Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_004350	NT_004321	NT_004547	NT_034374	NT_022058	NT_021917	NT_028054	NT_032967
NT_021937	NT_034375	NT_022041	NT_004873	NT_034376	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_034377	NT_030571	NT_004782	NT_028053	NT_034378
NT_004538	NT_034379	NT_034380	NT_004511	NT_004852	NT_032963	NT_032971	NT_032972
NT_004386	NT_032977	NT_004424	NT_032973	NT_029223	NT_029865	NT_031737	NT_004636
NT_034381	NT_032948	NT_034382	NT_004464	NT_034383	NT_034384	NT_004483	NT_032974
NT_004902	NT_034385	NT_026943	NT_034386	NT_029231	NT_034387	NT_004658	NT_004686
NT_034388	NT_021979	NT_034389	NT_034390	NT_034391	NT_030565	NT_034392	NT_034393
NT_028050	NT_030567	NT_034394	NT_021977	NT_034395	NT_029860	NT_019273	NT_034396
NT_031697	NT_004754	NT_032975	NT_022052	NT_034397	NT_022071	NT_004434	NT_034398
NT_034399	NT_034400	NT_034401	NT_034402	NT_034403	NT_032962	NT_034428	NT_021907
NT_004441	NT_030577	NT_004858	NT_004982	NT_026945	NT_004668	NT_034404	NT_034405
NT_029874	NT_034406	NT_004487	NT_021905	NT_004599	NT_034407	NT_004671	NT_004416
NT_029862	NT_034408	NT_034409	NT_034410	NT_034411	NT_032947	NT_029226	NT_021877
NT_031718	NT_034412	NT_034413	NT_004612	NT_034414	NT_034415	NT_021953	NT_004861
NT_004525	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433	NT_034416
NT_030561	NT_034417	NT_004836	NT_004771	NT_004734	NT_031700	NT_004536	NT_032964
NT_031730	NT_029870	NT_032969	NT_032968	NT_034418

NT_004782

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	All Accessions
S/G/Y/R/B/O	NT_004782	AL606491	25374880	3	RH36283	1	85.62					1	AL606491.19
S/G/Y/R/B/O	NT_004782	AL606491	25374936	3	RH67401	1	85.62					1	AL606491.19
S/G/Y/R/B/O	NT_004782	AL606491	25375086	3	RH12580	1	82.39					1	AL606491.19
S/G/Y/R/B/O	NT_004782	AL031280	25511496	3	RH33829			1	1548.00			1	AL031280.7, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25590757	3	WI-8136					1	85.50	1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25590757	3	RH63878	1	85.52					1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25590887	3	RH25837	1	85.21					1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25592258	3	WI-14148					1	84.20	1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25592258	3	RH64429	1	85.42					1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25592397	3	RH16973	1	82.39					1	AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25592690	3	RH36069	1	85.52					1	AC013605.2, AL020996.6
S/G/Y/R/B/O	NT_004782	AL020996	25592730	3	RH36124	1	82.39					1	AC013605.2, AC111160.1, AL020996.6, AL356602.11
S/G/Y/R/B/O	NT_004782	AL020996	25611202	3	RH67758	1	87.16					1	AL020996.6
S/G/Y/R/B/O	NT_004782	AL020996	25624505	3	RH69693	1	87.01					1	AL020996.6
S/G/Y/R/B/O	NT_004782	AL020996	25631485	3	WI-11524					1	85.60	1	AC010855.3, AC111160.1, AC111160.1, AC111160.1
S/G/Y/R/B/O	NT_004782	AL020996	25631485	3	RH63917	1	82.39					1	AC010855.3, AC111160.1, AC111160.1, AC111160.1
S/G/Y/R/B/O	NT_004782	AL020996	25639260	3	RH11907	1	85.42					2	AC010855.3, AC090439.8, AC111160.1, AL020996.6
S/G/Y/R/B/O	NT_004782	AL020996	25641694	3	RH48467	1	85.31					1	AC010855.3, AL020996.6
S/G/Y/R/B/O	NT_004782	AL033528	25706848	3	WI-9053					1	85.60	1	AL033528.19, AL355525.9
S/G/Y/R/B/O	NT_004782	AL033528	25706848	3	RH49600	1	85.31					1	AL033528.19, AL355525.9
S/G/Y/R/B/O	NT_004782	AL033528	25706924	3	RH70969	1	82.39					1	AC016183.2, AL033528.19, AL355525.9
S/G/Y/R/B/O	NT_004782	AL033528	25706962	3	RH26022	1	83.60					1	AC016183.2, AL033528.19, AL355525.9
S/G/Y/R/B/O	NT_004782	AL645996	25727334	3
S/G/Y/R/B/O	NT_004782	AL592064	25756908	3	RH92801	1	85.62					1	AC010855.3, AL355525.9, AL592064.14
S/G/Y/R/B/O	NT_004782	AL592064	25766490	3	RH69464	1	82.39					1	AC010855.3, AC015699.3, AL355525.9, AL592064.14
S/G/Y/R/B/O	NT_004782	AL592064	25766535	3	RH75076	1	87.06					1	AC010855.3, AL355525.9, AL592064.14
S/G/Y/R/B/O	NT_004782	AL592064	25768106	3	RH75820	1	85.52					1	AC010855.3, AL355525.9, AL592064.14
S/G/Y/R/B/O	NT_004782	AL391650	25842828	3	WI-21113					1	85.60	1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25842828	3	RH50159	1	85.42					1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25842966	3	RH76511	1	82.59					1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25844763	3	WI-17216					9	307.80	1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25855313	3	RH67306	1	82.39					1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25858029	3	RH41902	1	85.31					1	AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25931939	3	RH36615	1	85.52					1	AL355859.12, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25931957	3	RH67465	1	82.39					1	AL355859.12, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25977136	3	RH49746	1	87.06			1	87.30	1	AL355859.12, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25977369	3	RH41960	1	87.16					1	AL355859.12, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25977389	3	RH80379	1	86.96					1	AL355859.12, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25996341	3	RH75167	1	88.30					1	AL355859.12, AL355877.25, AL391650.18
S/G/Y/R/B/O	NT_004782	AL391650	25996371	3	RH67008	1	87.06					1	AL355859.12, AL355877.25, AL391650.18
S/G/Y/R/B/O	NT_004782	AL355877	26009466	3	RH92197	1	88.51					1	AL355859.12, AL355877.25
S/G/Y/R/B/O	NT_004782	AL451139	26085180	3	RH102252	1	88.61					1	AL451139.40
S/G/Y/R/B/O	NT_004782	AL451139	26087963	3	RH91491	1	89.02					1	AL451139.40
S/G/Y/R/B/O	NT_004782	AL451139	26088000	3	RH80614	1	88.30					1	AL451139.40
S/G/Y/R/B/O	NT_004782	AL451139	26126951	3	RH70873	1	88.51					1	AL451139.40
S/G/Y/R/B/O	NT_004782	AL451139	26127014	3	RH71015	1	88.61			1	88.50	1	AL451139.40
S/G/Y/R/B/O	NT_004782	AL451139	26128592	3	RH69989	1	87.01					1	AL451139.40
S/G/Y/R/B/O	NT_004782		-		RH11127	1	88.41					1	AL513365.26
S/G/Y/R/B/O	NT_004782		-		RH64650	1	88.41					0
S/G/Y/R/B/O	NT_004782		-		RH71226	1	88.30					0	AC022307.14, AL121991.40