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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034383
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034383AC103592768604161          
S/G/Y/R/B/O NT_034383AC099769770032793RH274871192.48    1 AC099769.2, AC103592.1, AL139155.3
S/G/Y/R/B/O NT_034383AC099769770033263RH645281192.27    1 AC099769.2, AC103592.1, AL139155.3
S/G/Y/R/B/O NT_034383AC099769770298903RH664131192.38    1 AC098655.1, AC099769.2, AC103592.1
S/G/Y/R/B/O NT_034383AC098655770899711          
S/G/Y/R/B/O NT_034383AC105279770946263          
S/G/Y/R/B/O NT_034383AC099672772150053GCT15A01    1219.201 AC012109.2, AC026066.4, AC099672.2, AC104458.2
S/G/Y/R/B/O NT_034383AC099672772196893RH488551205.30    1 AC012109.2, AC026066.4, AC099672.2, AC104458.2, AL358775.4
S/G/Y/R/B/O NT_034383AC104458772697293          
S/G/Y/R/B/O NT_034383AC099060773284973          
S/G/Y/R/B/O NT_034383AC069315774581541          
S/G/Y/R/B/O NT_034383AC096951775263293RH453171207.51    1 AC069315.2, AC096951.2
S/G/Y/R/B/O NT_034383AC096951775846023AFM312VG5    1217.001 AC096951.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776564853RH183251205.09    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776565583RH646601194.48    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776572693RH646341191.86    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776579733RH500521207.51  1220.301 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776582263WI-21234    1220.401 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776582263RH497281212.53    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776819233RH810871196.09    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776833193RH646491191.86    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776845753RH697051205.09    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AL035409776850003RH748991229.56    1 AC026874.4, AC113935.2, AL035409.15
S/G/Y/R/B/O NT_034383AC113935777825243RH151161202.15    1 AC073027.2, AC093433.1, AC113935.2
S/G/Y/R/B/O NT_034383AC093433779088981WI-3101    1219.201 AC019136.5, AC093433.1, AL500523.2
S/G/Y/R/B/O NT_034383AC019136778496191          
S/G/Y/R/B/O NT_034383AC095030779277723RH1010  13765.00  1 AC019136.5, AC095030.2, AL500523.2
S/G/Y/R/B/O NT_034383AC095030779657353RH644071192.38    1 AC019136.5, AC095030.2, AL500523.2
S/G/Y/R/B/O NT_034383AC095030779657353WI-17969    1217.301 AC019136.5, AC095030.2, AL500523.2
S/G/Y/R/B/O NT_034383AC095030779956633WI-4060    1222.501 AC019136.5, AC026073.4, AC095030.2
S/G/Y/R/B/O NT_034383AC093575781378373RH254871191.86    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781391663RH102291208.98    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781629913RH32087  13782.001220.301 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781629913RH643561229.87    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781633353RH1038031192.27    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781658163RH162781209.08    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781660363RH676321209.08    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781668853RH271741191.36    1 AC093575.2
S/G/Y/R/B/O NT_034383AC093575781794833RH254751192.38    1 AC093575.2
S/G/Y/R/B/O NT_034383AC118549782313093RH917591209.08    1 AC118549.2
S/G/Y/R/B/O NT_034383AC118549782320483RH672941209.19    1 AC118549.2
S/G/Y/R/B/O NT_034383 - RH645601193.94    1 AC096948.2, AC103591.2
S/G/Y/R/B/O NT_034383 - RH1025131192.48    1 AC096948.2, AC103591.2
S/G/Y/R/B/O NT_034383 - RH1026301197.22    1 AC015897.3, AC019284.4, AC058795.3
S/G/Y/R/B/O NT_034383 - RH1035001191.96    1 AC024326.2, AC099674.2
S/G/Y/R/B/O NT_034383 - RH158191192.38    1 AC104837.2, AL672168.4
S/G/Y/R/B/O NT_034383 - RH171651205.30    1 AC009337.4, AL357314.11, AL592082.4
S/G/Y/R/B/O NT_034383 - RH176681205.30    1 AL357314.11, AL359206.3, AL592082.4
S/G/Y/R/B/O NT_034383 - RH483441192.07    1 AC104837.2, AL672168.4
S/G/Y/R/B/O NT_034383 - RH487011192.17    1 AC096948.2, AL390880.5


  NT_034383 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034383 - RH642121193.67    1 AL136324.6, AL672168.4
S/G/Y/R/B/O NT_034383 - RH646701193.94    1 AC096948.2, AC103591.2
S/G/Y/R/B/O NT_034383 - RH662181193.67    1 AC025209.4, AC093118.2, AC103591.2
S/G/Y/R/B/O NT_034383 - RH672921197.43    1 AC027384.2, AC073499.2, AC118550.2
S/G/Y/R/B/O NT_034383 - RH680521197.43    1 AC009418.2
S/G/Y/R/B/O NT_034383 - RH690101197.22    1 AC009418.2
S/G/Y/R/B/O NT_034383 - RH788681193.94    1 AC114487.2
S/G/Y/R/B/O NT_034383 - RH802181197.22    0 AC026874.4, AC113935.2, AL035409.15