B/O NT_034410AL5921141995931643  AL62720219978018715663300156633
S/G/Y/R/B/O NT_034410AL6064891997801873chr1NT_034410AL51230619994326334000004000
S/G/Y/R/B/O NT_034410AL6064891997801873  AC021462199780187368723266708047218
S/G/Y/R/B/O NT_034410AL6064891997801873  AC021462199780187368723266708047218
S/G/Y/R/B/O NT_034410AL6064891997801873  AC0483691997801872206581003053410284098
S/G/Y/R/B/O NT_034410AL6064891997801873  AC0483691997801872206581003053410284098
S/G/Y/R/B/O NT_034410AL6064891997801873  AL450424199780187710342041238204129650
S/G/Y/R/B/O NT_034410AL6064891997801873  AL450424199780187710342041238204129650
S/G/Y/R/B/O NT_034410AL6064891997801873  AL62720219959316434789000347890
S/G/Y/R/B/O NT_034410AL6064891997801873  AL62720219959316434789000347890
S/G/Y/R/B/O NT_034410AL6064891997801873  AL62720219959316434789000347890
S/G/Y/R/B/O NT_034410AL6064891997801873  AL62720219959316434789000347890
S/G/Y/R/B/O NT_034410AL5123061999432633chr1NT_034410AL16179320007724730199901999
S/G/Y/R/B/O NT_034410AL5123061999432633  AC02146219959316411119769967160125353
S/G/Y/R/B/O NT_034410AL5123061999432633  AL450424200077247467292943642856100
S/G/Y/R/B/O NT_034410AL1617932000772473chr1NT_034410AC0966752002375923647030064703
S/G/Y/R/B/O NT_034410AL1617932000772473  AL35548620023759290825648013166110471
S/G/Y/R/B/O NT_034410AC0966752002375923chr1NT_034410AL39182220034334230200002000
S/G/Y/R/B/O NT_034410AC0966752002375923  AL3554862000772471974520191464536409
S/G/Y/R/B/O NT_034410AL3918222003433423chr1NT_034410AL58383220045663430198101981
S/G/Y/R/B/O NT_034410AL3918222003433423  AC0183732003433425433604372298058
S/G/Y/R/B/O NT_034410AL3918222003433423  AL359927200237592641810064181
S/G/Y/R/B/O NT_034410AL5838322004566343chr1NT_034410AC09342220053963130251702517
S/G/Y/R/B/O NT_034410AL5838322004566343  AC018373200456634776940077694
S/G/Y/R/B/O NT_034410AL5838322004566343  AL3599272005396313301902253655555
S/G/Y/R/B/O NT_034410AC0934222005396313chr1NT_034410AC0989332007181483507760050776
S/G/Y/R/B/O NT_034410AC0989332007181483chr1NT_034410AC0989362008467193701670070167
S/G/Y/R/B/O NT_034410AC0989332007181483  AC018711200456634578190057819
S/G/Y/R/B/O NT_034410AC0989362008467193chr1NT_034410AL3571312009278751869250086925
S/G/Y/R/B/O NT_034410AL3571312009278751chr1NT_034410AC0965332009689263438890043889
S/G/Y/R/B/O NT_034410AC0965332009689263chr1NT_034410AC1196732011035553286310028631
S/G/Y/R/B/O NT_034410AC0965332009689263  AL359702200927875163152425561924359
S/G/Y/R/B/O NT_034410AC1196732011035553chr1NT_034410AL71396520129167430000
S/G/Y/R/B/O NT_034410AC1196732011035553  AL359702200968926102450740643880153736
S/G/Y/R/B/O NT_034410AL7139652012916743