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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_019273
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_019273AL3558171093674303chr1NT_019273AL77241110938358330000
S/G/Y/R/B/O NT_019273AL7724111093835833chr1NT_019273AL160006109462853300100100
S/G/Y/R/B/O NT_019273AL1600061094628533chr1NT_019273AL35599010955263432000002000
S/G/Y/R/B/O NT_019273AL1600061094628533  AC019225109462853769094382492486215
S/G/Y/R/B/O NT_019273AL3559901095526343chr1NT_019273AL13779010959797230199901999
S/G/Y/R/B/O NT_019273AL3559901095526343  AC019225109383583408472459043306
S/G/Y/R/B/O NT_019273AL3559901095526343  AL772412109462853104510010451
S/G/Y/R/B/O NT_019273AL1377901095979723chr1NT_019273AL35548810972538130200002000
S/G/Y/R/B/O NT_019273AL1377901095979723  AC019225109462853512956827264260764
S/G/Y/R/B/O NT_019273AL1377901095979723  AC025987109462853348380034838
S/G/Y/R/B/O NT_019273AL1377901095979723  AC068519109462853189011695020596
S/G/Y/R/B/O NT_019273AL3554881097253813chr1NT_019273AL39079710980451830200002000
S/G/Y/R/B/O NT_019273AL3554881097253813  AC025987109552634772850077285
S/G/Y/R/B/O NT_019273AL3554881097253813  AC0685191095526343929516969589262156
S/G/Y/R/B/O NT_019273AL3907971098045183chr1NT_019273AL35821510986478932000002000
S/G/Y/R/B/O NT_019273AL3907971098045183  AC0259871098045181007244573277547304
S/G/Y/R/B/O NT_019273AL3907971098045183  AC068519109804518326966006750146203
S/G/Y/R/B/O NT_019273AL3582151098647893chr1NT_019273AL36536110996431830200002000
S/G/Y/R/B/O NT_019273AL3582151098647893  AC068519109864789332497915578046944
S/G/Y/R/B/O NT_019273AL3653611099643183chr1NT_019273AL35471311015550030199601996
S/G/Y/R/B/O NT_019273AL3653611099643183  AC02537510980451818267077819045
S/G/Y/R/B/O NT_019273AL3653611099643183  AL513469109864789234500023450
S/G/Y/R/B/O NT_019273AL3547131101555003chr1NT_019273AL39106411029187030000
S/G/Y/R/B/O NT_019273AL3547131101555003  AC0253751098647893275505262985384
S/G/Y/R/B/O NT_019273AL3547131101555003  AL136374109864789837440083744
S/G/Y/R/B/O NT_019273AL3910641102918703chr1NT_019273AL36027011032127730000
S/G/Y/R/B/O NT_019273AL3602701103212773chr1NT_019273AL35581611049408230000
S/G/Y/R/B/O NT_019273AL3602701103212773  AC06802710996431814342130571685744256
S/G/Y/R/B/O NT_019273AL3558161104940823chr1NT_019273AL51320211063576830199601996
S/G/Y/R/B/O NT_019273AL3558161104940823  AC013327109964318444092811047220
S/G/Y/R/B/O NT_019273AL3558161104940823  AC013327109964318444092811047220
S/G/Y/R/B/O NT_019273AL3558161104940823  AC013387109964318605620060562
S/G/Y/R/B/O NT_019273AL3558161104940823  AC013387109964318605620060562
S/G/Y/R/B/O NT_019273AL3558161104940823  AL1391541099643185854081701165278362
S/G/Y/R/B/O NT_019273AL3558161104940823  AL1391541099643185854081701165278362
S/G/Y/R/B/O NT_019273AL3558161104940823  AL389917109964318201950020195
S/G/Y/R/B/O NT_019273AL3558161104940823  AL389917109964318201950020195
S/G/Y/R/B/O NT_019273AL3558161104940823  AL391727109964318118850011885
S/G/Y/R/B/O NT_019273AL3558161104940823  AL391727109964318118850011885
S/G/Y/R/B/O NT_019273AL5132021106357683chr1NT_019273AL35638711072750830015631563
S/G/Y/R/B/O NT_019273AL5132021106357683  AL139154110635768151997393738229974
S/G/Y/R/B/O NT_019273AL3563871107275083chr1NT_019273AL39019511081707730199801998
S/G/Y/R/B/O NT_019273AL3901951108170773chr1NT_019273AL39106311096818530199601996
S/G/Y/R/B/O NT_019273AL3901951108170773  AL357633110727508429260042926
S/G/Y/R/B/O NT_019273AL3910631109681853chr1NT_019273AL13901211102312730000
S/G/Y/R/B/O NT_019273AL3910631109681853  AL3576331109681851876450551797941798
S/G/Y/R/B/O NT_019273AL3910631109681853  AL3576331109681851876450551797941798
S/G/Y/R/B/O NT_019273AL1390121110231273chr1NT_019273AL04955711106467830199501995
S/G/Y/R/B/O NT_019273AL1390121110231273  AL357633111064678352040187637080
S/G/Y/R/B/O NT_019273AL0495571110646783chr1NT_019273AL450997111191055300100100
S/G/Y/R/B/O NT_019273AL0495571110646783  AC02218111106467856039245166959159
S/G/Y/R/B/O NT_019273AL0495571110646783  AL357144111023127170310017031
S/G/Y/R/B/O NT_019273AL0495571110646783  AL357633111023127145350014535
S/G/Y/R/B/O NT_019273AL4509971111910553chr1NT_019273AL39007011131764730199901999
S/G/Y/R/B/O NT_019273AL4509971111910553  AC016039111191055285280028528
S/G/Y/R/B/O NT_019273AL4509971111910553  AC022181111191055831917445547596111
S/G/Y/R/B/O NT_019273AL4509971111910553  AL35714411106467880501500335951121455
S/G/Y/R/B/O NT_019273AL4509971111910553  AL592143111317647238900023890
S/G/Y/R/B/O NT_019273AL3900701113176473chr1NT_019273AL512665111381906300369369
S/G/Y/R/B/O NT_019273AL3900701113176473  AC016039111317647434110043411
S/G/Y/R/B/O NT_019273AL3900701113176473  AL592143111381906661980066198
S/G/Y/R/B/O NT_019273AL3900701113176473  AP001834111381906320924974391540981
S/G/Y/R/B/O NT_019273AL5126651113819063chr1NT_019273AL35711411155113630199901999
S/G/Y/R/B/O NT_019273AL5126651113819063  AC01573011138190685943155514397101895
S/G/Y/R/B/O NT_019273AL5126651113819063  AC016039111381906595850059585
S/G/Y/R/B/O NT_019273AL5126651113819063  AC01608111138190688872167219107109651
S/G/Y/R/B/O NT_019273AL5126651113819063  AL592143111317647986450098645
S/G/Y/R/B/O NT_019273AL5126651113819063  AP001834111317647669832043031313118726
S/G/Y/R/B/O NT_019273AL3571141115511363chr1NT_019273AL44542611155498730199701997
S/G/Y/R/B/O NT_019273AL4454261115549873chr1NT_019273AL59152111171210530015001500
S/G/Y/R/B/O NT_019273AL4454261115549873  AC0135201113819067312410816196385903
S/G/Y/R/B/O NT_019273AL4454261115549873  AC015730111381906211820021182
S/G/Y/R/B/O NT_019273AL4454261115549873  AC016081111381906429730042973
S/G/Y/R/B/O NT_019273AL4454261115549873  AL645737111712105278510027851
S/G/Y/R/B/O NT_019273AL5915211117121053chr1NT_019273AL45040711180721530190401904
S/G/Y/R/B/O NT_019273AL5915211117121053  AL3900621117121054409702714771244
S/G/Y/R/B/O NT_019273AL4504071118072153chr1NT_019273AL35476011182332130199601996
S/G/Y/R/B/O NT_019273AL4504071118072153  AL390062111823321178860017886
S/G/Y/R/B/O NT_019273AL4504071118072153  AL645737111712105180570018057
S/G/Y/R/B/O NT_019273AL3547601118233213chr1NT_019273AL10993211193329730199901999
S/G/Y/R/B/O NT_019273AL3547601118233213  AL39006211193329738580065437104017
S/G/Y/R/B/O NT_019273AL3547601118233213  AL645737111807215382590038259
S/G/Y/R/B/O NT_019273AL1099321119332973chr1NT_019273AC02448111203073812207390251944050538
S/G/Y/R/B/O NT_019273AC0244811120307381chr1NT_019273AL92947011204244210000
S/G/Y/R/B/O NT_019273AC0244811120307381chr1NT_019273AL603832112074760327454125301081650800
S/G/Y/R/B/O NT_019273AL9294701120424421chr1NT_019273AL60383211207476030000
S/G/Y/R/B/O NT_019273AL6038321120747603chr1NT_019273AL39072911226708330128101281
S/G/Y/R/B/O NT_019273AL6038321120747603chr1NT_019273AC024481112030738127454125301081650800
S/G/Y/R/B/O NT_019273AL3907291122670833chr1NT_019273AL15884411233673932000002000
S/G/Y/R/B/O NT_019273AL3907291122670833  AC110993112267083106584989224617893
S/G/Y/R/B/O NT_019273AL3907291122670833  AL672077112074760184960018496
S/G/Y/R/B/O NT_019273AL1588441123367393chr1NT_019273AL390242112388141300100100
S/G/Y/R/B/O NT_019273AL1588441123367393  AC110993112074760533710053371
S/G/Y/R/B/O NT_019273AL1588441123367393  AL390315112388141367094377041086
S/G/Y/R/B/O NT_019273AL1588441123367393  AL672077112267083272780027278
S/G/Y/R/B/O NT_019273AL3902421123881413chr1NT_019273AL35705511245692420199301993
S/G/Y/R/B/O NT_019273AL3902421123881413  AC006286112267083320490032049
S/G/Y/R/B/O NT_019273AL3902421123881413  AL390315112456924232070023207
S/G/Y/R/B/O NT_019273AL3570551124569242chr1NT_019273AL13901611263928330000
S/G/Y/R/B/O NT_019273AL1390161126392833chr1NT_019273AL36522511273992630000
S/G/Y/R/B/O NT_019273AL3652251127399263chr1NT_019273AL39105811283672132000002000
S/G/Y/R/B/O NT_019273AL3910581128367213chr1NT_019273AL38992111291720430000
S/G/Y/R/B/O NT_019273AL3899211129172043chr1NT_019273AL39075911298396830000
S/G/Y/R/B/O NT_019273AL3907591129839683chr1NT_019273AL13351711305533230000
S/G/Y/R/B/O NT_019273AL1335171130553323chr1NT_019273AL36532111318088530199501995
S/G/Y/R/B/O NT_019273AL1335171130553323  AC0244631127399263153038101480650146
S/G/Y/R/B/O NT_019273AL3653211131808853chr1NT_019273AL13785611321977630199901999
S/G/Y/R/B/O NT_019273AL3653211131808853  AC024463113180885325980032598
S/G/Y/R/B/O NT_019273AL1378561132197763chr1NT_019273AL73179711336139530200002000
S/G/Y/R/B/O NT_019273AL1378561132197763  AC027074113219776164102685107220167
S/G/Y/R/B/O NT_019273AL7317971133613953chr1NT_019273AL59174211340764832000002000
S/G/Y/R/B/O NT_019273AL7317971133613953  AC027074113361395394874343105944889
S/G/Y/R/B/O NT_019273AL5917421134076483chr1NT_019273AL16259411349169730000
S/G/Y/R/B/O NT_019273AL5917421134076483  AC0270741134076481560803182047428
S/G/Y/R/B/O NT_019273AL1625941134916973chr1NT_019273AL121999113603795300100100
S/G/Y/R/B/O NT_019273AL1625941134916973  AC02355111336139542977122512495480182
S/G/Y/R/B/O NT_019273AL1219991136037953chr1NT_019273AL51229111374118530000
S/G/Y/R/B/O NT_019273AL1219991136037953  AC023551113603795557632626794666335
S/G/Y/R/B/O NT_019273AL1219991136037953  AC025631113603795270080027008
S/G/Y/R/B/O NT_019273AL5122911137411853chr1NT_019273AL03541011374269230000
S/G/Y/R/B/O NT_019273AL0354101137426923chr1NT_019273AL390241113885144300100100
S/G/Y/R/B/O NT_019273AL0354101137426923  AL39106011388514414269000142690
S/G/Y/R/B/O NT_019273AL3902411138851443chr1NT_019273AL13338211400854530000
S/G/Y/R/B/O NT_019273AL3902411138851443  AC02341111388514410779532398344119378
S/G/Y/R/B/O NT_019273AL3902411138851443  AC053473113885144501451103442533103712
S/G/Y/R/B/O NT_019273AL3902411138851443  AL39106011374269212324800123248
S/G/Y/R/B/O NT_019273AL1333821140085453chr1NT_019273AL09677311408986430000
S/G/Y/R/B/O NT_019273AL1333821140085453  AC053473113742692222820022282
S/G/Y/R/B/O NT_019273AL0967731140898643chr1NT_019273AL39023511422997130000
S/G/Y/R/B/O NT_019273AL0967731140898643  AL627207113742692205260020526
S/G/Y/R/B/O NT_019273AL3902351142299713chr1NT_019273AL35837211425107430000
S/G/Y/R/B/O NT_019273AL3583721142510743chr1NT_019273AL64550211440489332000002000
S/G/Y/R/B/O NT_019273AL6455021144048933chr1NT_019273AL10966011442863832000002000
S/G/Y/R/B/O NT_019273AL1096601144286383chr1NT_019273AL13942811456620132000002000
S/G/Y/R/B/O NT_019273AL1096601144286383  AL390120114566201517194467056186
S/G/Y/R/B/O NT_019273AL1394281145662013chr1NT_019273AL04982511460788030199201992
S/G/Y/R/B/O NT_019273AL1394281145662013  AL390120114428638265951789028384
S/G/Y/R/B/O NT_019273AL0498251146078803chr1NT_019273AL60649911472240132000002000
S/G/Y/R/B/O NT_019273AL0498251146078803  AL390120114566201455297221052750
S/G/Y/R/B/O NT_019273AL6064991147224013chr1NT_019273AL51263811474316332000002000
S/G/Y/R/B/O NT_019273AL5126381147431633chr1NT_019273AL15795011491822932000002000
S/G/Y/R/B/O NT_019273AL5126381147431633chr1NT_019273AP0013931149643111530280531458342
S/G/Y/R/B/O NT_019273AL1579501149182293chr1NT_019273AP0013931149643111167130944126154
S/G/Y/R/B/O NT_019273AP0013931149643111chr1NT_019273AL5924361149666563334290255035979
S/G/Y/R/B/O NT_019273AP0013931149643111chr1NT_019273AL5126381147431633530280531458342
S/G/Y/R/B/O NT_019273AL5924361149666563chr1NT_019273AL45038911506343830000
S/G/Y/R/B/O NT_019273AL4503891150634383chr1NT_019273AL44926411516306134724004724
S/G/Y/R/B/O NT_019273AL4503891150634383  AL606529115163061668220066822
S/G/Y/R/B/O NT_019273AL4492641151630613chr1NT_019273AL357137115322990300100100
S/G/Y/R/B/O NT_019273AL4492641151630613  AC025078115163061316124027035639
S/G/Y/R/B/O NT_019273AL4492641151630613  AL365262115322990373152543378743645
S/G/Y/R/B/O NT_019273AL3571371153229903chr1NT_019273AL36531811542325730000
S/G/Y/R/B/O NT_019273AL3571371153229903  AC025078115063438822810082281
S/G/Y/R/B/O NT_019273AL3571371153229903  AL365262115063438535878366061953
S/G/Y/R/B/O NT_019273AL3653181154232573chr1NT_019273AL12198211552083230000
S/G/Y/R/B/O NT_019273AL3653181154232573  AC025078115163061210710021071
S/G/Y/R/B/O NT_019273AL1219821155208323chr1NT_019273AL8317821155912513323590032359
S/G/Y/R/B/O NT_019273AL1219821155208323  AL158842115163061194920019492
S/G/Y/R/B/O NT_019273AL8317821155912513chr1NT_019273AL35553811566319930200002000
S/G/Y/R/B/O NT_019273AL3555381156631993chr1NT_019273AL13637611578825032000002000
S/G/Y/R/B/O NT_019273AL3555381156631993  AC004904115663199282840028284
S/G/Y/R/B/O NT_019273AL3555381156631993  AC004919115663199754550075455
S/G/Y/R/B/O NT_019273AL1363761157882503chr1NT_019273AL39006611585725830199901999
S/G/Y/R/B/O NT_019273AL1363761157882503  AC004904115591251710010071001
S/G/Y/R/B/O NT_019273AL3900661158572583chr1NT_019273AL355794115958869300100100
S/G/Y/R/B/O NT_019273AL3900661158572583  AC004904115857258307470030747
S/G/Y/R/B/O NT_019273AL3557941159588693chr1NT_019273AL356748116047253300100100
S/G/Y/R/B/O NT_019273AL3557941159588693  AC005815115958869884500088450
S/G/Y/R/B/O NT_019273AL3567481160472533chr1NT_019273AL135798116144712300100100
S/G/Y/R/B/O NT_019273AL3567481160472533  AC005815115857258922950092295
S/G/Y/R/B/O NT_019273AL3567481160472533  AL365325115958869443630196946332
S/G/Y/R/B/O NT_019273AL1357981161447123chr1NT_019273AL15790411624782130199601996
S/G/Y/R/B/O NT_019273AL1357981161447123  AL3653251160472533334425111765753512
S/G/Y/R/B/O NT_019273AL1579041162478213