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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037664 | AC114296 | 135787628 | 3 | chr5 | NT_037664 | AC011427 | 135827078 | 3 | 16877 | 0 | 0 | 16877 |
S/G/Y/R/B/O |
NT_037664 | AC011427 | 135827078 | 3 | chr5 | NT_037664 | AC002428 | 135889327 | 3 | 14378 | 0 | 0 | 14378 |
S/G/Y/R/B/O |
NT_037664 | AC011427 | 135827078 | 3 |   |   | AC004763 | 135889327 | | 17724 | 0 | 0 | 17724 |
S/G/Y/R/B/O |
NT_037664 | AC002428 | 135889327 | 3 | chr5 | NT_037664 | AC004503 | 136018795 | 3 | 39772 | 0 | 0 | 39772 |
S/G/Y/R/B/O |
NT_037664 | AC002428 | 135889327 | 3 |   |   | AC004627 | 136018795 | | 21187 | 0 | 0 | 21187 |
S/G/Y/R/B/O |
NT_037664 | AC002428 | 135889327 | 3 |   |   | AC004763 | 136018795 | | 83608 | 0 | 0 | 83608 |
S/G/Y/R/B/O |
NT_037664 | AC004503 | 136018795 | 3 | chr5 | NT_037664 | AC005219 | 136054982 | 3 | 0 | 549 | 0 | 549 |
S/G/Y/R/B/O |
NT_037664 | AC005219 | 136054982 | 3 | chr5 | NT_037664 | AC009014 | 136129384 | 3 | 14484 | 0 | 0 | 14484 |
S/G/Y/R/B/O |
NT_037664 | AC009014 | 136129384 | 3 | chr5 | NT_037664 | AC008661 | 136203242 | 3 | 18184 | 0 | 0 | 18184 |
S/G/Y/R/B/O |
NT_037664 | AC008661 | 136203242 | 3 | chr5 | NT_037664 | AC063980 | 136373606 | 3 | 27734 | 0 | 0 | 27734 |
S/G/Y/R/B/O |
NT_037664 | AC008661 | 136203242 | 3 |   |   | AC026299 | 136129384 | | 53283 | 0 | 1389 | 54672 |
S/G/Y/R/B/O |
NT_037664 | AC063980 | 136373606 | 3 | chr5 | NT_037664 | AC112178 | 136395118 | 3 | 19809 | 0 | 0 | 19809 |
S/G/Y/R/B/O |
NT_037664 | AC063980 | 136373606 | 3 |   |   | AC004220 | 136373606 | | 18844 | 0 | 0 | 18844 |
S/G/Y/R/B/O |
NT_037664 | AC063980 | 136373606 | 3 |   |   | AC026299 | 136203242 | | 43789 | 0 | 1389 | 45178 |
S/G/Y/R/B/O |
NT_037664 | AC112178 | 136395118 | 3 | chr5 | NT_037664 | AC110721 | 136535139 | 3 | 26938 | 0 | 0 | 26938 |
S/G/Y/R/B/O |
NT_037664 | AC112178 | 136395118 | 3 |   |   | AC004220 | 136395118 | | 83548 | 0 | 0 | 83548 |
S/G/Y/R/B/O |
NT_037664 | AC112178 | 136395118 | 3 |   |   | AC026299 | 136395118 | | 53855 | 2171 | 1545 | 57571 |
S/G/Y/R/B/O |
NT_037664 | AC110721 | 136535139 | 3 | chr5 | NT_037664 | AC114301 | 136672701 | 3 | 98414 | 0 | 0 | 98414 |
S/G/Y/R/B/O |
NT_037664 | AC114301 | 136672701 | 3 | chr5 | NT_037664 | AC026812 | 136737178 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037664 | AC026812 | 136737178 | 3 | chr5 | NT_037664 | AC109439 | 136742506 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037664 | AC109439 | 136742506 | 3 | chr5 | NT_037664 | AC005213 | 136892964 | 3 | 0 | 0 | 6022 | 6022 |
S/G/Y/R/B/O |
NT_037664 | AC109439 | 136742506 | 3 |   |   | AC108113 | 136892964 | | 21341 | 0 | 0 | 21341 |
S/G/Y/R/B/O |
NT_037664 | AC005213 | 136892964 | 3 | chr5 | NT_037664 | AC106746 | 136989070 | 3 | 4420 | 0 | 0 | 4420 |
S/G/Y/R/B/O |
NT_037664 | AC005213 | 136892964 | 3 |   |   | AC011425 | 136892964 | | 14145 | 2352 | 0 | 16497 |
S/G/Y/R/B/O |
NT_037664 | AC106746 | 136989070 | 3 | chr5 | NT_037664 | AC092270 | 137164516 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037664 | AC106746 | 136989070 | 3 |   |   | AC004592 | 136742506 | | 130325 | 0 | 0 | 130325 |
S/G/Y/R/B/O |
NT_037664 | AC106746 | 136989070 | 3 |   |   | AC011425 | 136892964 | | 44075 | 0 | 15209 | 59284 |
S/G/Y/R/B/O |
NT_037664 | AC092270 | 137164516 | 3 | chr5 | NT_037664 | AC091818 | 137249292 | 3 | 23528 | 0 | 0 | 23528 |
S/G/Y/R/B/O |
NT_037664 | AC092270 | 137164516 | 3 |   |   | AC004592 | 136892964 | | 15617 | 0 | 0 | 15617 |
S/G/Y/R/B/O |
NT_037664 | AC092270 | 137164516 | 3 |   |   | AC011833 | 136892964 | | 69758 | 1925 | 0 | 71683 |
S/G/Y/R/B/O |
NT_037664 | AC092270 | 137164516 | 3 |   |   | AC106751 | 137249292 | | 99687 | 0 | 0 | 99687 |
S/G/Y/R/B/O |
NT_037664 | AC091818 | 137249292 | 3 | chr5 | NT_037664 | AC106787 | 137327614 | 3 | 23106 | 0 | 0 | 23106 |
S/G/Y/R/B/O |
NT_037664 | AC091818 | 137249292 | 3 |   |   | AC003998 | 137249292 | | 45152 | 0 | 0 | 45152 |
S/G/Y/R/B/O |
NT_037664 | AC091818 | 137249292 | 3 |   |   | AC011833 | 137249292 | | 80681 | 0 | 9343 | 90024 |
S/G/Y/R/B/O |
NT_037664 | AC091818 | 137249292 | 3 |   |   | AC106751 | 137164516 | | 18820 | 0 | 0 | 18820 |
S/G/Y/R/B/O |
NT_037664 | AC106787 | 137327614 | 3 | chr5 | NT_037664 | AC106809 | 137434160 | 1 | 9782 | 0 | 50080 | 59862 |
S/G/Y/R/B/O |
NT_037664 | AC106787 | 137327614 | 3 |   |   | AC011833 | 137327614 | | 12800 | 0 | 0 | 12800 |
S/G/Y/R/B/O |
NT_037664 | AC106809 | 137434160 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037664 | AC106809 | 137434160 | 1 |   |   | AC074256 | 137434160 | | 33602 | 7166 | 40626 | 81394 |
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