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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_021877
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_021877AC0690012018008671chr1NT_021877AL59249420180600733951401122950743
S/G/Y/R/B/O NT_021877AL5924942018060073chr1NT_021877AL35817520197191530000
S/G/Y/R/B/O NT_021877AL3581752019719153chr1NT_021877AL07846320206566230196401964
S/G/Y/R/B/O NT_021877AL3581752019719153chr1NT_021877AC01341120223806813951701020049717
S/G/Y/R/B/O NT_021877AL0784632020656623chr1NT_021877AC0134112022380681162730016273
S/G/Y/R/B/O NT_021877AL0784632020656623  AL357493202247114838254816894997590
S/G/Y/R/B/O NT_021877AC0134112022380681chr1NT_021877AL16173620224711432589601359439490
S/G/Y/R/B/O NT_021877AC0134112022380681chr1NT_021877AC103539206507738139859116361017961674
S/G/Y/R/B/O NT_021877AC0134112022380681chr1NT_021877AL35817520197191533951701020049717
S/G/Y/R/B/O NT_021877AC0134112022380681  AC0100982019719151689977603000354662
S/G/Y/R/B/O NT_021877AL1617362022471143chr1NT_021877AL35468120235191630199901999
S/G/Y/R/B/O NT_021877AL3546812023519163chr1NT_021877AL59184620245760530199901999
S/G/Y/R/B/O NT_021877AL5918462024576053chr1NT_021877AL51331520265109032000002000
S/G/Y/R/B/O NT_021877AL5918462024576053  AL445652202351916910542934093988
S/G/Y/R/B/O NT_021877AL5918462024576053  AL4459932023519162473221882573652350
S/G/Y/R/B/O NT_021877AL5133152026510903chr1NT_021877AC09893520273353730000
S/G/Y/R/B/O NT_021877AL5133152026510903  AC06812220265109029437122692760469310
S/G/Y/R/B/O NT_021877AL5133152026510903  AL4456522026510905597179591145675386
S/G/Y/R/B/O NT_021877AL5133152026510903  AL4459932026510901728215110432136713
S/G/Y/R/B/O NT_021877AC0989352027335373chr1NT_021877AL58967220292410230199801998
S/G/Y/R/B/O NT_021877AC0989352027335373  AC023534202457605115407845622738146601
S/G/Y/R/B/O NT_021877AC0989352027335373  AC0681222024576054897841593003383170
S/G/Y/R/B/O NT_021877AL5896722029241023chr1NT_021877AL44549320292609630199901999
S/G/Y/R/B/O NT_021877AL4454932029260963chr1NT_021877AL59621820308303530000
S/G/Y/R/B/O NT_021877AL4454932029260963  AC0235342029260962685516272074149223
S/G/Y/R/B/O NT_021877AL5962182030830353chr1NT_021877AL39159720321197030199901999
S/G/Y/R/B/O NT_021877AL5962182030830353  AC031978202924102224790022479
S/G/Y/R/B/O NT_021877AL5962182030830353  AL3555272029241023606745211758258170
S/G/Y/R/B/O NT_021877AL5962182030830353  AL92888420321197011476100114761
S/G/Y/R/B/O NT_021877AL3915972032119703chr1NT_021877AL69145220335109430199601996
S/G/Y/R/B/O NT_021877AL3915972032119703  AC031978203211970106846034050140896
S/G/Y/R/B/O NT_021877AL3915972032119703  AL160003203211970603590060359
S/G/Y/R/B/O NT_021877AL3915972032119703  AL355527203211970145992125774024464
S/G/Y/R/B/O NT_021877AL6914522033510943chr1NT_021877AL13778920345738430000
S/G/Y/R/B/O NT_021877AL6914522033510943  AL160003203351094451932970048163
S/G/Y/R/B/O NT_021877AL1377892034573843chr1NT_021877AL36517820360070930199301993
S/G/Y/R/B/O NT_021877AL3651782036007093chr1NT_021877AL03520920366856030199601996
S/G/Y/R/B/O NT_021877AL0352092036685603chr1NT_021877AL35627520374611130199901999
S/G/Y/R/B/O NT_021877AL0352092036685603  AC084393203457384775040077504
S/G/Y/R/B/O NT_021877AL3562752037461113chr1NT_021877AL59013820394301632000002000
S/G/Y/R/B/O NT_021877AL3562752037461113  AC084393203600709693550069355
S/G/Y/R/B/O NT_021877AL3562752037461113  AL158017203668560731030073103
S/G/Y/R/B/O NT_021877AL5901382039430163chr1NT_021877AL60675320410507332000002000
S/G/Y/R/B/O NT_021877AL5901382039430163  AC016454203943016950990095099
S/G/Y/R/B/O NT_021877AL5901382039430163  AL158017203943016470610047061
S/G/Y/R/B/O NT_021877AL5901382039430163  AL391234203746111885735170093743
S/G/Y/R/B/O NT_021877AL6067532041050733chr1NT_021877AL66291820417005732000002000
S/G/Y/R/B/O NT_021877AL6067532041050733  AC016454204105073669740066974
S/G/Y/R/B/O NT_021877AL6067532041050733  AL355533204105073176024998299725597
S/G/Y/R/B/O NT_021877AL6067532041050733  AL3912342041050732712221152043749674
S/G/Y/R/B/O NT_021877AL6629182041700573chr1NT_021877AC09667420425819730199701997
S/G/Y/R/B/O NT_021877AL6629182041700573  AC010734204170057664530066453
S/G/Y/R/B/O NT_021877AL6629182041700573  AC026276204170057664560066456
S/G/Y/R/B/O NT_021877AL6629182041700573  AL391234204258197201150020115
S/G/Y/R/B/O NT_021877AC0966742042581973chr1NT_021877AL45118420443294430192901929
S/G/Y/R/B/O NT_021877AC0966742042581973  AC01073420410507383950023514107464
S/G/Y/R/B/O NT_021877AL4511842044329443chr1NT_021877AC09979320446859932000002000
S/G/Y/R/B/O NT_021877AC0997932044685993chr1NT_021877AC09342120463643430000
S/G/Y/R/B/O NT_021877AC0997932044685993  AC11975020446859911678900116789
S/G/Y/R/B/O NT_021877AC0934212046364343chr1NT_021877AL44525420482040832000002000
S/G/Y/R/B/O NT_021877AC0934212046364343  AC119750204432944546830054683
S/G/Y/R/B/O NT_021877AL4452542048204083chr1NT_021877AC10446520482675530199601996
S/G/Y/R/B/O NT_021877AC1044652048267553chr1NT_021877AC11856020496523136611006611
S/G/Y/R/B/O NT_021877AC1185602049652313chr1NT_021877AC092810204978868309370937
S/G/Y/R/B/O NT_021877AC0928102049788683chr1NT_021877AL5897412051518463547180054718
S/G/Y/R/B/O NT_021877AC0928102049788683  AC027737204826755225604652525232464
S/G/Y/R/B/O NT_021877AC0928102049788683  AL391066204965231801060080106
S/G/Y/R/B/O NT_021877AL5897412051518463chr1NT_021877AL03540820525645930199901999
S/G/Y/R/B/O NT_021877AL5897412051518463  AC02773720515184610451615537598113667
S/G/Y/R/B/O NT_021877AL5897412051518463  AL39106620525645913464400134644
S/G/Y/R/B/O NT_021877AL0354082052564593chr1NT_021877AL02375420534488930000
S/G/Y/R/B/O NT_021877AL0354082052564593  AC0277372052564592898825981121642802
S/G/Y/R/B/O NT_021877AL0237542053448893chr1NT_021877AL031316205502664300100100
S/G/Y/R/B/O NT_021877AL0313162055026643chr1NT_021877AL02239820560026430000
S/G/Y/R/B/O NT_021877AL0223982056002643chr1NT_021877AL022728205736092300100100
S/G/Y/R/B/O NT_021877AL0227282057360923chr1NT_021877AL035046205762516300100100
S/G/Y/R/B/O NT_021877AL0350462057625163chr1NT_021877AL02239920578239030000
S/G/Y/R/B/O NT_021877AL0223992057823903chr1NT_021877AL02239720586675430000
S/G/Y/R/B/O NT_021877AL0223972058667543chr1NT_021877AL51326320597595432001002001
S/G/Y/R/B/O NT_021877AL0223972058667543  AL3553352057360925063226072270575944
S/G/Y/R/B/O NT_021877AL5132632059759543chr1NT_021877AL03541420609950630199701997
S/G/Y/R/B/O NT_021877AL5132632059759543  AL355335206099506326416505039146
S/G/Y/R/B/O NT_021877AL5132632059759543  AL3569602060995061569924291290631034
S/G/Y/R/B/O NT_021877AL0354142060995063chr1NT_021877AL034351206228747300100100
S/G/Y/R/B/O NT_021877AL0354142060995063  AL356960206228747379791116354204103346
S/G/Y/R/B/O NT_021877AL0354142060995063  AL3600772062287474277301498357756
S/G/Y/R/B/O NT_021877AL0343512062287473chr1NT_021877AL59065320636632530199601996
S/G/Y/R/B/O NT_021877AL5906532063663253chr1NT_021877AC10353920650773810000
S/G/Y/R/B/O NT_021877AC1035392065077381         
S/G/Y/R/B/O NT_021877AC1035392065077381chr1NT_021877AC013411202238068139859116361017961674
S/G/Y/R/B/O NT_021877AC1035392065077381  AC010098206228747298255301858643712