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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034379
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034379AC092265299149973D1S470    192.901 AC015478.4, AC092265.2
S/G/Y/R/B/O NT_034379AL645944300126591          
S/G/Y/R/B/O NT_034379AL662906302269053D1S493    1131.901 AC027064.2
S/G/Y/R/B/O NT_034379AL137076303359333          
S/G/Y/R/B/O NT_034379AL109740304231923          
S/G/Y/R/B/O NT_034379AL021921305139973RH2249192.86    1 AL021921.1, U95738.1
S/G/Y/R/B/O NT_034379AL021921305139973D1S449    192.901 AL021921.1, U95738.1
S/G/Y/R/B/O NT_034379AL021921305139973RH29946  11654.00  1 AL021921.1, U95738.1
S/G/Y/R/B/O NT_034379AL161638306698203RH42306196.40    1 AL161638.10
S/G/Y/R/B/O NT_034379AL161638306699223RH882  11645.00  1 AL161638.10
S/G/Y/R/B/O NT_034379AL591901307236903          
S/G/Y/R/B/O NT_034379AL137857309783643RH49771198.53  1101.901 AC078821.30, AL137857.29
S/G/Y/R/B/O NT_034379AL137857309804713RH76222196.02    1 AC078821.30, AL137857.29
S/G/Y/R/B/O NT_034379AL137857309998363RH25313196.82    1 AC078821.30, AL137027.17, AL137857.29, AL591412.2
S/G/Y/R/B/O NT_034379AL137857310002573RH13999  11649.00  1 AC078821.30, AL137027.17, AL137857.29, AL591412.2
S/G/Y/R/B/O NT_034379AL137027310015763          
S/G/Y/R/B/O NT_034379AL445235311259701RH49189198.53    1 AL445235.29, AL591412.2
S/G/Y/R/B/O NT_034379AL445235311367671RH102992198.53    1 AL365174.3, AL445235.29
S/G/Y/R/B/O NT_034379AL445235311372971RH12219198.53    1 AL365174.3, AL445235.29
S/G/Y/R/B/O NT_034379AL445235311994681RH25326198.53    1 AL445235.29
S/G/Y/R/B/O NT_034379AL445235311999301RH68367194.73    1 AL445235.29
S/G/Y/R/B/O NT_034379AL445235311999341RH11838198.53    1 AL445235.29
S/G/Y/R/B/O NT_034379AL445235312070521RH46050198.43    1 AL365174.3, AL445235.29
S/G/Y/R/B/O NT_034379AL356320312782163RH35246  11700.00  1 AL356320.8, AL365174.3
S/G/Y/R/B/O NT_034379AC114495314625341RH103124198.53    1 AC114495.2
S/G/Y/R/B/O NT_034379AC114495315280261RH103029194.52    1 AC114495.2
S/G/Y/R/B/O NT_034379AC114495315280301RH64789198.53    1 AC114495.2
S/G/Y/R/B/O NT_034379AC114495315441461RH68434198.53    1 AC114495.2, AL451070.18
S/G/Y/R/B/O NT_034379AL451070316239483RH76136194.52    1 AL451070.18
S/G/Y/R/B/O NT_034379AC114494316890211RH69468198.43    1 AC114494.1
S/G/Y/R/B/O NT_034379AC114494317294931RH67342198.53    1 AC114494.1
S/G/Y/R/B/O NT_034379AC114494317295011RH803901101.69    1 AC114494.1
S/G/Y/R/B/O NT_034379AL592073318139553          
S/G/Y/R/B/O NT_034379 - RH50610196.40    1 AL356489.14
S/G/Y/R/B/O NT_034379 - RH14657  11649.00  1 AC104335.1
S/G/Y/R/B/O NT_034379 - RH98843195.61    0 AC022307.14, AL121991.40