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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034405
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034405AL3568521669813473RH1037751610.99    1 AL356852.11
S/G/Y/R/B/O NT_034405AL0210681669850823RH166721610.99    1 AL021068.2, AL356852.11
S/G/Y/R/B/O NT_034405AL0210681669861223RH264431617.25    1 AL021068.2
S/G/Y/R/B/O NT_034405AL0210681669861363RH639551612.7116507.001761.001 AC068046.3, AL021068.2
S/G/Y/R/B/O NT_034405AL0210681669934593RH921361612.71    1 AL021068.2
S/G/Y/R/B/O NT_034405AL0210681669941223RH654851610.99    1 AL021068.2
S/G/Y/R/B/O NT_034405AL0210681670583523RH1040111613.74    1 AL021068.2
S/G/Y/R/B/O NT_034405AL0210681670619993RH658991613.64    1 AL021068.2
S/G/Y/R/B/O NT_034405Z995721670870803RH638021613.74  1760.201 Z99572.1
S/G/Y/R/B/O NT_034405Z995721671100453RH507751613.7416482.001760.001 Z99572.1
S/G/Y/R/B/O NT_034405Z995721671101123RH677361610.96    1 Z99572.1
S/G/Y/R/B/O NT_034405Z995721671122893RH645131614.25    1 Z99572.1
S/G/Y/R/B/O NT_034405Z995721671400873RH707931613.64    1 Z99572.1
S/G/Y/R/B/O NT_034405Z995721671869443RH14321  16470.00  1 Z99572.1
S/G/Y/R/B/O NT_034405AL0221461672426653RH662531610.96    1 AL022146.1
S/G/Y/R/B/O NT_034405AL0219401672886603RH505101613.54  1760.201 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401672886713RH174521610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401672894893RH1044851612.71    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401672952883WI-11175    1760.001 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673024923RH110891610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673083723RH110881610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673206303RH499271612.61  1759.501 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673209323RH176881610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673610883RH921411610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673906293RH175511612.71    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0219401673906653RH676801610.96    1 AL021940.1
S/G/Y/R/B/O NT_034405AL0312971674509223WI-13788    1761.101 AL031297.4
S/G/Y/R/B/O NT_034405AL0312971674509223RH639601618.37    1 AL031297.4
S/G/Y/R/B/O NT_034405AL0312971674517743RH1035781612.71    1 AL031297.4
S/G/Y/R/B/O NT_034405AL0312971674566193RH461061611.78    1 AL031297.4
S/G/Y/R/B/O NT_034405AL4451911675140363          
S/G/Y/R/B/O NT_034405AL1217141675193263RH29902  16554.001763.701 AL121714.33
S/G/Y/R/B/O NT_034405AL1217141675193263RH710271619.47    1 AL121714.33
S/G/Y/R/B/O NT_034405AL1217141675193263RH29899  16545.00  1 AL121714.33
S/G/Y/R/B/O NT_034405AL1217141675193553TIGR-A002K17    1766.501 AL121714.33
S/G/Y/R/B/O NT_034405AL1217141675193553RH710231619.47    1 AL121714.33
S/G/Y/R/B/O NT_034405AL1217141675193763RH268501617.07    1 AL121714.33
S/G/Y/R/B/O NT_034405AL3564751676065903          
S/G/Y/R/B/O NT_034405AL1624281677126373          
S/G/Y/R/B/O NT_034405AL4452031677146313          
S/G/Y/R/B/O NT_034405AL3546991679456013RH29901  16538.00  1 AL354699.11
S/G/Y/R/B/O NT_034405AL3547321679665573          
S/G/Y/R/B/O NT_034405AL1623991681501673RH783051617.86    1 AL162399.12
S/G/Y/R/B/O NT_034405AL1623991681524583D1S452    1767.201 AC103730.1, AL162399.12
S/G/Y/R/B/O NT_034405AL0234951681934393          
S/G/Y/R/B/O NT_034405Z972001683189523RH912991618.07    1 Z97200.1
S/G/Y/R/B/O NT_034405Z972001683266223WI-14774    1767.001 Z97200.1
S/G/Y/R/B/O NT_034405Z972001683266223RH503281618.79    1 Z97200.1
S/G/Y/R/B/O NT_034405AL0312851684895983D1S210    1766.101 AL031285.1
S/G/Y/R/B/O NT_034405AL0312851684895983RH132601615.7516599.00  1 AL031285.1


  NT_034405 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034405AL0319651685041203          
S/G/Y/R/B/O NT_034405 - RH110841612.71    1 AL390882.12
S/G/Y/R/B/O NT_034405 - RH639561612.61  1760.300  
S/G/Y/R/B/O NT_034405 - RH506061618.07    1 AL031286.2, AL359177.3, AL359177.3
S/G/Y/R/B/O NT_034405 - RH663551618.07    1 Z99127.2