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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037658 | AC008459 | 68171037 | 2 | chr5 | NT_037658 | AC079467 | 68262774 | 3 | 44359 | 0 | 0 | 44359 |
S/G/Y/R/B/O |
NT_037658 | AC008459 | 68171037 | 2 |   |   | AC010459 | 67983739 | | 72023 | 4340 | 11411 | 87774 |
S/G/Y/R/B/O |
NT_037658 | AC008459 | 68171037 | 2 |   |   | AC024422 | 67983739 | | 90195 | 4294 | 0 | 94489 |
S/G/Y/R/B/O |
NT_037658 | AC008459 | 68171037 | 2 |   |   | AC110010 | 68262774 | | 93784 | 0 | 0 | 93784 |
S/G/Y/R/B/O |
NT_037658 | AC008459 | 68171037 | 2 |   |   | AL355364 | 68262774 | | 23742 | 14208 | 16235 | 54185 |
S/G/Y/R/B/O |
NT_037658 | AC079467 | 68262774 | 3 | chr5 | NT_037658 | AC112206 | 68376511 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037658 | AC079467 | 68262774 | 3 |   |   | AC024422 | 68171037 | | 82212 | 6015 | 0 | 88227 |
S/G/Y/R/B/O |
NT_037658 | AC079467 | 68262774 | 3 |   |   | AC110010 | 68171037 | | 124579 | 0 | 0 | 124579 |
S/G/Y/R/B/O |
NT_037658 | AC079467 | 68262774 | 3 |   |   | AL355364 | 68171037 | | 12827 | 4371 | 7835 | 25033 |
S/G/Y/R/B/O |
NT_037658 | AC112206 | 68376511 | 3 | chr5 | NT_037658 | AC106798 | 68561801 | 3 | 0 | 0 | 72212 | 72212 |
S/G/Y/R/B/O |
NT_037658 | AC112206 | 68376511 | 3 |   |   | AC024422 | 68171037 | | 10718 | 3809 | 0 | 14527 |
S/G/Y/R/B/O |
NT_037658 | AC112206 | 68376511 | 3 |   |   | AC110010 | 68561801 | | 10842 | 0 | 0 | 10842 |
S/G/Y/R/B/O |
NT_037658 | AC106798 | 68561801 | 3 | chr5 | NT_037658 | AC024581 | 68646299 | 3 | 15987 | 0 | 0 | 15987 |
S/G/Y/R/B/O |
NT_037658 | AC106798 | 68561801 | 3 |   |   | AC091835 | 68646299 | | 22506 | 0 | 0 | 22506 |
S/G/Y/R/B/O |
NT_037658 | AC024581 | 68646299 | 3 | chr5 | NT_037658 | AC010376 | 68809198 | 3 | 2584 | 0 | 0 | 2584 |
S/G/Y/R/B/O |
NT_037658 | AC024581 | 68646299 | 3 |   |   | AC091835 | 68809198 | | 77210 | 0 | 0 | 77210 |
S/G/Y/R/B/O |
NT_037658 | AC010376 | 68809198 | 3 | chr5 | NT_037658 | AC104120 | 68951501 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037658 | AC010376 | 68809198 | 3 |   |   | AC012316 | 68561801 | | 77840 | 7043 | 3612 | 88495 |
S/G/Y/R/B/O |
NT_037658 | AC010376 | 68809198 | 3 |   |   | AC019283 | 68561801 | | 63095 | 2577 | 12362 | 78034 |
S/G/Y/R/B/O |
NT_037658 | AC010376 | 68809198 | 3 |   |   | AC106773 | 68646299 | | 57239 | 0 | 52827 | 110066 |
S/G/Y/R/B/O |
NT_037658 | AC104120 | 68951501 | 3 | chr5 | NT_037658 | AC016564 | 69068321 | 3 | 24988 | 0 | 0 | 24988 |
S/G/Y/R/B/O |
NT_037658 | AC104120 | 68951501 | 3 |   |   | AC008414 | 68646299 | | 11429 | 0 | 0 | 11429 |
S/G/Y/R/B/O |
NT_037658 | AC104120 | 68951501 | 3 |   |   | AC012316 | 68646299 | | 12862 | 2381 | 0 | 15243 |
S/G/Y/R/B/O |
NT_037658 | AC104120 | 68951501 | 3 |   |   | AC019283 | 69068321 | | 55391 | 2933 | 4125 | 62449 |
S/G/Y/R/B/O |
NT_037658 | AC016564 | 69068321 | 3 | chr5 | NT_037658 | AC024579 | 69156516 | 3 | 19335 | 0 | 0 | 19335 |
S/G/Y/R/B/O |
NT_037658 | AC016564 | 69068321 | 3 |   |   | AC008414 | 69068321 | | 117988 | 0 | 0 | 117988 |
S/G/Y/R/B/O |
NT_037658 | AC024579 | 69156516 | 3 | chr5 | NT_037658 | AC010280 | 69306386 | 3 | 36202 | 0 | 0 | 36202 |
S/G/Y/R/B/O |
NT_037658 | AC024579 | 69156516 | 3 |   |   | AC008414 | 68951501 | | 73021 | 0 | 0 | 73021 |
S/G/Y/R/B/O |
NT_037658 | AC024579 | 69156516 | 3 |   |   | AC017093 | 69068321 | | 37498 | 0 | 0 | 37498 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 | chr5 | NT_037658 | AC020941 | 69403940 | 3 | 16671 | 0 | 0 | 16671 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 |   |   | AC008816 | 69068321 | | 72713 | 0 | 0 | 72713 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 |   |   | AC010242 | 69068321 | | 72713 | 0 | 0 | 72713 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 |   |   | AC017093 | 69068321 | | 133718 | 0 | 0 | 133718 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 |   |   | AC026420 | 69156516 | | 66030 | 0 | 0 | 66030 |
S/G/Y/R/B/O |
NT_037658 | AC010280 | 69306386 | 3 |   |   | AC094084 | 69156516 | | 10809 | 2690 | 1992 | 15491 |
S/G/Y/R/B/O |
NT_037658 | AC020941 | 69403940 | 3 | chr5 | NT_037658 | AC024567 | 69558578 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037658 | AC020941 | 69403940 | 3 |   |   | AC008816 | 69156516 | | 118206 | 0 | 0 | 118206 |
S/G/Y/R/B/O |
NT_037658 | AC020941 | 69403940 | 3 |   |   | AC010242 | 69156516 | | 118206 | 0 | 0 | 118206 |
S/G/Y/R/B/O |
NT_037658 | AC020941 | 69403940 | 3 |   |   | AC026420 | 69306386 | | 10750 | 0 | 3259 | 14009 |
S/G/Y/R/B/O |
NT_037658 | AC020941 | 69403940 | 3 |   |   | AC094084 | 69306386 | | 22809 | 0 | 871 | 23680 |
S/G/Y/R/B/O |
NT_037658 | AC024567 | 69558578 | 3 | chr5 | NT_037658 | AC010236 | 69645612 | 3 | 73018 | 0 | 0 | 73018 |
S/G/Y/R/B/O |
NT_037658 | AC024567 | 69558578 | 3 |   |   | AC022136 | 69645612 | | 12248 | 4870 | 9825 | 26943 |
S/G/Y/R/B/O |
NT_037658 | AC010236 | 69645612 | 3 | chr5 | NT_037658 | AC093523 | 69693961 | 3 | 37417 | 0 | 0 | 37417 |
S/G/Y/R/B/O |
NT_037658 | AC010236 | 69645612 | 3 |   |   | AC010499 | 69645612 | | 42690 | 0 | 0 | 42690 |
S/G/Y/R/B/O |
NT_037658 | AC093523 | 69693961 | 3 | chr5 | NT_037658 | AC093248 | 69813151 | 1 | 24124 | 11691 | 9985 | 45800 |
S/G/Y/R/B/O |
NT_037658 | AC093523 | 69693961 | 3 |   |   | AC093226 | 69645612 | | 67096 | 4887 | 26784 | 98767 |
S/G/Y/R/B/O |
NT_037658 | AC093248 | 69813151 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037658 | AC093248 | 69813151 | 1 |   |   | AC093226 | 69894231 | | 26713 | 10466 | 16586 | 53765 |
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