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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_004686
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004686AL355818889359453chr1NT_004686AL6914648899406930000
S/G/Y/R/B/O NT_004686AL691464889940693chr1NT_004686AL5962148907777830000
S/G/Y/R/B/O NT_004686AL596214890777783chr1NT_004686AC0995698915040330000
S/G/Y/R/B/O NT_004686AL596214890777783  AC02138588730687253000025300
S/G/Y/R/B/O NT_004686AC099569891504033chr1NT_004686AC093423892751833375390037539
S/G/Y/R/B/O NT_004686AC099569891504033  AC02138588730687763281848078176
S/G/Y/R/B/O NT_004686AC093423892751833chr1NT_004686AC099568894227453730240073024
S/G/Y/R/B/O NT_004686AC099568894227453chr1NT_004686AL3914978946608932574002574
S/G/Y/R/B/O NT_004686AL391497894660893chr1NT_004686AL1617978965326930017301730
S/G/Y/R/B/O NT_004686AL391497894660893  AC07909189466089697774452109175320
S/G/Y/R/B/O NT_004686AL391497894660893  AL5123678965326975333314545498123976
S/G/Y/R/B/O NT_004686AL161797896532693chr1NT_004686AC1354688975184010000
S/G/Y/R/B/O NT_004686AC135468897518401chr1NT_004686AC098656898455033153830015383
S/G/Y/R/B/O NT_004686AC098656898455033chr1NT_004686AL6273169001771310000
S/G/Y/R/B/O NT_004686AL627316900177131chr1NT_004686AC0927839007197630000
S/G/Y/R/B/O NT_004686AC092783900719763chr1NT_004686AC0920199018373930000
S/G/Y/R/B/O NT_004686AC092783900719763  AL35648789751840417960804849844
S/G/Y/R/B/O NT_004686AC092019901837393chr1NT_004686AC124917902244063354060035406
S/G/Y/R/B/O NT_004686AC092019901837393  AL35648790224406693440805477398
S/G/Y/R/B/O NT_004686AC092019901837393  AP00177890224406361060773643842
S/G/Y/R/B/O NT_004686AC124917902244063chr1NT_004686AC092805903082313661050066105
S/G/Y/R/B/O NT_004686AC124917902244063  AC01631990224406116841076012760
S/G/Y/R/B/O NT_004686AC124917902244063  AL355867903082311824501184730092
S/G/Y/R/B/O NT_004686AC124917902244063  AL35648790308231302040030204
S/G/Y/R/B/O NT_004686AC124917902244063  AP0017789030823146427099847425
S/G/Y/R/B/O NT_004686AC092805903082313chr1NT_004686AL5900949044144430199501995
S/G/Y/R/B/O NT_004686AC092805903082313  AC01631990308231972480097248
S/G/Y/R/B/O NT_004686AC092805903082313  AC0841519030823160880188331561895331
S/G/Y/R/B/O NT_004686AC092805903082313  AL355867902244067761310766801596394
S/G/Y/R/B/O NT_004686AC092805903082313  AP00177890441444100740010074
S/G/Y/R/B/O NT_004686AL590094904414443chr1NT_004686AC0916149047239230199901999
S/G/Y/R/B/O NT_004686AL590094904414443  AC01631990441444178410017841
S/G/Y/R/B/O NT_004686AL590094904414443  AC02221990441444146980014698
S/G/Y/R/B/O NT_004686AL590094904414443  AL35586790308231146820635821040
S/G/Y/R/B/O NT_004686AC091614904723923chr1NT_004686AL136109905781563237360023736
S/G/Y/R/B/O NT_004686AC091614904723923  AC02314790308231228170022817
S/G/Y/R/B/O NT_004686AL136109905781563chr1NT_004686AC119679906807571001771317713
S/G/Y/R/B/O NT_004686AL136109905781563  AC0222199044144410087700100877
S/G/Y/R/B/O NT_004686AL136109905781563  AC0231479044144467802036852104654
S/G/Y/R/B/O NT_004686AL136109905781563  AC02773890441444261130705033163
S/G/Y/R/B/O NT_004686AC119679906807571chr1NT_004686AL049743906911683696680069668
S/G/Y/R/B/O NT_004686AC119679906807571  AC0191879068075762080737062817
S/G/Y/R/B/O NT_004686AC119679906807571  AC023147906807572486220473357460483
S/G/Y/R/B/O NT_004686AC119679906807571  AC02773890680757573728760390270034
S/G/Y/R/B/O NT_004686AL049743906911683chr1NT_004686AC0935639072750130000
S/G/Y/R/B/O NT_004686AL049743906911683  AC01918790578156781660078166
S/G/Y/R/B/O NT_004686AL049743906911683  AC02314790578156125832047989124521
S/G/Y/R/B/O NT_004686AL049743906911683  AC027738905781564513263211515766610
S/G/Y/R/B/O NT_004686AC093563907275013chr1NT_004686AC0986909089110130000
S/G/Y/R/B/O NT_004686AC093563907275013  AC027738906807573708569681905763110
S/G/Y/R/B/O NT_004686AC093563907275013  AC07330190680757114410970321144
S/G/Y/R/B/O NT_004686AC093563907275013  AL35623690680757187210018721
S/G/Y/R/B/O NT_004686AC098690908911013chr1NT_004686AC013557909264841219030021903
S/G/Y/R/B/O NT_004686AC098690908911013  AC02773890926484308721822530738001
S/G/Y/R/B/O NT_004686AC098690908911013  AC073301909264843339302055053943
S/G/Y/R/B/O NT_004686AC013557909264841chr1NT_004686AC098691909989951839690083969
S/G/Y/R/B/O NT_004686AC013557909264841chr1NT_004686AL355871910526733297130029713
S/G/Y/R/B/O NT_004686AC013557909264841  AC0191779092648411096117789609122348
S/G/Y/R/B/O NT_004686AC013557909264841  AC07330190926484598830653766420
S/G/Y/R/B/O NT_004686AC013557909264841  AL356236910526731225621681494629370
S/G/Y/R/B/O NT_004686AC098691909989951chr1NT_004686AL355871910526733901410090141
S/G/Y/R/B/O NT_004686AC098691909989951  AC019177909264841022449865812109042
S/G/Y/R/B/O NT_004686AC098691909989951  AC027623909264843564628562753066032
S/G/Y/R/B/O NT_004686AC098691909989951  AC03416990926484224344725207029229
S/G/Y/R/B/O NT_004686AC098691909989951  AL51238191052673160860016086
S/G/Y/R/B/O NT_004686AL355871910526733chr1NT_004686AL7140229120526230189901899
S/G/Y/R/B/O NT_004686AL355871910526733chr1NT_004686AC013557909264841297130029713
S/G/Y/R/B/O NT_004686AL355871910526733  AC01917790926484534111825121856454
S/G/Y/R/B/O NT_004686AL355871910526733  AC0276239092648447152285655822105830
S/G/Y/R/B/O NT_004686AL355871910526733  AC03416990926484562656355328765907
S/G/Y/R/B/O NT_004686AL355871910526733  AL51238190998995277920027792
S/G/Y/R/B/O NT_004686AL714022912052623chr1NT_004686AC0993349126832130017091709
S/G/Y/R/B/O NT_004686AL714022912052623  AC02107591205262465560046556
S/G/Y/R/B/O NT_004686AL714022912052623  AC027623912052623097833741518949541
S/G/Y/R/B/O NT_004686AL714022912052623  AC034169912052622975901865948418
S/G/Y/R/B/O NT_004686AL714022912052623  AL51238191052673630560063056
S/G/Y/R/B/O NT_004686AC099334912683213chr1NT_004686AL4459929137888730199501995
S/G/Y/R/B/O NT_004686AC099334912683213chr1NT_004464AC105274738949051289637156716043279
S/G/Y/R/B/O NT_004686AC099334912683213  AC02419591052673153620015362
S/G/Y/R/B/O NT_004686AL445992913788873chr1NT_004686AL1622639141121630192301923
S/G/Y/R/B/O NT_004686AL445992913788873  AC02419591205262289590482333782
S/G/Y/R/B/O NT_004686AL162263914112163chr1NT_004686AL3907809148117130199801998
S/G/Y/R/B/O NT_004686AL162263914112163  AC02419591411216703430070343
S/G/Y/R/B/O NT_004686AL162263914112163  AL59055591378887480950048095
S/G/Y/R/B/O NT_004686AL390780914811713chr1NT_004686AC1144869154026630199601996
S/G/Y/R/B/O NT_004686AL390780914811713  AC02419591378887241660024166
S/G/Y/R/B/O NT_004686AC114486915402663chr1NT_004686AC1048369171733632549002549
S/G/Y/R/B/O NT_004686AC104836917173363chr1NT_004686AL6631099185751330025372537
S/G/Y/R/B/O NT_004686AC104836917173363  AC0230669148117110303703794106831
S/G/Y/R/B/O NT_004686AL663109918575133chr1NT_004686AL4510109187224330000
S/G/Y/R/B/O NT_004686AL451010918722433         
S/G/Y/R/B/O NT_004686AL451010918722433chr1NT_034385AC095037826303541763862420116279968