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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 | chr5 | NT_037667 | AC113388 | 178393843 | 3 | 28580 | 0 | 0 | 28580 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 | chr5 | NT_037667 | AC091821 | 178409007 | 3 | 24720 | 0 | 0 | 24720 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 |   |   | AC136606 | 178216572 | | 86485 | 1689 | 0 | 88174 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 |   |   | AC136607 | 178216572 | | 10083 | 0 | 0 | 10083 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 |   |   | AC136626 | 178216572 | | 36936 | 0 | 1975 | 38911 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 |   |   | AC136627 | 178216572 | | 33382 | 0 | 0 | 33382 |
S/G/Y/R/B/O |
NT_037667 | AC118457 | 178307158 | 3 |   |   | AC136632 | 178216572 | | 50323 | 0 | 20068 | 70391 |
S/G/Y/R/B/O |
NT_037667 | AC113388 | 178393843 | 3 | chr5 | NT_037667 | AC091821 | 178409007 | 3 | 39837 | 0 | 0 | 39837 |
S/G/Y/R/B/O |
NT_037667 | AC113388 | 178393843 | 3 |   |   | AC136592 | 178307158 | | 13668 | 0 | 0 | 13668 |
S/G/Y/R/B/O |
NT_037667 | AC113388 | 178393843 | 3 |   |   | AC136606 | 178307158 | | 43703 | 0 | 0 | 43703 |
S/G/Y/R/B/O |
NT_037667 | AC113388 | 178393843 | 3 |   |   | AC136626 | 178307158 | | 34285 | 0 | 2028 | 36313 |
S/G/Y/R/B/O |
NT_037667 | AC113388 | 178393843 | 3 |   |   | AC136627 | 178307158 | | 31860 | 0 | 11840 | 43700 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 | chr5 | NT_037667 | AC010299 | 178510846 | 3 | 10135 | 0 | 0 | 10135 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 | chr5 | NT_037667 | AC118457 | 178307158 | 3 | 24720 | 0 | 0 | 24720 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136592 | 178307158 | | 52158 | 0 | 0 | 52158 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136606 | 178307158 | | 66305 | 0 | 0 | 66305 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136609 | 178307158 | | 14073 | 0 | 0 | 14073 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136626 | 178307158 | | 119417 | 0 | 13537 | 132954 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136627 | 178307158 | | 83181 | 0 | 31784 | 114965 |
S/G/Y/R/B/O |
NT_037667 | AC091821 | 178409007 | 3 |   |   | AC136632 | 178307158 | | 17888 | 0 | 111404 | 129292 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 | chr5 | NT_037667 | AC093290 | 178608361 | 3 | 62327 | 0 | 0 | 62327 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC093293 | 178608361 | | 37672 | 0 | 1824 | 39496 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136592 | 178608361 | | 87041 | 0 | 0 | 87041 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136601 | 178608361 | | 63183 | 1877 | 15810 | 80870 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136605 | 178608361 | | 81150 | 0 | 0 | 81150 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136609 | 178608361 | | 47954 | 0 | 58623 | 106577 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136626 | 178608361 | | 35345 | 0 | 0 | 35345 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136627 | 178608361 | | 17100 | 0 | 21097 | 38197 |
S/G/Y/R/B/O |
NT_037667 | AC010299 | 178510846 | 3 |   |   | AC136632 | 178608361 | | 17281 | 0 | 15907 | 33188 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 | chr5 | NT_037667 | AC008659 | 178676623 | 3 | 48524 | 0 | 0 | 48524 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC093293 | 178510846 | | 65907 | 0 | 50174 | 116081 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC093293 | 178510846 | | 65907 | 0 | 50174 | 116081 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136592 | 178510846 | | 42135 | 0 | 0 | 42135 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136592 | 178510846 | | 42135 | 0 | 0 | 42135 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136601 | 178510846 | | 101936 | 4768 | 26530 | 133234 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136601 | 178510846 | | 101936 | 4768 | 26530 | 133234 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136605 | 178510846 | | 137871 | 3789 | 1632 | 143292 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136605 | 178510846 | | 137871 | 3789 | 1632 | 143292 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136609 | 178510846 | | 129097 | 0 | 39054 | 168151 |
S/G/Y/R/B/O |
NT_037667 | AC093290 | 178608361 | 3 |   |   | AC136609 | 178510846 | | 129097 | 0 | 39054 | 168151 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 | chr5 | NT_037667 | AC022096 | 178835286 | 3 | 26282 | 0 | 0 | 26282 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC026097 | 178835286 | | 59671 | 3869 | 20538 | 84078 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC026097 | 178835286 | | 59671 | 3869 | 20538 | 84078 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC061981 | 178835286 | | 67949 | 3863 | 18990 | 90802 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC061981 | 178835286 | | 67949 | 3863 | 18990 | 90802 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC093293 | 178608361 | | 48522 | 0 | 0 | 48522 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC093293 | 178608361 | | 48522 | 0 | 0 | 48522 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC136605 | 178608361 | | 17204 | 683 | 0 | 17887 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC136605 | 178608361 | | 17204 | 683 | 0 | 17887 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC136609 | 178608361 | | 39996 | 0 | 0 | 39996 |
S/G/Y/R/B/O |
NT_037667 | AC008659 | 178676623 | 3 |   |   | AC136609 | 178608361 | | 39996 | 0 | 0 | 39996 |
S/G/Y/R/B/O |
NT_037667 | AC022096 | 178835286 | 3 | chr5 | NT_037667 | AC113348 | 179023598 | 3 | 21709 | 0 | 0 | 21709 |
S/G/Y/R/B/O |
NT_037667 | AC022096 | 178835286 | 3 |   |   | AC026097 | 178676623 | | 65802 | 5879 | 10248 | 81929 |
S/G/Y/R/B/O |
NT_037667 | AC022096 | 178835286 | 3 |   |   | AC061981 | 178676623 | | 62266 | 1958 | 326 | 64550 |
S/G/Y/R/B/O |
NT_037667 | AC113348 | 179023598 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037667 | AC113348 | 179023598 | 3 | chr5 | NT_006519 | AC126915 | 179091607 | 3 | 11859 | 0 | 0 | 11859 |
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