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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_016714 | AC106775 | 137531315 | 3 | chr5 | NT_016714 | AC092318 | 137668901 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_016714 | AC092318 | 137668901 | 3 | chr5 | NT_016714 | AC106791 | 137746155 | 3 | 37354 | 0 | 0 | 37354 |
S/G/Y/R/B/O |
NT_016714 | AC092318 | 137668901 | 3 |   |   | AC073206 | 137434160 | | 15828 | 5410 | 12270 | 33508 |
S/G/Y/R/B/O |
NT_016714 | AC092318 | 137668901 | 3 |   |   | AC116356 | 137746155 | | 25159 | 0 | 0 | 25159 |
S/G/Y/R/B/O |
NT_016714 | AC106791 | 137746155 | 3 | chr5 | NT_016714 | AC106753 | 137925666 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_016714 | AC106791 | 137746155 | 3 |   |   | AC073206 | 137746155 | | 110269 | 7471 | 60683 | 178423 |
S/G/Y/R/B/O |
NT_016714 | AC106753 | 137925666 | 3 | chr5 | NT_016714 | AC113382 | 138017737 | 1 | 4343 | 0 | 0 | 4343 |
S/G/Y/R/B/O |
NT_016714 | AC106753 | 137925666 | 3 |   |   | AC113341 | 137668901 | | 21558 | 0 | 0 | 21558 |
S/G/Y/R/B/O |
NT_016714 | AC113382 | 138017737 | 1 | chr5 | NT_016714 | AC109442 | 138146404 | 3 | 35642 | 0 | 623 | 36265 |
S/G/Y/R/B/O |
NT_016714 | AC113382 | 138017737 | 1 |   |   | AC004826 | 138017737 | | 105432 | 0 | 12234 | 117666 |
S/G/Y/R/B/O |
NT_016714 | AC113382 | 138017737 | 1 |   |   | AC004826 | 138017737 | | 105432 | 0 | 12234 | 117666 |
S/G/Y/R/B/O |
NT_016714 | AC113382 | 138017737 | 1 |   |   | AC021854 | 138017737 | | 80131 | 6677 | 24040 | 110848 |
S/G/Y/R/B/O |
NT_016714 | AC113382 | 138017737 | 1 |   |   | AC113341 | 138146404 | | 20240 | 0 | 0 | 20240 |
S/G/Y/R/B/O |
NT_016714 | AC109442 | 138146404 | 3 | chr5 | NT_016714 | AC106752 | 138217479 | 3 | 27975 | 0 | 0 | 27975 |
S/G/Y/R/B/O |
NT_016714 | AC109442 | 138146404 | 3 |   |   | AC004826 | 138146404 | | 71054 | 2052 | 2013 | 75119 |
S/G/Y/R/B/O |
NT_016714 | AC109442 | 138146404 | 3 |   |   | AC004826 | 138146404 | | 71054 | 2052 | 2013 | 75119 |
S/G/Y/R/B/O |
NT_016714 | AC106752 | 138217479 | 3 | chr5 | NT_016714 | AC104116 | 138285373 | 3 | 2917 | 0 | 0 | 2917 |
S/G/Y/R/B/O |
NT_016714 | AC106752 | 138217479 | 3 |   |   | AC004826 | 138017737 | | 73996 | 0 | 0 | 73996 |
S/G/Y/R/B/O |
NT_016714 | AC106752 | 138217479 | 3 |   |   | AC004826 | 138017737 | | 73996 | 0 | 0 | 73996 |
S/G/Y/R/B/O |
NT_016714 | AC104116 | 138285373 | 3 | chr5 | NT_016714 | AC113403 | 138384069 | 3 | 2779 | 0 | 0 | 2779 |
S/G/Y/R/B/O |
NT_016714 | AC113403 | 138384069 | 3 | chr5 | NT_016714 | AC011385 | 138524701 | 3 | 28669 | 0 | 0 | 28669 |
S/G/Y/R/B/O |
NT_016714 | AC113403 | 138384069 | 3 |   |   | AC004821 | 138384069 | | 111194 | 0 | 0 | 111194 |
S/G/Y/R/B/O |
NT_016714 | AC113403 | 138384069 | 3 |   |   | AC011381 | 138384069 | | 70245 | 0 | 0 | 70245 |
S/G/Y/R/B/O |
NT_016714 | AC011385 | 138524701 | 3 | chr5 | NT_016714 | AC113340 | 138659300 | 3 | 79757 | 0 | 0 | 79757 |
S/G/Y/R/B/O |
NT_016714 | AC011385 | 138524701 | 3 |   |   | AC011381 | 138285373 | | 65581 | 0 | 0 | 65581 |
S/G/Y/R/B/O |
NT_016714 | AC113340 | 138659300 | 3 | chr5 | NT_016714 | AC010453 | 138664205 | 3 | 4906 | 0 | 0 | 4906 |
S/G/Y/R/B/O |
NT_016714 | AC113340 | 138659300 | 3 |   |   | AC011381 | 138664205 | | 10826 | 0 | 0 | 10826 |
S/G/Y/R/B/O |
NT_016714 | AC010453 | 138664205 | 3 | chr5 | NT_016714 | AC034243 | 138747885 | 3 | 0 | 0 | 29073 | 29073 |
S/G/Y/R/B/O |
NT_016714 | AC010453 | 138664205 | 3 |   |   | AC034204 | 138524701 | | 17371 | 0 | 0 | 17371 |
S/G/Y/R/B/O |
NT_016714 | AC010453 | 138664205 | 3 |   |   | AC073484 | 138747885 | | 11062 | 3305 | 18151 | 32518 |
S/G/Y/R/B/O |
NT_016714 | AC010453 | 138664205 | 3 |   |   | AC109440 | 138747885 | | 79837 | 0 | 0 | 79837 |
S/G/Y/R/B/O |
NT_016714 | AC034243 | 138747885 | 3 | chr5 | NT_016714 | AC011405 | 138909893 | 3 | 0 | 0 | 32147 | 32147 |
S/G/Y/R/B/O |
NT_016714 | AC034243 | 138747885 | 3 |   |   | AC073484 | 138909893 | | 17525 | 1928 | 38855 | 58308 |
S/G/Y/R/B/O |
NT_016714 | AC011405 | 138909893 | 3 | chr5 | NT_016714 | AC011378 | 139062115 | 3 | 25651 | 0 | 0 | 25651 |
S/G/Y/R/B/O |
NT_016714 | AC011378 | 139062115 | 3 | chr5 | NT_016714 | AC008614 | 139148821 | 3 | 15110 | 0 | 0 | 15110 |
S/G/Y/R/B/O |
NT_016714 | AC008614 | 139148821 | 3 | chr5 | NT_016714 | AC011404 | 139259117 | 3 | 2467 | 0 | 0 | 2467 |
S/G/Y/R/B/O |
NT_016714 | AC011404 | 139259117 | 3 | chr5 | NT_016714 | AC108080 | 139380581 | 3 | 92357 | 0 | 0 | 92357 |
S/G/Y/R/B/O |
NT_016714 | AC011404 | 139259117 | 3 |   |   | AC135457 | 139380581 | | 100464 | 0 | 0 | 100464 |
S/G/Y/R/B/O |
NT_016714 | AC108080 | 139380581 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016714 | AC108080 | 139380581 | 3 |   |   | AC135457 | 139259117 | | 156219 | 0 | 0 | 156219 |
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