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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004538
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004538AL360012288617551RH67949171.55    2 AL360012.17, AL513497.20, AL714002.13, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288617611SGC30964    192.301 AL360012.17, AL513497.20, AL714002.13, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288617611RH50749190.53    1 AL360012.17, AL513497.20, AL714002.13, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288836531RH77841190.53    1 AL360012.17, AL513497.20, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288838441RH36555194.68    1 AL360012.17, AL513497.20, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288875511TIGR-A003P24    192.301 AL360012.17, AL513497.20, AL714002.13, AL714002.13
S/G/Y/R/B/O NT_004538AL360012288875511RH64460190.53    1 AL360012.17, AL513497.20, AL714002.13, AL714002.13
S/G/Y/R/B/O NT_004538AL360012289261091RH103048195.57    1 AL360012.17, AL513497.20, AL714002.13
S/G/Y/R/B/O NT_004538AL360012289543561RH68391195.57    1 AL360012.17, AL513497.20
S/G/Y/R/B/O NT_004538AL360012289543741SGC32496    194.501 AL360012.17, AL513497.20
S/G/Y/R/B/O NT_004538AL360012289543741RH32432  11780.00  1 AL360012.17, AL513497.20
S/G/Y/R/B/O NT_004538AL360012289556891RH67527195.57    1 AL360012.17, AL513497.20
S/G/Y/R/B/O NT_004538AL360012289573471RH63774195.40    1 AL360012.17, AL513497.20
S/G/Y/R/B/O NT_004538AL360012289675611RH75107194.63    1 AL360012.17
S/G/Y/R/B/O NT_004538AL714002288053371          
S/G/Y/R/B/O NT_004538AL645729290345283RH64766195.57    1 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL645729290471613RH11730195.57    1 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL645729290507963RH27127190.53    1 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL645729290515703WI-12302    196.101 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL645729290515703RH63899193.17    1 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL645729290518243RH17235195.57    1 AC022766.3, AL645729.14
S/G/Y/R/B/O NT_004538AL356786291017953RH668501485.57    2 AC022766.3, AL356786.35
S/G/Y/R/B/O NT_004538AL009181292672933RH46409192.76    1 AC021602.2, AC023527.2, AL009181.1
S/G/Y/R/B/O NT_004538AL138785292912193          
S/G/Y/R/B/O NT_004538AL357500294496823RH68503195.57    1 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500294515723RH104511190.93    1 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500294524153RH98235192.76    1 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500294524273RH104523192.76    1 AL357500.17
S/G/Y/R/B/O NT_004538AL357500294805053WI-9232    194.501 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500294805053RH49602193.17    1 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500294807203RH17621192.76    1 AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500295010143RH50550195.57  196.701 AC004236.1, AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500295010143RH16613195.57    1 AC004236.1, AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL357500295050443RH67647194.37    1 AC004236.1, AC025145.2, AL354986.4, AL357500.17, AL513012.4
S/G/Y/R/B/O NT_004538AL590729295246763RH44244192.76    1 AC004236.1, AC025145.2, AL590729.14
S/G/Y/R/B/O NT_004538AL590729295264483RH36561195.57    1 AC004236.1, AC025145.2, AL513012.4, AL590729.14
S/G/Y/R/B/O NT_004538AL590729295264693RH76602194.68    1 AC004236.1, AC025145.2, AL513012.4, AL590729.14
S/G/Y/R/B/O NT_004538AL590729295435553RH104226192.97    1 AC025145.2, AL513012.4, AL590729.14
S/G/Y/R/B/O NT_004538AL645859295783943          
S/G/Y/R/B/O NT_004538AL049570296591913WI-6290    194.501 AL049570.11
S/G/Y/R/B/O NT_004538AL049570296591913RH63925193.17    1 AL049570.11
S/G/Y/R/B/O NT_004538AL049570296591953RH10716195.57    1 AL049570.11
S/G/Y/R/B/O NT_004538AL139151297789273WI-3870    198.901 AL139151.13, AL714008.7
S/G/Y/R/B/O NT_004538AL671862298134223          
S/G/Y/R/B/O NT_004538 - D1S449    192.901 AL021921.1, U95738.1
S/G/Y/R/B/O NT_004538 - WI-3615    192.900  
S/G/Y/R/B/O NT_004538 - D1S470    192.901 AC015478.4, AC092265.2
S/G/Y/R/B/O NT_004538 - WI-7250    194.500 AL109743.4, AL139224.8, AL627313.15
S/G/Y/R/B/O NT_004538 - SGC33625    197.301 AC004873.1, AC004873.3, AL356390.24