Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_030584
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_030584AL049569163082343chr1NT_030584AL5906441652473130000
S/G/Y/R/B/O NT_030584AL049569163082343  AC02602123044557897038045425142463
S/G/Y/R/B/O NT_030584AL590644165247313chr1NT_030584AL1387981668759030017101710
S/G/Y/R/B/O NT_030584AL590644165247313  AF188031230445578537840053784
S/G/Y/R/B/O NT_030584AL590644165247313  AF209070230445578488181936123251986
S/G/Y/R/B/O NT_030584AL138798166875903chr1NT_030584AC0048241669405530036723672
S/G/Y/R/B/O NT_030584AC004824166940553chr1NT_030584AL3909941682956130199301993
S/G/Y/R/B/O NT_030584AC004824166940553  AF20907016524731367326790278246304
S/G/Y/R/B/O NT_030584AC004824166940553  AF20907016524731367326790278246304
S/G/Y/R/B/O NT_030584AL390994168295613chr1NT_030584AL1392501694269730199601996
S/G/Y/R/B/O NT_030584AL139250169426973chr1NT_030584AL3585931695418832000002000
S/G/Y/R/B/O NT_030584AL358593169541883chr1NT_030584AL1365291709464230199801998
S/G/Y/R/B/O NT_030584AL358593169541883  AC02694216829561694212320102172762
S/G/Y/R/B/O NT_030584AL136529170946423chr1NT_030584AL35655217246670300100100
S/G/Y/R/B/O NT_030584AL136529170946423  AC026942169426976462701098875615
S/G/Y/R/B/O NT_030584AL136529170946423  AL35879516954188688030948878291
S/G/Y/R/B/O NT_030584AL136529170946423  AL359492169541885384801831072158
S/G/Y/R/B/O NT_030584AL356552172466703chr1NT_030584AL3558751727220330199401994
S/G/Y/R/B/O NT_030584AL356552172466703  AL35879517272203253630025363
S/G/Y/R/B/O NT_030584AL355875172722033chr1NT_030584AL3575091731956530199701997
S/G/Y/R/B/O NT_030584AL355875172722033  AL35879517319565483190048319
S/G/Y/R/B/O NT_030584AL357509173195653chr1NT_030584AL929269174066691294470029447
S/G/Y/R/B/O NT_030584AL357509173195653  AL358795172722035155723051090064762
S/G/Y/R/B/O NT_030584AL929269174066691chr1NT_030584AL36520917425113311500100115001
S/G/Y/R/B/O NT_030584AL929269174066691chr1NT_030584AL359738175404043386200038620
S/G/Y/R/B/O NT_030584AL929269174066691chr1NT_030584AL359738175404043386200038620
S/G/Y/R/B/O NT_030584AL929269174066691  AC02058717406669123645203130810156486
S/G/Y/R/B/O NT_030584AL929269174066691  AC02058717406669123645203130810156486
S/G/Y/R/B/O NT_030584AL929269174066691  AL64590617425113203710020371
S/G/Y/R/B/O NT_030584AL929269174066691  AL64590617425113203710020371
S/G/Y/R/B/O NT_030584AL365209174251133chr1NT_030584AL3597381754040432000002000
S/G/Y/R/B/O NT_030584AL365209174251133  AC0205871742511385257203619403106696
S/G/Y/R/B/O NT_030584AL365209174251133  AL64590617540404204000020400
S/G/Y/R/B/O NT_030584AL359738175404043chr1NT_030584AL0503421761595930199601996
S/G/Y/R/B/O NT_030584AL359738175404043chr1NT_030584AL929269174066691386200038620
S/G/Y/R/B/O NT_030584AL359738175404043chr1NT_030584AL929269174066691386200038620
S/G/Y/R/B/O NT_030584AL359738175404043  AC02058717406669425490042549
S/G/Y/R/B/O NT_030584AL050342176159593chr1NT_030584AL3561011773081630199801998
S/G/Y/R/B/O NT_030584AL050342176159593  AC068430174066694995141321753171614
S/G/Y/R/B/O NT_030584AL356101177308163chr1NT_030584AL5918961775278332000002000
S/G/Y/R/B/O NT_030584AL356101177308163  AC06843017540404148914228019119
S/G/Y/R/B/O NT_030584AL591896177527833chr1NT_030584AL0317371786810330199801998
S/G/Y/R/B/O NT_030584AL591896177527833  AC06843017752783497827673372261177
S/G/Y/R/B/O NT_030584AL031737178681033chr1NT_030584AL02152817999863300108108
S/G/Y/R/B/O NT_030584AL031737178681033  AL35752117999863309120030912
S/G/Y/R/B/O NT_030584AL021528179998633chr1NT_030584AL8317551813587930200002000
S/G/Y/R/B/O NT_030584AL021528179998633  AL3575211786810310356202369105931
S/G/Y/R/B/O NT_030584AL021528179998633  AL51232217868103208050020805
S/G/Y/R/B/O NT_030584AL021528179998633  AL5135451786810399184580126354131339
S/G/Y/R/B/O NT_030584AL021528179998633  AL83170917868103120830012083
S/G/Y/R/B/O NT_030584AL831755181358793         
S/G/Y/R/B/O NT_030584AL831755181358793  AL35752117999863154400015440
S/G/Y/R/B/O NT_030584AL831755181358793  AL51354517999863222580022258