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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004391
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004391AL590609237232722RH68027182.39    1 AL590609.14, AL590728.21
S/G/Y/R/B/O NT_004391AL590609237261802RH11467182.39    1 AL590609.14, AL590728.21
S/G/Y/R/B/O NT_004391AL590609238137842RH672761397.38    2 AL590609.14
S/G/Y/R/B/O NT_004391AL590609238151512RH115641397.43    1 AL590609.14
S/G/Y/R/B/O NT_004391AL590609238184282RH200192067.70    2 AC090439.8, AL590609.14
S/G/Y/R/B/O NT_004391AL590609238185402RH1351  11372.00  2 AC090439.8, AL590609.14
S/G/Y/R/B/O NT_004391AL590609238185952RH26834183.60    2 AC090439.8, AL590609.14
S/G/Y/R/B/O NT_004391AL590609238375022RH11123182.39    1 AL590609.14, AL590728.21
S/G/Y/R/B/O NT_004391AL591178239068903RH75142182.39    1 AL591178.12
S/G/Y/R/B/O NT_004391AL590683240108963RH102903182.80    1 AL590683.16
S/G/Y/R/B/O NT_004391AL358412241508763          
S/G/Y/R/B/O NT_004391AL138902241583383          
S/G/Y/R/B/O NT_004391AL031431242077893RH69529182.90    1 AL031431.8
S/G/Y/R/B/O NT_004391AL031431242467573RH69363182.39    1 AL031431.8
S/G/Y/R/B/O NT_004391AL031431242696613RH69442185.62    1 AC093587.2, AL031431.8
S/G/Y/R/B/O NT_004391AL031431242700883RH27104182.90    1 AC093587.2, AL031431.8
S/G/Y/R/B/O NT_004391AL031431243204663RH64210182.90    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243204663SGC30617    182.601 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243218533RH70727183.60    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243228143RH12334182.90    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243233513RH18352183.60    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243233553RH50875183.60  184.201 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243234473RH64781183.60    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL031431243235623RH64750183.60    1 AC093587.2, AL031431.8, AL353145.4
S/G/Y/R/B/O NT_004391AL034582243742413RH49301183.60    1 AL034582.11
S/G/Y/R/B/O NT_004391AL034582243742413RH30660  11346.00  1 AL034582.11
S/G/Y/R/B/O NT_004391AL034582243914423RH26977183.60    1 AL034582.11, AL353145.4
S/G/Y/R/B/O NT_004391AL445686243974563          
S/G/Y/R/B/O NT_004391AL445648245052241          
S/G/Y/R/B/O NT_004391AL662924246030451RH48347185.21    1 AL445648.17, AL662924.17
S/G/Y/R/B/O NT_004391AL662924246904311RH65742181.89    1 AC017067.4, AL356116.6
S/G/Y/R/B/O NT_004391AL662924246924281RH68926183.60    1 AC010777.1, AL662924.17
S/G/Y/R/B/O NT_004391AL662924246944491RH50104183.60  184.201 AL662924.17
S/G/Y/R/B/O NT_004391AL662924246944491RH32156  11501.00  1 AL662924.17
S/G/Y/R/B/O NT_004391AL023096247492283RH50064183.60  184.201 AL023096.1
S/G/Y/R/B/O NT_004391AL023096247494263RH70984182.39    1 AL023096.1
S/G/Y/R/B/O NT_004391AL445471248098513          
S/G/Y/R/B/O NT_004391AL050344248966923RH99265185.52    1 AC027704.3, AL050344.31
S/G/Y/R/B/O NT_004391AL050344249239503CHLC.GGAA22F10    184.201 AC027704.3, AL050344.31
S/G/Y/R/B/O NT_004391AL121994249474653          
S/G/Y/R/B/O NT_004391AL031432250719973RH68497182.39    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432250725383RH50317185.52  185.601 AL031432.1
S/G/Y/R/B/O NT_004391AL031432250729553RH11532185.31    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432250919133RH12483185.31    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432250937293RH70766185.62    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432250945223RH68822182.39    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432251058233RH27201185.45    1 AL031432.1
S/G/Y/R/B/O NT_004391AL031432251063333RH75456185.42    1 AL031432.1
S/G/Y/R/B/O NT_004391 - RH17541185.11    0  
S/G/Y/R/B/O NT_004391 - RH33023  11436.00  1 AC068311.3, AL031428.9, AL831787.1


  NT_004391 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004391 - RH50197183.60    0 AL590728.21
S/G/Y/R/B/O NT_004391 - RH68284185.21    1 AL031727.43, AP003160.1
S/G/Y/R/B/O NT_004391 - RH93555183.60    0  
S/G/Y/R/B/O NT_004391 - RH98397185.31    1 AC068311.3, AL031428.9