Chromosome 1 - Clone Overlaps

Chromosome 1 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_034471	NT_037484	NT_004350	NT_004321	NT_004547	NT_034374	NT_022058	NT_021917
NT_028054	NT_032967	NT_021937	NT_004873	NT_030584	NT_029218	NT_004610	NT_004391
NT_004782	NT_037485	NT_028053	NT_004538	NT_034379	NT_037486	NT_034429	NT_004511
NT_037487	NT_004852	NT_032977	NT_029223	NT_029865	NT_004636	NT_032948	NT_004464
NT_034383	NT_004483	NT_037488	NT_004902	NT_034385	NT_026943	NT_034386	NT_029231
NT_004658	NT_004686	NT_037489	NT_021979	NT_034389	NT_037490	NT_034392	NT_028050
NT_030567	NT_021977	NT_029860	NT_037491	NT_019273	NT_004754	NT_022052	NT_022071
NT_004434	NT_037492	NT_037493	NT_037494	NT_034398	NT_034400	NT_034401	NT_034402
NT_034403	NT_037495	NT_032962	NT_037496	NT_021907	NT_037497	NT_004858	NT_037498
NT_004668	NT_037499	NT_029874	NT_004487	NT_037500	NT_021905	NT_004671	NT_029862
NT_034408	NT_034409	NT_037501	NT_034410	NT_034411	NT_021877	NT_034412	NT_004612
NT_037503	NT_021953	NT_004861	NT_004525	NT_004559	NT_031728	NT_021973	NT_004753
NT_004433	NT_030561	NT_004836	NT_004734	NT_004536	NT_032964	NT_037504	NT_037505
NT_031730	NT_029870	NT_032969	NT_032968

NT_004668

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_004668	AL138899	153823531	3	chr1	NT_004668	AL121986	153957668	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL138899	153823531	3			AB045357	153616833		80292	0	0	80292
S/G/Y/R/B/O	NT_004668	AL138899	153823531	3			AC025403	153616833		18111	6898	4886	29895
S/G/Y/R/B/O	NT_004668	AL121986	153957668	3	chr1	NT_004668	AL365440	154124402	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL121986	153957668	3			AC024654	153957668		38044	0	0	38044
S/G/Y/R/B/O	NT_004668	AL365440	154124402	3	chr1	NT_004668	AL160283	154251256	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL365440	154124402	3			AB045359	154124402		126860	0	0	126860
S/G/Y/R/B/O	NT_004668	AL365440	154124402	3			AC024654	154124402		16407	0	15950	32357
S/G/Y/R/B/O	NT_004668	AL160283	154251256	3	chr1	NT_004668	AL353894	154287708	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL160283	154251256	3			AB045359	154251256		36458	0	0	36458
S/G/Y/R/B/O	NT_004668	AL160283	154251256	3			AB045360	154251256		21037	0	0	21037
S/G/Y/R/B/O	NT_004668	AL353894	154287708	3	chr1	NT_004668	AL513205	154398378	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004668	AL353894	154287708	3			AB045360	154124402		112120	0	0	112120
S/G/Y/R/B/O	NT_004668	AL353894	154287708	3			AC010814	154124402		25287	0	0	25287
S/G/Y/R/B/O	NT_004668	AL513205	154398378	3	chr1	NT_004668	AL513208	154577373	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL513205	154398378	3			AB045360	154398378		33684	0	0	33684
S/G/Y/R/B/O	NT_004668	AL513205	154398378	3			AB045361	154398378		146897	0	0	146897
S/G/Y/R/B/O	NT_004668	AL513205	154398378	3			AC010814	154398378		112175	0	10970	123145
S/G/Y/R/B/O	NT_004668	AL513208	154577373	3	chr1	NT_004668	AL359753	154607189	3	0	1980	0	1980
S/G/Y/R/B/O	NT_004668	AL513208	154577373	3			AB045362	154577373		26188	0	0	26188
S/G/Y/R/B/O	NT_004668	AL359753	154607189	3	chr1	NT_004668	AL451134	154785934	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL359753	154607189	3			AB045364	154398378		30812	0	0	30812
S/G/Y/R/B/O	NT_004668	AL451134	154785934	3	chr1	NT_004668	AL035403	154833283	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL035403	154833283	3	chr1	NT_004668	AL513323	154950230	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL035403	154833283	3			AB045364	154607189		61682	0	0	61682
S/G/Y/R/B/O	NT_004668	AL035403	154833283	3			AB045365	154607189		57173	0	0	57173
S/G/Y/R/B/O	NT_004668	AL513323	154950230	3	chr1	NT_004668	AL663023	155116569	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL663023	155116569	3	chr1	NT_004668	AL606752	155200676	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL606752	155200676	3	chr1	NT_004668	AL445528	155285810	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL606752	155200676	3			AC016787	154607189		37824	0	665	38489
S/G/Y/R/B/O	NT_004668	AL445528	155285810	3	chr1	NT_004668	AL590560	155479084	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL445528	155285810	3			AC016787	155285810		60296	4042	0	64338
S/G/Y/R/B/O	NT_004668	AL445528	155285810	3			AL359843	155285810		65352	1944	8250	75546
S/G/Y/R/B/O	NT_004668	AL590560	155479084	3	chr1	NT_004668	AL513485	155615946	3	0	1996	0	1996
S/G/Y/R/B/O	NT_004668	AL513485	155615946	3	chr1	NT_004668	AL513302	155694344	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL513485	155615946	3			AL357565	155615946		76112	0	0	76112
S/G/Y/R/B/O	NT_004668	AL513302	155694344	3	chr1	NT_004668	AL121987	155749281	3	0	0	1675	1675
S/G/Y/R/B/O	NT_004668	AL513302	155694344	3			AL357565	155749281		55441	0	0	55441
S/G/Y/R/B/O	NT_004668	AL121987	155749281	3	chr1	NT_004668	AL139011	155918115	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL121987	155749281	3			AL357565	155918115		18614	0	5754	24368
S/G/Y/R/B/O	NT_004668	AL121987	155749281	3			AL359981	155918115		45437	0	0	45437
S/G/Y/R/B/O	NT_004668	AL139011	155918115	3	chr1	NT_004668	AL513282	155968308	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL139011	155918115	3			AL359981	155749281		52186	0	0	52186
S/G/Y/R/B/O	NT_004668	AL513282	155968308	3	chr1	NT_004668	AL445230	156043045	3	0	1983	0	1983
S/G/Y/R/B/O	NT_004668	AL513282	155968308	3			AL359981	155749281		12555	0	25337	37892
S/G/Y/R/B/O	NT_004668	AL445230	156043045	3	chr1	NT_004668	AL138930	156143390	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL445230	156043045	3			AL138932	156143390		58943	7054	6787	72784
S/G/Y/R/B/O	NT_004668	AL138930	156143390	3	chr1	NT_004668	AL121985	156316776	3	0	1995	0	1995
S/G/Y/R/B/O	NT_004668	AL138930	156143390	3			AC012471	155968308		46623	3794	9518	59935
S/G/Y/R/B/O	NT_004668	AL138930	156143390	3			AL138932	156316776		34037	0	0	34037
S/G/Y/R/B/O	NT_004668	AL138930	156143390	3			AL355996	156316776		106338	2786	0	109124
S/G/Y/R/B/O	NT_004668	AL121985	156316776	3	chr1	NT_004668	AL354714	156510755	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL121985	156316776	3			AC027082	156043045		23126	1701	0	24827
S/G/Y/R/B/O	NT_004668	AL121985	156316776	3			AL355996	156143390		29757	2414	0	32171
S/G/Y/R/B/O	NT_004668	AL354714	156510755	3	chr1	NT_004668	AL591806	156648051	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL354714	156510755	3			AC068728	156143390		19159	0	0	19159
S/G/Y/R/B/O	NT_004668	AL354714	156510755	3			AL162592	156143390		10117	0	0	10117
S/G/Y/R/B/O	NT_004668	AL591806	156648051	3	chr1	NT_004668	AL590714	156848873	3	0	0	1840	1840
S/G/Y/R/B/O	NT_004668	AL591806	156648051	3			AL162592	156648051		71383	0	61435	132818
S/G/Y/R/B/O	NT_004668	AL591806	156648051	3			AL590651	156510755		15871	2748	0	18619
S/G/Y/R/B/O	NT_004668	AL590714	156848873	3	chr1	NT_004668	AL592295	156980385	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL592295	156980385	3	chr1	NT_004668	AL831711	157140574	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL831711	157140574	3	chr1	NT_004668	AL590385	157147375	3	0	1974	0	1974
S/G/Y/R/B/O	NT_004668	AL590385	157147375	3	chr1	NT_004668	AL359541	157256174	3	0	1986	0	1986
S/G/Y/R/B/O	NT_004668	AL590385	157147375	3			AC021370	157147375		18814	0	0	18814
S/G/Y/R/B/O	NT_004668	AL359541	157256174	3	chr1	NT_004668	AL450995	157412818	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL359541	157256174	3			AC021370	157140574		34638	2305	41740	78683
S/G/Y/R/B/O	NT_004668	AL450995	157412818	3	chr1	NT_004668	AL391825	157417827	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL391825	157417827	3	chr1	NT_004668	AL590408	157627489	3	0	1996	0	1996
S/G/Y/R/B/O	NT_004668	AL590408	157627489	3	chr1	NT_004668	AL450163	157729012	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL590408	157627489	3			AL356355	157627489		79571	0	0	79571
S/G/Y/R/B/O	NT_004668	AL450163	157729012	3	chr1	NT_004668	AL512785	157935420	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL450163	157729012	3			AC034129	157729012		18334	1462	0	19796
S/G/Y/R/B/O	NT_004668	AL450163	157729012	3			AL356355	157729012		94279	0	0	94279
S/G/Y/R/B/O	NT_004668	AL512785	157935420	3	chr1	NT_004668	AL359699	158050302	3	0	1982	0	1982
S/G/Y/R/B/O	NT_004668	AL512785	157935420	3			AC027205	157627489		49053	4885	12931	66869
S/G/Y/R/B/O	NT_004668	AL512785	157935420	3			AC034129	157627489		82793	7384	10655	100832
S/G/Y/R/B/O	NT_004668	AL512785	157935420	3			AC040905	157627489		81793	4707	9012	95512
S/G/Y/R/B/O	NT_004668	AL359699	158050302	3	chr1	NT_004668	AL596325	158154204	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL359699	158050302	3			AC027205	157729012		15885	2584	41405	59874
S/G/Y/R/B/O	NT_004668	AL359699	158050302	3			AC040901	157729012		20327	2071	0	22398
S/G/Y/R/B/O	NT_004668	AL359699	158050302	3			AC040905	157729012		15922	0	1271	17193
S/G/Y/R/B/O	NT_004668	AL596325	158154204	3	chr1	NT_004668	AL445197	158304974	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL596325	158154204	3			AC040901	158154204		79627	4438	24259	108324
S/G/Y/R/B/O	NT_004668	AL445197	158304974	3	chr1	NT_004668	AL392003	158420014	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL445197	158304974	3			AC040908	158304974		38988	1654	31777	72419
S/G/Y/R/B/O	NT_004668	AL445197	158304974	3			AC069039	158304974		34423	10775	2328	47526
S/G/Y/R/B/O	NT_004668	AL445197	158304974	3			AL390875	158304974		15683	10003	9398	35084
S/G/Y/R/B/O	NT_004668	AL445197	158304974	3			AL391536	158304974		57831	0	4214	62045
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3	chr1	NT_004668	AL583850	158609888	3	0	1996	0	1996
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AC031977	158154204		12642	0	0	12642
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AC040908	158154204		44893	0	14591	59484
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AC069039	158154204		38954	11741	5025	55720
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AL390875	158154204		10556	2118	7762	20436
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AL391536	158154204		41270	0	13413	54683
S/G/Y/R/B/O	NT_004668	AL392003	158420014	3			AL441926	158154204		54936	0	20363	75299
S/G/Y/R/B/O	NT_004668	AL583850	158609888	3	chr1	NT_004668	AL499616	158773217	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL583850	158609888	3			AC031977	158609888		84000	0	80576	164576
S/G/Y/R/B/O	NT_004668	AL499616	158773217	3	chr1	NT_004668	AL451063	158813545	3	0	0	1837	1837
S/G/Y/R/B/O	NT_004668	AL499616	158773217	3			AC031977	158773217		17730	0	0	17730
S/G/Y/R/B/O	NT_004668	AL451063	158813545	3	chr1	NT_004668	AL592435	158878152	3	0	0	1591	1591
S/G/Y/R/B/O	NT_004668	AL592435	158878152	3	chr1	NT_004668	AL603841	159037831	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL603841	159037831	3	chr1	NT_004668	AL513307	159077448	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL513307	159077448	3	chr1	NT_004668	AL663120	159243992	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL513307	159077448	3			AL358816	159077448		32305	0	20646	52951
S/G/Y/R/B/O	NT_004668	AL663120	159243992	3	chr1	NT_004668	AL136457	159260017	3	0	1996	0	1996
S/G/Y/R/B/O	NT_004668	AL663120	159243992	3			AL358816	159260017		10888	0	0	10888
S/G/Y/R/B/O	NT_004668	AL136457	159260017	3	chr1	NT_004668	AL663121	159342892	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL136457	159260017	3			AL358816	159260017		15543	0	0	15543
S/G/Y/R/B/O	NT_004668	AL663121	159342892	3	chr1	NT_004668	AL355862	159360942	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL355862	159360942	3	chr1	NT_004668	AL358875	159461467	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL355862	159360942	3			AC013741	159260017		58091	0	0	58091
S/G/Y/R/B/O	NT_004668	AL355862	159360942	3			AC022442	159260017		19455	0	0	19455
S/G/Y/R/B/O	NT_004668	AL355862	159360942	3			AC073981	159260017		12539	0	996	13535
S/G/Y/R/B/O	NT_004668	AL358875	159461467	3	chr1	NT_004668	AL596213	159631102	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL358875	159461467	3			AC013741	159461467		93971	0	0	93971
S/G/Y/R/B/O	NT_004668	AL358875	159461467	3			AC016221	159461467		61755	7539	4231	73525
S/G/Y/R/B/O	NT_004668	AL358875	159461467	3			AC022442	159461467		171634	0	0	171634
S/G/Y/R/B/O	NT_004668	AL358875	159461467	3			AC073981	159461467		55509	3215	36917	95641
S/G/Y/R/B/O	NT_004668	AL596213	159631102	3	chr1	NT_004668	AL356428	159658887	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL356428	159658887	3	chr1	NT_004668	AL357512	159831626	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL357512	159831626	3	chr1	NT_004668	AL513364	160013650	3	0	0	1664	1664
S/G/Y/R/B/O	NT_004668	AL357512	159831626	3			AC024302	159631102		44195	3648	20092	67935
S/G/Y/R/B/O	NT_004668	AL513364	160013650	3	chr1	NT_004668	AL357132	160086601	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL513364	160013650	3			AC024302	160013650		16904	0	32288	49192
S/G/Y/R/B/O	NT_004668	AL357132	160086601	3	chr1	NT_004668	AL359255	160174108	3	0	0	1556	1556
S/G/Y/R/B/O	NT_004668	AL359255	160174108	3	chr1	NT_004668	AL391001	160192917	3	0	1962	0	1962
S/G/Y/R/B/O	NT_004668	AL391001	160192917	3	chr1	NT_004668	AL357568	160387683	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL391001	160192917	3			AC024315	160192917		103858	3715	6295	113868
S/G/Y/R/B/O	NT_004668	AL357568	160387683	3	chr1	NT_004668	AL390119	160457042	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL357568	160387683	3			AC024315	160174108		49543	0	0	49543
S/G/Y/R/B/O	NT_004668	AL390119	160457042	3	chr1	NT_004668	AL360088	160652524	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL360088	160652524	3	chr1	NT_004668	AL390730	160814537	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL360088	160652524	3			AC025391	160652524		44769	3133	21825	69727
S/G/Y/R/B/O	NT_004668	AL360088	160652524	3			AC027244	160652524		12035	10873	15970	38878
S/G/Y/R/B/O	NT_004668	AL390730	160814537	3	chr1	NT_004668	AL590112	160930296	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL390730	160814537	3			AC027244	160814537		74549	19790	6108	100447
S/G/Y/R/B/O	NT_004668	AL390730	160814537	3			AC027639	160814537		58606	0	23786	82392
S/G/Y/R/B/O	NT_004668	AL590112	160930296	3	chr1	NT_004668	AL160058	160963417	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL590112	160930296	3			AC027244	160930296		14920	3633	3371	21924
S/G/Y/R/B/O	NT_004668	AL590112	160930296	3			AC027639	160930296		14974	2177	16364	33515
S/G/Y/R/B/O	NT_004668	AL160058	160963417	3	chr1	NT_004668	AL157714	161116786	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL160058	160963417	3			AC009625	160814537		76692	0	10440	87132
S/G/Y/R/B/O	NT_004668	AL160058	160963417	3			AC027639	160814537		53022	2675	2511	58208
S/G/Y/R/B/O	NT_004668	AL157714	161116786	3	chr1	NT_004668	AL356441	161195243	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL157714	161116786	3			AC009625	160930296		34054	2630	33453	70137
S/G/Y/R/B/O	NT_004668	AL157714	161116786	3			AC064827	160930296		28887	1586	17060	47533
S/G/Y/R/B/O	NT_004668	AL356441	161195243	3	chr1	NT_004668	AL451074	161269157	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL356441	161195243	3			AC064827	161195243		43122	4548	4985	52655
S/G/Y/R/B/O	NT_004668	AL451074	161269157	3	chr1	NT_004668	AL358115	161455374	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004668	AL451074	161269157	3			AC064827	161269157		10776	18198	32718	61692
S/G/Y/R/B/O	NT_004668	AL358115	161455374	3	chr1	NT_004668	AL606495	161553240	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004668	AL358115	161455374	3			AC016371	161455374		45398	0	0	45398
S/G/Y/R/B/O	NT_004668	AL606495	161553240	3	chr1	NT_004668	AL626787	161672204	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004668	AL606495	161553240	3			AC016371	161553240		14748	1825	18012	34585
S/G/Y/R/B/O	NT_004668	AL626787	161672204	3	chr1	NT_004668	AL596087	161742089	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL596087	161742089	3	chr1	NT_004668	AL390115	161920807	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL596087	161742089	3			AC011221	161553240		100008	0	0	100008
S/G/Y/R/B/O	NT_004668	AL596087	161742089	3			AC018774	161553240		16979	0	0	16979
S/G/Y/R/B/O	NT_004668	AL390115	161920807	3	chr1	NT_004668	AL583804	162021340	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL583804	162021340	3	chr1	NT_004668	AL611962	162188177	3	0	0	1890	1890
S/G/Y/R/B/O	NT_004668	AL583804	162021340	3			AC025393	161742089		33505	6109	4788	44402
S/G/Y/R/B/O	NT_004668	AL611962	162188177	3	chr1	NT_004668	AL356005	162269228	3	0	2000	0	2000
S/G/Y/R/B/O	NT_004668	AL611962	162188177	3			AC015623	162188177		35241	504	0	35745
S/G/Y/R/B/O	NT_004668	AL611962	162188177	3			AL356375	162269228		11863	0	0	11863
S/G/Y/R/B/O	NT_004668	AL356005	162269228	3	chr1	NT_004668	AL008639	162385653	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL356005	162269228	3			AC015623	162021340		33096	1485	0	34581
S/G/Y/R/B/O	NT_004668	AL356005	162269228	3			AL356375	162021340		28859	0	20717	49576
S/G/Y/R/B/O	NT_004668	AL008639	162385653	3	chr1	NT_004668	AL009182	162492530	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL008639	162385653	3			AL356375	162188177		32470	0	0	32470
S/G/Y/R/B/O	NT_004668	AL009182	162492530	3	chr1	NT_004668	AL158837	162603450	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL158837	162603450	3	chr1	NT_004668	AL451050	162752192	3	0	1945	0	1945
S/G/Y/R/B/O	NT_004668	AL451050	162752192	3	chr1	NT_004668	AL136984	162872614	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004668	AL136984	162872614	3	chr1	NT_004668	AL359962	163040240	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL136984	162872614	3			AC073241	162603450		68147	1199	13197	82543
S/G/Y/R/B/O	NT_004668	AL359962	163040240	3	chr1	NT_004668	AL031733	163105413	3	0	1996	0	1996
S/G/Y/R/B/O	NT_004668	AL359962	163040240	3			AC073241	162752192		64674	760	0	65434
S/G/Y/R/B/O	NT_004668	AL031733	163105413	3	chr1	NT_004668	AL356532	163319274	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031733	163105413	3			AC073241	162872614		38437	0	0	38437
S/G/Y/R/B/O	NT_004668	AL356532	163319274	3	chr1	NT_004668	Z99943	163343880	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	Z99943	163343880	3	chr1	NT_004668	Z97876	163472010	3	0	0	5629	5629
S/G/Y/R/B/O	NT_004668	Z97876	163472010	3	chr1	NT_004668	AL031287	163568372	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	Z97876	163472010	3			AC069147	163472010		65120	0	7238	72358
S/G/Y/R/B/O	NT_004668	AL031287	163568372	3	chr1	NT_004668	AL033531	163643001	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031287	163568372	3			AC026140	163343880		23791	3773	10389	37953
S/G/Y/R/B/O	NT_004668	AL031287	163568372	3			AC069147	163343880		12902	0	0	12902
S/G/Y/R/B/O	NT_004668	AL033531	163643001	3	chr1	NT_004668	AL033532	163691339	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL033531	163643001	3			AC026140	163643001		48445	0	0	48445
S/G/Y/R/B/O	NT_004668	AL033532	163691339	3	chr1	NT_004668	AL021397	163772870	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL021397	163772870	3	chr1	NT_004668	AL009051	163836686	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL009051	163836686	3	chr1	NT_004668	AL022100	163942901	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL022100	163942901	3	chr1	NT_004668	AL023755	164036382	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL023755	164036382	3	chr1	NT_004668	AL137075	164123996	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL137075	164123996	3	chr1	NT_004668	AL031736	164134982	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031736	164134982	3	chr1	NT_004668	AL356573	164282301	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL356573	164282301	3	chr1	NT_004668	AL049798	164302146	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL049798	164302146	3	chr1	NT_004668	AL031275	164376868	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031275	164376868	3	chr1	NT_004668	AL135926	164486589	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL135926	164486589	3	chr1	NT_004668	AL591862	164645008	3	0	1968	0	1968
S/G/Y/R/B/O	NT_004668	AL591862	164645008	3	chr1	NT_004668	AL031726	164662325	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL031726	164662325	3	chr1	NT_004668	Z99758	164813950	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL031726	164662325	3			AL390855	164486589		128009	0	0	128009
S/G/Y/R/B/O	NT_004668	Z99758	164813950	3	chr1	NT_004668	AL356852	164952738	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	Z99758	164813950	3			AC068046	164813950		16500	0	8292	24792
S/G/Y/R/B/O	NT_004668	Z99758	164813950	3			AL390855	164662325		24317	0	12576	36893
S/G/Y/R/B/O	NT_004668	AL356852	164952738	3	chr1	NT_004668	AL021068	165007486	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL356852	164952738	3			AC068046	164662325		34362	0	0	34362
S/G/Y/R/B/O	NT_004668	AL021068	165007486	3	chr1	NT_004668	Z99572	165107060	3	0	0	104	104
S/G/Y/R/B/O	NT_004668	AL021068	165007486	3			AC068046	62954288		14093	2554	17014	33661
S/G/Y/R/B/O	NT_004668	Z99572	165107060	3	chr1	NT_004668	AL022146	165213527	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL022146	165213527	3	chr1	NT_004668	AL021940	165291452	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL021940	165291452	3	chr1	NT_004668	AL031297	165432941	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031297	165432941	3	chr1	NT_004668	AL445191	165536022	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL445191	165536022	3	chr1	NT_004668	AL121714	165539799	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL121714	165539799	3	chr1	NT_004668	AL356475	165628576	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL356475	165628576	3	chr1	NT_004668	AL162428	165734623	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL356475	165628576	3			AL356633	165291452		23528	0	0	23528
S/G/Y/R/B/O	NT_004668	AL162428	165734623	3	chr1	NT_004668	AL445203	165736617	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004668	AL445203	165736617	3	chr1	NT_004668	AL354699	165909060	3	0	1995	0	1995
S/G/Y/R/B/O	NT_004668	AL445203	165736617	3			AL356633	165909060		35544	5562	0	41106
S/G/Y/R/B/O	NT_004668	AL354699	165909060	3	chr1	NT_004668	AL354732	165988543	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL354732	165988543	3	chr1	NT_004668	AL162399	166125786	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL162399	166125786	3	chr1	NT_004668	AL023495	166215425	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004668	AL023495	166215425	3	chr1	NT_004668	Z97200	166241410	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	Z97200	166241410	3	chr1	NT_004668	AL031285	166399859	3	0	0	100	100
S/G/Y/R/B/O	NT_004668	AL031285	166399859	3	chr1	NT_004668	AL031965	166526106	3	0	0	0	0
S/G/Y/R/B/O	NT_004668	AL031965	166526106	3
S/G/Y/R/B/O	NT_004668	AL031965	166526106	3			AC078800	166241410		11106	0	3923	15029