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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004671
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004671AL5963421897879913          
S/G/Y/R/B/O NT_004671AL5131751899463553RH926571650.15    1 AL513175.10
S/G/Y/R/B/O NT_004671AL3575661900588943RH492711646.97    1 AL357566.12
S/G/Y/R/B/O NT_004671AL3909571900941383          
S/G/Y/R/B/O NT_004671AL1369871902725633RH1037441650.15    1 AL136987.11
S/G/Y/R/B/O NT_004671AL1369871903387223RH8738  17508.00  1 AL136987.11
S/G/Y/R/B/O NT_004671AL1369871903391313RH644131650.15  1805.901 AL136987.11
S/G/Y/R/B/O NT_004671AL5961191903936553RH986341650.15    1 AL596119.5
S/G/Y/R/B/O NT_004671AL1364541904193163RH686421646.97    1 AL136454.6, AL357113.4
S/G/Y/R/B/O NT_004671AL0354071905709933RH498841650.15  1805.901 AL035407.15, AL357113.4, AL365316.3
S/G/Y/R/B/O NT_004671AL0354071905709963RH504621650.1517508.001805.901 AL035407.15, AL357113.4, AL365316.3
S/G/Y/R/B/O NT_004671AL0354071905710363RH1044841650.15    1 AL035407.15, AL357113.4, AL365316.3
S/G/Y/R/B/O NT_004671AL0354071905712773RH690111646.97    1 AL035407.15, AL357113.4, AL365316.3
S/G/Y/R/B/O NT_004671AL3593901907331553RH673321646.97    1 AL136370.4, AL358172.7, AL358172.7, AL359390.14
S/G/Y/R/B/O NT_004671AL1363701907455473AFMB330XE9    1805.901 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701907501913RH765501646.57    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701907717713RH638171646.97  1805.901 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701907739093RH919001646.97    1 AL136370.4
S/G/Y/R/B/O NT_004671AL1363701907748833RH502361646.97  1805.901 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908225253RH692261646.97    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908293053RH751101646.87    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908297023RH712331646.97    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908441723RH693041646.97    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908454283RH918121650.15    1 AL136370.4, AL358172.7
S/G/Y/R/B/O NT_004671AL1363701908570233RH507511648.5817508.001809.201 AL136370.4
S/G/Y/R/B/O NT_004671AL3908631909384443RH505161648.48  1805.901 AL390863.9
S/G/Y/R/B/O NT_004671AL3908631909701113RH670911648.48    1 AC091583.2, AL390863.9
S/G/Y/R/B/O NT_004671AL1391331910030633RH38213  17499.00  1 AL139133.8
S/G/Y/R/B/O NT_004671AL1391331910105053RH643161650.77  1805.901 AC091583.2, AL139133.8
S/G/Y/R/B/O NT_004671AL1391331910105733RH167041649.00    1 AC091583.2, AL139133.8
S/G/Y/R/B/O NT_004671AL1391331910125163RH361271650.77    1 AL139133.8
S/G/Y/R/B/O NT_004671AL3588571910196033          
S/G/Y/R/B/O NT_004671AL1387781911346613          
S/G/Y/R/B/O NT_004671AL1601731913005183          
S/G/Y/R/B/O NT_004671AL3577931913319253          
S/G/Y/R/B/O NT_004671AL1600011914755553          
S/G/Y/R/B/O NT_004671AL1578371915030793WI-10636    1805.901 AL157837.10
S/G/Y/R/B/O NT_004671AL1580811916388023          
S/G/Y/R/B/O NT_004671AL1364561918562103D1S412    1807.101 AC015578.4, AL136456.13, AL356272.14
S/G/Y/R/B/O NT_004671AL1364561918562243RH134551650.2517538.00  1 AC015578.4, AL136456.13, AL356272.14
S/G/Y/R/B/O NT_004671AL3562721918572713          
S/G/Y/R/B/O NT_004671AL5911711919484503          
S/G/Y/R/B/O NT_004671AL1392141919597093          
S/G/Y/R/B/O NT_004671AL5133481921002643          
S/G/Y/R/B/O NT_004671AL5132261922369053          
S/G/Y/R/B/O NT_004671AL5922031922636223          
S/G/Y/R/B/O NT_004671AL7318691924431573          
S/G/Y/R/B/O NT_004671AL3530721924485603          
S/G/Y/R/B/O NT_004671AL1600571926182423          
S/G/Y/R/B/O NT_004671AL3579321927235703          


  NT_004671 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004671AL1617381930468413RH493811654.25    1 AL138926.13, AL161738.15
S/G/Y/R/B/O NT_004671AL1389261930481953          
S/G/Y/R/B/O NT_004671AL3581191932153573          
S/G/Y/R/B/O NT_004671AL1623981933704813          
S/G/Y/R/B/O NT_004671AL3537091934014133          
S/G/Y/R/B/O NT_004671AL5923081935328313          
S/G/Y/R/B/O NT_004671AL6457541937014123          
S/G/Y/R/B/O NT_004671AL5921441937143993          
S/G/Y/R/B/O NT_004671AL1391371939085443          
S/G/Y/R/B/O NT_004671AL1389311940458133          
S/G/Y/R/B/O NT_004671 - RH114471646.97    0  
S/G/Y/R/B/O NT_004671 - RH663931650.46    0