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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_034471 NT_037484 NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917
NT_028054 NT_032967 NT_021937 NT_004873 NT_030584 NT_029218 NT_004610 NT_004391
NT_004782 NT_037485 NT_028053 NT_004538 NT_034379 NT_037486 NT_034429 NT_004511
NT_037487 NT_004852 NT_032977 NT_029223 NT_029865 NT_004636 NT_032948 NT_004464
NT_034383 NT_004483 NT_037488 NT_004902 NT_034385 NT_026943 NT_034386 NT_029231
NT_004658 NT_004686 NT_037489 NT_021979 NT_034389 NT_037490 NT_034392 NT_028050
NT_030567 NT_021977 NT_029860 NT_037491 NT_019273 NT_004754 NT_022052 NT_022071
NT_004434 NT_037492 NT_037493 NT_037494 NT_034398 NT_034400 NT_034401 NT_034402
NT_034403 NT_037495 NT_032962 NT_037496 NT_021907 NT_037497 NT_004858 NT_037498
NT_004668 NT_037499 NT_029874 NT_004487 NT_037500 NT_021905 NT_004671 NT_029862
NT_034408 NT_034409 NT_037501 NT_034410 NT_034411 NT_021877 NT_034412 NT_004612
NT_037503 NT_021953 NT_004861 NT_004525 NT_004559 NT_031728 NT_021973 NT_004753
NT_004433 NT_030561 NT_004836 NT_004734 NT_004536 NT_032964 NT_037504 NT_037505
NT_031730 NT_029870 NT_032969 NT_032968


  NT_004671
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004671AL5963421875120203chr1NT_004671AL51317518766698830015321532
S/G/Y/R/B/O NT_004671AL5963421875120203  AL391274187428241196070019607
S/G/Y/R/B/O NT_004671AL5131751876669883chr1NT_004671AL35756618775916332000002000
S/G/Y/R/B/O NT_004671AL5131751876669883  AL391274187759163382202620488345723
S/G/Y/R/B/O NT_004671AL3575661877591633chr1NT_004671AL39095718781816730000
S/G/Y/R/B/O NT_004671AL3909571878181673chr1NT_004671AL13698718797002330015651565
S/G/Y/R/B/O NT_004671AL1369871879700233chr1NT_004671AL59611918809058530199201992
S/G/Y/R/B/O NT_004671AL5961191880905853chr1NT_004671AL13645418813865232000002000
S/G/Y/R/B/O NT_004671AL1364541881386523chr1NT_004671AL03540718826634130000
S/G/Y/R/B/O NT_004671AL1364541881386523  AL3571131879700235742902002777456
S/G/Y/R/B/O NT_004671AL0354071882663413chr1NT_004671AL35939018837732030199701997
S/G/Y/R/B/O NT_004671AL0354071882663413  AL357113188090585450540045054
S/G/Y/R/B/O NT_004671AL3593901883773203chr1NT_004671AL13637018845907032000002000
S/G/Y/R/B/O NT_004671AL3593901883773203  AL358172188459070372861990039276
S/G/Y/R/B/O NT_004671AL1363701884590703chr1NT_004671AL39086318860504832000002000
S/G/Y/R/B/O NT_004671AL1363701884590703  AC0040851884590703010604798378089
S/G/Y/R/B/O NT_004671AL1363701884590703  AC0040851884590703010604798378089
S/G/Y/R/B/O NT_004671AL1363701884590703  AL35817218845907012355102220125771
S/G/Y/R/B/O NT_004671AL3908631886050483chr1NT_004671AL13913318872591230000
S/G/Y/R/B/O NT_004671AL3908631886050483  AC004085188605048204260020426
S/G/Y/R/B/O NT_004671AL3908631886050483  AC004085188605048204260020426
S/G/Y/R/B/O NT_004671AL1391331887259123chr1NT_004671AL35885718874363230199901999
S/G/Y/R/B/O NT_004671AL3588571887436323chr1NT_004671AL13877818885869030018311831
S/G/Y/R/B/O NT_004671AL1387781888586903chr1NT_004671AL16017318902454730017621762
S/G/Y/R/B/O NT_004671AL1387781888586903  AL3918311887436322867705762486301
S/G/Y/R/B/O NT_004671AL1601731890245473chr1NT_004671AL35779318905595430000
S/G/Y/R/B/O NT_004671AL3577931890559543chr1NT_004671AL16000118919958432000002000
S/G/Y/R/B/O NT_004671AL3577931890559543  AL391831189199584478420047842
S/G/Y/R/B/O NT_004671AL1600011891995843chr1NT_004671AL15783718922534632000002000
S/G/Y/R/B/O NT_004671AL1578371892253463chr1NT_004671AL15808118936283130000
S/G/Y/R/B/O NT_004671AL1578371892253463  AL161634189199584248183313028131
S/G/Y/R/B/O NT_004671AL1580811893628313chr1NT_004671AL13645618942455530000
S/G/Y/R/B/O NT_004671AL1580811893628313  AL161634189199584243990024399
S/G/Y/R/B/O NT_004671AL1364561894245553chr1NT_004671AL35627218958130030198101981
S/G/Y/R/B/O NT_004671AL1364561894245553  AC01557818919958486085022741108826
S/G/Y/R/B/O NT_004671AL1364561894245553  AL161634189199584295410915538696
S/G/Y/R/B/O NT_004671AL3562721895813003chr1NT_004671AL59117118967247930199901999
S/G/Y/R/B/O NT_004671AL3562721895813003  AC015578189581300325680032568
S/G/Y/R/B/O NT_004671AL3562721895813003  AC024006189581300336690033669
S/G/Y/R/B/O NT_004671AL5911711896724793chr1NT_004671AL13921418968373830199901999
S/G/Y/R/B/O NT_004671AL5911711896724793  AC024006189672479132570013257
S/G/Y/R/B/O NT_004671AL1392141896837383chr1NT_004671AL51334818982429332000002000
S/G/Y/R/B/O NT_004671AL1392141896837383  AC024006189581300832270083227
S/G/Y/R/B/O NT_004671AL5133481898242933chr1NT_004671AL51322618996093432000002000
S/G/Y/R/B/O NT_004671AL5132261899609343chr1NT_004671AL59220318998765132000002000
S/G/Y/R/B/O NT_004671AL5132261899609343  AL513330189960934197070019707
S/G/Y/R/B/O NT_004671AL5922031899876513chr1NT_004671AL73186919016718630200002000
S/G/Y/R/B/O NT_004671AL5922031899876513  AL51333018996093417014425128579181235
S/G/Y/R/B/O NT_004671AL7318691901671863chr1NT_004671AL35307219017258930016641664
S/G/Y/R/B/O NT_004671AL3530721901725893chr1NT_004671AL16005719034227132000002000
S/G/Y/R/B/O NT_004671AL3530721901725893  AC025037189987651908141036863933165115
S/G/Y/R/B/O NT_004671AL3530721901725893  AL772331190167186697990101573171372
S/G/Y/R/B/O NT_004671AL1600571903422713chr1NT_004671AL35793219044759932000002000
S/G/Y/R/B/O NT_004671AL1600571903422713  AC027067190167186808247599520593628
S/G/Y/R/B/O NT_004671AL3579321904475993chr1NT_004671AL16173819062538030000
S/G/Y/R/B/O NT_004671AL3579321904475993  AC024510190447599189254364630329592
S/G/Y/R/B/O NT_004671AL3579321904475993  AL353139190342271876152447504095102
S/G/Y/R/B/O NT_004671AL3579321904475993  AL3562931903422711363401622529859
S/G/Y/R/B/O NT_004671AL1617381906253803chr1NT_004671AL13892619077222432000002000
S/G/Y/R/B/O NT_004671AL1617381906253803  AC024510190342271519668243060209
S/G/Y/R/B/O NT_004671AL1389261907722243chr1NT_004671AL35811919093938630000
S/G/Y/R/B/O NT_004671AL1389261907722243  AC0136771907722246130001588877188
S/G/Y/R/B/O NT_004671AL1389261907722243  AL360016190625380517450051745
S/G/Y/R/B/O NT_004671AL3581191909393863chr1NT_004671AL16239819109451030195201952
S/G/Y/R/B/O NT_004671AL3581191909393863  AL3600161910945101899801176730765
S/G/Y/R/B/O NT_004671AL1623981910945103chr1NT_004671AL35370919112544230000
S/G/Y/R/B/O NT_004671AL3537091911254423chr1NT_004671AL59230819125686030199801998
S/G/Y/R/B/O NT_004671AL3537091911254423  AC05580519093938611471000114710
S/G/Y/R/B/O NT_004671AL5923081912568603chr1NT_004671AL64575419142544130199201992
S/G/Y/R/B/O NT_004671AL5923081912568603  AC0188741912568603018301290543088
S/G/Y/R/B/O NT_004671AL5923081912568603  AC055805191256860372791767039046
S/G/Y/R/B/O NT_004671AL6457541914254413chr1NT_004671AL59214419143842830194701947
S/G/Y/R/B/O NT_004671AL5921441914384283chr1NT_004671AL13913719163257330117701177
S/G/Y/R/B/O NT_004671AL5921441914384283  AC0188741912568604384904542589274
S/G/Y/R/B/O NT_004671AL1391371916325733chr1NT_004671AL13893119176984230199801998
S/G/Y/R/B/O NT_004671AL1389311917698423chr1NT_004671AL35885319186352332000002000
S/G/Y/R/B/O NT_004671AL3588531918635233chr1NT_004671AL59160419192357232000002000
S/G/Y/R/B/O NT_004671AL5916041919235723chr1NT_004671AL04974419210713232000002000
S/G/Y/R/B/O NT_004671AL5916041919235723  AL161735192107132226320022632
S/G/Y/R/B/O NT_004671AL0497441921071323chr1NT_004671AL04974119225575830000
S/G/Y/R/B/O NT_004671AL0497411922557583         
S/G/Y/R/B/O NT_004671AL0497411922557583  AC0260561919235723467803318667864