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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_029223
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_029223AL591592556878293chr1NT_029223AC1196745574034930199801998
S/G/Y/R/B/O NT_029223AL591592556878293  AL35943255740349156524782918129615
S/G/Y/R/B/O NT_029223AC119674557403493chr1NT_029223AC099562557965213699820069982
S/G/Y/R/B/O NT_029223AC099562557965213chr1NT_029223AC099789559652883332440033244
S/G/Y/R/B/O NT_029223AC099562557965213  AL390015557403491514912295282330267
S/G/Y/R/B/O NT_029223AC099789559652883chr1NT_029223AL035705561062053709500070950
S/G/Y/R/B/O NT_029223AL035705561062053chr1NT_029223AL3602955616470630000
S/G/Y/R/B/O NT_029223AL360295561647063chr1NT_029223AL12199856215779300100100
S/G/Y/R/B/O NT_029223AL121998562157793chr1NT_029223AL16174056346867300100100
S/G/Y/R/B/O NT_029223AL121998562157793  AL365177561647066877681701985196797
S/G/Y/R/B/O NT_029223AL161740563468673chr1NT_029223AL3548835640562332000002000
S/G/Y/R/B/O NT_029223AL161740563468673  AL36517756405623409458052048997
S/G/Y/R/B/O NT_029223AL354883564056233chr1NT_029223AL0802785653963432000002000
S/G/Y/R/B/O NT_029223AL354883564056233  AL138779565396346388358012213491818
S/G/Y/R/B/O NT_029223AL354883564056233  AL15790756539634697040490074604
S/G/Y/R/B/O NT_029223AL080278565396343chr1NT_029223AL1392195664214730000
S/G/Y/R/B/O NT_029223AL080278565396343  AC00927856346867119760011976
S/G/Y/R/B/O NT_029223AL080278565396343  AC027234563468675239261153145789964
S/G/Y/R/B/O NT_029223AL080278565396343  AL157907563468674138926121307557076
S/G/Y/R/B/O NT_029223AL139219566421473chr1NT_029223AL3902435670690230199801998
S/G/Y/R/B/O NT_029223AL139219566421473  AC00927856405623613660240263768
S/G/Y/R/B/O NT_029223AL139219566421473  AC02723456405623550632116246859647
S/G/Y/R/B/O NT_029223AL390243567069023chr1NT_029223AL3550045678949730199801998
S/G/Y/R/B/O NT_029223AL390243567069023  AC00927856706902844370084437
S/G/Y/R/B/O NT_029223AL390243567069023  AC0272345670690218344919712026383
S/G/Y/R/B/O NT_029223AL355004567894973chr1NT_029223AL4422235680410632000002000
S/G/Y/R/B/O NT_029223AL355004567894973  AC00927856789497145690014569
S/G/Y/R/B/O NT_029223AL442223568041063chr1NT_029223AL3597395685678930199701997
S/G/Y/R/B/O NT_029223AL359739568567893chr1NT_029223AL6630855702507332000002000
S/G/Y/R/B/O NT_029223AL663085570250733chr1NT_029223AL6270905705421430199801998
S/G/Y/R/B/O NT_029223AL627090570542143chr1NT_029223AL1378555708965130000
S/G/Y/R/B/O NT_029223AL137855570896513chr1NT_029223AL10994457194621300100100
S/G/Y/R/B/O NT_029223AL109944571946213chr1NT_029223AL3918265733489430199701997
S/G/Y/R/B/O NT_029223AL109944571946213  AL39076157089651700120501875030
S/G/Y/R/B/O NT_029223AL391826573348943chr1NT_029223AL4451935740111832000002000
S/G/Y/R/B/O NT_029223AL391826573348943  AL139221571946211491090961818442190
S/G/Y/R/B/O NT_029223AL391826573348943  AL39076157194621594170059417
S/G/Y/R/B/O NT_029223AL445193574011183chr1NT_029223AL3653675746782032000002000
S/G/Y/R/B/O NT_029223AL445193574011183  AL13922157401118538320222956061
S/G/Y/R/B/O NT_029223AL365367574678203chr1NT_029223AL3573735755649430000
S/G/Y/R/B/O NT_029223AL365367574678203  AC015639573348943616301316849331
S/G/Y/R/B/O NT_029223AL357373575564943chr1NT_029223AC1044645764183430199701997
S/G/Y/R/B/O NT_029223AL357373575564943  AC015639574011186692501319280117
S/G/Y/R/B/O NT_029223AC104464576418343chr1NT_029223AL109845577936063341190034119
S/G/Y/R/B/O NT_029223AC104464576418343  AC01563957641834182650018265
S/G/Y/R/B/O NT_029223AC104464576418343  AL35987957556494700542533870681293
S/G/Y/R/B/O NT_029223AL109845577936063chr1NT_029223AL3651875788483732000002000
S/G/Y/R/B/O NT_029223AL109845577936063  AC02705257556494371412346446943956
S/G/Y/R/B/O NT_029223AL109845577936063  AL359879576418346541901945184870
S/G/Y/R/B/O NT_029223AL365187578848373chr1NT_029223AL0354115793336730198201982
S/G/Y/R/B/O NT_029223AL365187578848373  AC02500857884837304361853655538844
S/G/Y/R/B/O NT_029223AL365187578848373  AC02705257884837192915784025075
S/G/Y/R/B/O NT_029223AL035411579333673chr1NT_029223AL4500245807721630198701987
S/G/Y/R/B/O NT_029223AL035411579333673  AC025008577936061268640564127428
S/G/Y/R/B/O NT_029223AL035411579333673  AC02705257793606579420670664648
S/G/Y/R/B/O NT_029223AL450024580772163chr1NT_029223AL1369855809576830017621762
S/G/Y/R/B/O NT_029223AL136985580957683chr1NT_029223AL6067625823643230199901999
S/G/Y/R/B/O NT_029223AL606762582364323chr1NT_029223AC1052775825737932000002000
S/G/Y/R/B/O NT_029223AC105277582573793chr1NT_029223AL5924315841512030199501995
S/G/Y/R/B/O NT_029223AC105277582573793  AC08017758095768596012280118412100814
S/G/Y/R/B/O NT_029223AL592431584151203chr1NT_029223AC0934255846377832022002022
S/G/Y/R/B/O NT_029223AC093425584637783chr1NT_029223AL59632258641255311055900110559
S/G/Y/R/B/O NT_029223AC093425584637783  AC016336582573796208725072255287146
S/G/Y/R/B/O NT_029223AC093425584637783  AL13890358257379855210646591986
S/G/Y/R/B/O NT_029223AL596322586412553chr1NT_029223AC0934245865974032000002000
S/G/Y/R/B/O NT_029223AL596322586412553  AC01633658641255729712507835283830
S/G/Y/R/B/O NT_029223AL596322586412553  AC02579358641255144820014482
S/G/Y/R/B/O NT_029223AL596322586412553  AL13890358463778611630061163
S/G/Y/R/B/O NT_029223AC093424586597403chr1NT_029223AC069129588115931211823444452529151
S/G/Y/R/B/O NT_029223AC093424586597403  AC02579358463778892260214991375
S/G/Y/R/B/O NT_029223AC069129588115931chr1NT_029223AL3902345884994133808432372920770528
S/G/Y/R/B/O NT_029223AC069129588115931  AC0136105864125524833160903184872771
S/G/Y/R/B/O NT_029223AL390234588499413chr1NT_029223AL7138595897641130199901999
S/G/Y/R/B/O NT_029223AL390234588499413  AC013610588499415162314653977176047
S/G/Y/R/B/O NT_029223AL713859589764113