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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_026943
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_026943AL691465840874973          
S/G/Y/R/B/O NT_026943AC116099841368031          
S/G/Y/R/B/O NT_026943AL360000843209163          
S/G/Y/R/B/O NT_026943AC098654844850611RH660241233.33    1 AC098654.1, AC103595.1
S/G/Y/R/B/O NT_026943AC103595844835311          
S/G/Y/R/B/O NT_026943AL035706846298733RH638121234.56  1234.701 AL035706.10
S/G/Y/R/B/O NT_026943AL035706846986293RH504711236.58  1236.701 AL035706.10
S/G/Y/R/B/O NT_026943AL035706847257003RH265381234.66    1 AL035706.10
S/G/Y/R/B/O NT_026943AL138844847286343RH933821234.87    1 AL138844.24
S/G/Y/R/B/O NT_026943AC104454847867253          
S/G/Y/R/B/O NT_026943AL359504849373823RH804051232.80    1 AC025340.2, AL359504.29
S/G/Y/R/B/O NT_026943AL359504849811453RH507861236.58  1238.001 AC025340.2, AC069041.2, AL359504.29, AL450308.2
S/G/Y/R/B/O NT_026943AL450063850108033RH647311236.58    1 AC025340.2, AC069041.2, AL450063.14, AL450308.2
S/G/Y/R/B/O NT_026943AL450063850941323RH496301236.58  1238.001 AC027046.2, AC069041.2, AL450063.14
S/G/Y/R/B/O NT_026943AL450063850942953RH691271238.39    1 AC027046.2, AL450063.14
S/G/Y/R/B/O NT_026943AL450063850968813RH498191238.2014084.001235.801 AC027046.2, AC069041.2, AL450063.14
S/G/Y/R/B/O NT_026943AL450063850981703RH642081236.5814084.001236.501 AC027046.2, AC069041.2, AL450063.14
S/G/Y/R/B/O NT_026943AL359273852115633RH481281236.58    1 AC025374.2, AL136113.6, AL359273.11
S/G/Y/R/B/O NT_026943AL359273852289383RH492551236.58    1 AC025374.2, AL136113.6, AL359273.11
S/G/Y/R/B/O NT_026943AC027606853217781          
S/G/Y/R/B/O NT_026943AC114482853390371          
S/G/Y/R/B/O NT_026943AL359762854447541RH480051236.58    1 AC009265.10, AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762854450661RH643361236.68  1237.901 AC009265.10, AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762854458111RH127651236.58    1 AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762854460811RH74515  14137.00  1 AC009265.10, AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762854465211RH108521236.58    1 AC009265.10, AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762854470231RH506331236.58  1238.001 AC009265.10, AC114482.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855362761RH498711236.5814071.001236.701 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855364461RH177601238.51    1 AC009265.10, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855372371RH707251236.58    1 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855372861RH498651236.58  1238.001 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855378071RH257621236.58    1 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855378401RH638011236.58  1235.801 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855415631RH645431236.58    1 AC009265.10, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855935621RH501201236.58  1238.001 AC027606.4, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AL359762855935621RH682981238.69    1 AC027606.4, AC068008.2, AL359762.22
S/G/Y/R/B/O NT_026943AC104169856726711RH923631238.41    1 AC104169.2
S/G/Y/R/B/O NT_026943AL139150857867303RH1033241238.71    1 AL139150.12
S/G/Y/R/B/O NT_026943AL358789858791343RH462551239.31    1 AC013291.4, AL358789.22
S/G/Y/R/B/O NT_026943AL358789859939283RH983901238.41    1 AC021172.3, AL358789.22, AL359271.7
S/G/Y/R/B/O NT_026943AL603750860135423RH639001239.94  1242.001 AC021172.3, AL359271.7, AL603750.7
S/G/Y/R/B/O NT_026943AL603750860367103RH642371240.42  1242.201 AC021172.3, AL359271.7, AL603750.7
S/G/Y/R/B/O NT_026943 - RH118791236.58    0  
S/G/Y/R/B/O NT_026943 - RH365211236.58    1 AC022200.6, AC073328.1, AC091052.1, AP001207.3
S/G/Y/R/B/O NT_026943 - RH642381234.5614099.001236.000  
S/G/Y/R/B/O NT_026943 - RH29956  14128.00  1 AL136986.4, AL157944.24