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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_034766 | AC113430 | 50001 | 1 | chr5 | NT_034766 | AC021087 | 176675 | 2 | 11842 | 1805 | 24033 | 37680 |
S/G/Y/R/B/O |
NT_034766 | AC113430 | 50001 | 1 |   |   | AC010443 | 191610999 | | 29032 | 0 | 66452 | 95484 |
S/G/Y/R/B/O |
NT_034766 | AC113430 | 50001 | 1 |   |   | AC027825 | 176675 | | 55105 | 13265 | 10484 | 78854 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 | chr5 | NT_034766 | AC118458 | 307963 | 1 | 22878 | 1807 | 0 | 24685 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 |   |   | AC010443 | 176675 | | 124594 | 0 | 609 | 125203 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 |   |   | AC027825 | 176675 | | 15076 | 2497 | 541 | 18114 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 |   |   | AC060789 | 176675 | | 11216 | 3798 | 2120 | 17134 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 |   |   | AC061972 | 176675 | | 13342 | 7679 | 1274 | 22295 |
S/G/Y/R/B/O |
NT_034766 | AC021087 | 176675 | 2 |   |   | AC061974 | 176675 | | 13854 | 1894 | 1060 | 16808 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 | chr5 | NT_034766 | AC084098 | 331861 | 1 | 101565 | 6069 | 25098 | 132732 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 | chr5 | NT_034766 | AC010442 | 411019 | 2 | 78742 | 0 | 6563 | 85305 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 |   |   | AC060789 | 176675 | | 78266 | 8936 | 65572 | 152774 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 |   |   | AC061972 | 176675 | | 109438 | 12324 | 9694 | 131456 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 |   |   | AC061974 | 176675 | | 106745 | 2001 | 23979 | 132725 |
S/G/Y/R/B/O |
NT_034766 | AC118458 | 307963 | 1 |   |   | AC113363 | 1648141 | | 61892 | 2399 | 43974 | 108265 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 | chr5 | NT_034766 | AC010442 | 411019 | 2 | 77769 | 4091 | 1133 | 82993 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 | chr5 | NT_034766 | AC106772 | 541323 | 2 | 14817 | 0 | 1134 | 15951 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 |   |   | AC060789 | 176675 | | 100913 | 10054 | 18738 | 129705 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 |   |   | AC061972 | 176675 | | 86619 | 11800 | 12400 | 110819 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 |   |   | AC061974 | 176675 | | 87583 | 6864 | 19407 | 113854 |
S/G/Y/R/B/O |
NT_034766 | AC084098 | 331861 | 1 |   |   | AC113363 | 541323 | | 71827 | 5129 | 38127 | 115083 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 | chr5 | NT_034766 | AC106772 | 541323 | 2 | 34995 | 1797 | 0 | 36792 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 | chr5 | NT_034766 | AC118458 | 307963 | 1 | 78742 | 0 | 6563 | 85305 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 |   |   | AC060789 | 307963 | | 54573 | 0 | 0 | 54573 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 |   |   | AC061972 | 307963 | | 70899 | 7866 | 5397 | 84162 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 |   |   | AC061974 | 307963 | | 70860 | 4941 | 15397 | 91198 |
S/G/Y/R/B/O |
NT_034766 | AC010442 | 411019 | 2 |   |   | AC113363 | 541323 | | 114087 | 4254 | 4213 | 122554 |
S/G/Y/R/B/O |
NT_034766 | AC106772 | 541323 | 2 | chr5 | NT_034766 | AC026740 | 635219 | 1 | 2445 | 0 | 14282 | 16727 |
S/G/Y/R/B/O |
NT_034766 | AC106772 | 541323 | 2 | chr5 | NT_034766 | AC084098 | 331861 | 1 | 14817 | 0 | 1134 | 15951 |
S/G/Y/R/B/O |
NT_034766 | AC106772 | 541323 | 2 |   |   | AC060806 | 635219 | | 72753 | 17366 | 4950 | 95069 |
S/G/Y/R/B/O |
NT_034766 | AC106772 | 541323 | 2 |   |   | AC113363 | 331861 | | 68947 | 1463 | 7166 | 77576 |
S/G/Y/R/B/O |
NT_034766 | AC106772 | 541323 | 2 |   |   | AC113428 | 331861 | | 29204 | 2812 | 41329 | 73345 |
S/G/Y/R/B/O |
NT_034766 | AC026740 | 635219 | 1 | chr5 | NT_034766 | AC010427 | 818693 | 1 | 2935 | 9701 | 36710 | 49346 |
S/G/Y/R/B/O |
NT_034766 | AC026740 | 635219 | 1 |   |   | AC025172 | 818693 | | 36202 | 0 | 15089 | 51291 |
S/G/Y/R/B/O |
NT_034766 | AC026740 | 635219 | 1 |   |   | AC060806 | 818693 | | 38959 | 7899 | 39410 | 86268 |
S/G/Y/R/B/O |
NT_034766 | AC026740 | 635219 | 1 |   |   | AC113428 | 541323 | | 18892 | 0 | 75505 | 94397 |
S/G/Y/R/B/O |
NT_034766 | AC010427 | 818693 | 1 | chr5 | NT_034766 | AC122719 | 866058 | 1 | 7318 | 4903 | 4225 | 16446 |
S/G/Y/R/B/O |
NT_034766 | AC122719 | 866058 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_034766 | AC122719 | 866058 | 1 |   |   | AC016498 | 818693 | | 81138 | 1534 | 66312 | 148984 |
S/G/Y/R/B/O |
NT_034766 | AC122719 | 866058 | 1 |   |   | AP001130 | 1071340 | | 53896 | 5562 | 41634 | 101092 |
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