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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034406
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034406AL1099211712936943WI-13443    1777.801 AL109921.21
S/G/Y/R/B/O NT_034406AL1099211712936943RH639581619.42    1 AL109921.21
S/G/Y/R/B/O NT_034406AL1099211712951043RH940951623.30    1 AL109921.21
S/G/Y/R/B/O NT_034406AL1099211713080853RH694451623.30    1 AL109921.21
S/G/Y/R/B/O NT_034406AL6914871713666043RH701001623.30    1 AL109921.21, AL591203.15
S/G/Y/R/B/O NT_034406AL1361701713722763RH760581620.45    1 AL591203.15
S/G/Y/R/B/O NT_034406AL1361701713723763RH37814  16834.00  1 AL591203.15
S/G/Y/R/B/O NT_034406AL1361701714110473RH1045241625.19    1 AL691487.9
S/G/Y/R/B/O NT_034406AL1361701714117723RH943191625.19    1 AL691487.9
S/G/Y/R/B/O NT_034406AL1361701714124953RH116311625.19    1 AL691487.9
S/G/Y/R/B/O NT_034406AL1361701714255413RH708041625.19    1 AL691487.9
S/G/Y/R/B/O NT_034406AL1361701714258093RH110761625.19    1 AL691487.9
S/G/Y/R/B/O NT_034406AL1361701714459893RH473581625.19    1 AL136170.13
S/G/Y/R/B/O NT_034406AL1361701714891013RH38122  16868.00  1 AL136170.13
S/G/Y/R/B/O NT_034406AL1219831715195713RH696771625.19    1 AL121983.13
S/G/Y/R/B/O NT_034406AL1219831715195733RH913301625.19    1 AL121983.13
S/G/Y/R/B/O NT_034406AL1219831715250553RH156541625.19    1 AL121983.13
S/G/Y/R/B/O NT_034406AL0312861716755233RH33457  16893.001779.201 AL031286.2, AL359177.3, AL359177.3
S/G/Y/R/B/O NT_034406AL0312861716755233RH506061618.07    1 AL031286.2, AL359177.3, AL359177.3
S/G/Y/R/B/O NT_034406AL0312861716755233RH686541625.09    1 AL031286.2, AL359177.3, AL359177.3
S/G/Y/R/B/O NT_034406AL0224001718005523CHLC.ATA4E02    1779.201 AL022400.8
S/G/Y/R/B/O NT_034406AL0221711719117063RH422661625.09  1780.901 AL022171.1
S/G/Y/R/B/O NT_034406AL0221711719117063RH1041  16880.00  1 AL022171.1
S/G/Y/R/B/O NT_034406AL0221711719548243RH284621618.68    1 AL022171.1
S/G/Y/R/B/O NT_034406AL0312781719897783RH461041627.38    1 AL031278.1
S/G/Y/R/B/O NT_034406AL0210691720425613RH491361625.65  1780.901 AL021069.1
S/G/Y/R/B/O NT_034406AL0210691720425613RH35088  16921.00  1 AL021069.1
S/G/Y/R/B/O NT_034406AL0210691720576363RH647321625.65    1 AL021069.1
S/G/Y/R/B/O NT_034406AL5911081721674083RH688571625.65    1 AC011220.4, AL136377.15, AL591108.18
S/G/Y/R/B/O NT_034406AL1363771721850063          
S/G/Y/R/B/O NT_034406AL1616711722632163          
S/G/Y/R/B/O NT_034406AL0087351723685793RH38222  16936.00  1 AL008735.2, AP002809.1
S/G/Y/R/B/O NT_034406AL0087351723685873RH697431625.65    1 AL008735.2, AP002809.1
S/G/Y/R/B/O NT_034406AL0087351723687583RH981961625.89    1 AL008735.2, AP002809.1