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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004686
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004686AL691464903189913RH266611247.24    1 AL691464.4
S/G/Y/R/B/O NT_004686AL691464903213323RH931751248.65    2 AL139416.4, AL160008.3, AL691464.4
S/G/Y/R/B/O NT_004686AL596214903318753          
S/G/Y/R/B/O NT_004686AC099569904898233WI-6782    1252.801 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904898233RH503031247.24    1 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904898703RH108841247.44    1 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904898753RH105391247.44    1 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904910893RH254371247.44    1 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904910903WI-15594    1252.801 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569904910903RH508441247.44    1 AC021385.4, AC099569.2
S/G/Y/R/B/O NT_004686AC099569905009483WI-11038    1261.601 AC093423.2, AC099569.2
S/G/Y/R/B/O NT_004686AC099569905009483RH507191242.43    1 AC093423.2, AC099569.2
S/G/Y/R/B/O NT_004686AC093423906010783AFMA205XD5    1252.801 AC093423.2
S/G/Y/R/B/O NT_004686AC093423906082773RH1029571248.84    1 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC093423906101713RH654671248.84    1 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC093423906125963RH992761248.84    1 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC093423906142873RH644501250.27  1252.801 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC093423906300893RH503841253.21  1252.901 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC093423906300893RH457851253.21    1 AC093423.2, AC099568.2
S/G/Y/R/B/O NT_004686AC099568906768423          
S/G/Y/R/B/O NT_004686AL391497908291233RH695531250.79    1 AC079091.3, AL391497.9, AL512367.6
S/G/Y/R/B/O NT_004686AL161797909217993RH483271252.13    1 AC079091.3, AL161797.10, AL512367.6
S/G/Y/R/B/O NT_004686AL161797909230743RH695791251.39    1 AL161797.10
S/G/Y/R/B/O NT_004686AL161797909267103RH684411250.27    1 AC079091.3, AL161797.10, AL512367.6
S/G/Y/R/B/O NT_004686AL161797909269673RH751211252.13    1 AC079091.3, AL161797.10, AL512367.6
S/G/Y/R/B/O NT_004686AL161797909287463RH474201252.13    1 AC079091.3, AL161797.10, AL512367.6
S/G/Y/R/B/O NT_004686AL450462910059371          
S/G/Y/R/B/O NT_004686AC098656912468303RH500051253.75  1254.701 AC098656.2
S/G/Y/R/B/O NT_004686AL627316912497331          
S/G/Y/R/B/O NT_004686AC092783913790313          
S/G/Y/R/B/O NT_004686AC092019914907943          
S/G/Y/R/B/O NT_004686AC124917915315611          
S/G/Y/R/B/O NT_004686AC092805917352703RH942071255.90    1 AC016319.2, AC084151.2, AC092805.2, AL355867.8
S/G/Y/R/B/O NT_004686AL590094917524173          
S/G/Y/R/B/O NT_004686AC091614917882733RH786501255.90    1 AC022219.3, AC084151.2, AC091614.3
S/G/Y/R/B/O NT_004686AC091614918673703RH470981255.15    1 AC022219.3, AC023147.3, AC091614.3, AL136109.11
S/G/Y/R/B/O NT_004686AC091614918674053RH673071254.34    1 AC022219.3, AC023147.3, AC091614.3, AL136109.11
S/G/Y/R/B/O NT_004686AL136109918917103RH481061255.09    1 AC022219.3, AC023147.3, AL136109.11
S/G/Y/R/B/O NT_004686AL136109918926633RH1036081254.02    1 AC022219.3, AC023147.3, AL136109.11
S/G/Y/R/B/O NT_004686AL136109918930603RH992471255.90    1 AC022219.3, AC023147.3, AL136109.11
S/G/Y/R/B/O NT_004686AL136109919630683RH477431255.15    1 AC022219.3, AC023147.3, AC027738.3, AC119679.1, AL136109.11
S/G/Y/R/B/O NT_004686AL136109919729613RH642861255.0914420.001261.801 AC023147.3, AC119679.1, AL136109.11
S/G/Y/R/B/O NT_004686AC119679919917301          
S/G/Y/R/B/O NT_004686AC019187920453373RH422731255.90    1 AC093563.2, AC119679.1, AL049743.10
S/G/Y/R/B/O NT_004686AC019187920453373RH405  14414.00  1 AC093563.2, AC119679.1, AL049743.10
S/G/Y/R/B/O NT_004686AC093563921836123          
S/G/Y/R/B/O NT_004686AC098690922129853RH924971255.79    1 AC013557.3, AC073301.2, AC098690.2, AL356236.4
S/G/Y/R/B/O NT_004686 - RH455471253.96    0  
S/G/Y/R/B/O NT_004686 - TIGR-A004S46    1259.101 AL121573.15, AL139416.4, AL683813.10
S/G/Y/R/B/O NT_004686 - RH661231255.90    0 AC013557.3, AC073301.2


  NT_004686 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004686 - TIGR-A002M34    1261.001 AL359825.2, AL445991.15
S/G/Y/R/B/O NT_004686 - RH690431253.21    0