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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004771
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004771AL5132092368404013WI-3538    1915.101 AL158845.3, AL513209.15
S/G/Y/R/B/O NT_004771AL5838252369093193          
S/G/Y/R/B/O NT_004771AL5961072371061133          
S/G/Y/R/B/O NT_004771AL6719852371360893          
S/G/Y/R/B/O NT_004771AL6065032371419823          
S/G/Y/R/B/O NT_004771AL5901352372830863          
S/G/Y/R/B/O NT_004771AC0934262373585133          
S/G/Y/R/B/O NT_004771AL5131892375256133          
S/G/Y/R/B/O NT_004771AL6273882375994093AFM211YH4    1918.801 AC099564.2, AL627388.20
S/G/Y/R/B/O NT_004771AC0995642376005493          
S/G/Y/R/B/O NT_004771AL3574992378040143RH663641746.13    1 AC015901.4, AL357499.10
S/G/Y/R/B/O NT_004771AL3574992378041373RH648571746.13    1 AC015901.4, AL357499.10
S/G/Y/R/B/O NT_004771AL3574992378404903WI-5908    1918.801 AC015901.4, AL357499.10
S/G/Y/R/B/O NT_004771AL5135432379458333RH639381746.13    1 AC011141.3, AC015901.4, AL513543.14
S/G/Y/R/B/O NT_004771AL5135432379458333RH269831746.13    1 AC011141.3, AC015901.4, AL513543.14
S/G/Y/R/B/O NT_004771AL5135432379459073RH184901746.13    1 AC015901.4, AL513543.14
S/G/Y/R/B/O NT_004771AC1044602380762403WI-10464    1916.401 AC011141.3, AC013517.5, AC104460.2
S/G/Y/R/B/O NT_004771AL3563612381459833RH100861746.13    1 AL356361.21
S/G/Y/R/B/O NT_004771AL3563612381480093RH697611746.13    1 AL356361.21
S/G/Y/R/B/O NT_004771AL3563612381520423RH643661746.34  1918.701 AL356361.21
S/G/Y/R/B/O NT_004771AC0217922382569111          
S/G/Y/R/B/O NT_004771AL3599182382606251          
S/G/Y/R/B/O NT_004771AC0207262384282871          
S/G/Y/R/B/O NT_004771AL5133422384752893          
S/G/Y/R/B/O NT_004771AL5904902386024973          
S/G/Y/R/B/O NT_004771AL6460162386522673          
S/G/Y/R/B/O NT_004771AL3581762387387563RH646381747.70    1 AL356105.4, AL358176.22
S/G/Y/R/B/O NT_004771AL3581762387387583RH683231747.70    1 AL356105.4, AL358176.22
S/G/Y/R/B/O NT_004771AL3581762387389213RH503941747.07  1918.201 AL356105.4, AL358176.22
S/G/Y/R/B/O NT_004771AL3581762387922303RH928201747.70    1 AL358176.22
S/G/Y/R/B/O NT_004771AL5909652389625663RH493731746.3419319.00  1 AL590965.17, AL596206.5
S/G/Y/R/B/O NT_004771AL3651842390247513RH642311746.02  1918.101 AL365184.12
S/G/Y/R/B/O NT_004771AL3651842390247513RH126501746.13    1 AL365184.12
S/G/Y/R/B/O NT_004771AL3651842391411163WI-4866    1918.101 AC021359.2, AC022067.2, AL365184.12
S/G/Y/R/B/O NT_004771AL5960822391504073          
S/G/Y/R/B/O NT_004771AL5906822391794103RH644471749.03  1919.601 AC021359.2, AC022067.2, AL590682.9
S/G/Y/R/B/O NT_004771AL5123072393743643RH134461750.4419344.00  1 AL512307.12, AL590437.4
S/G/Y/R/B/O NT_004771AL5920762395018093          
S/G/Y/R/B/O NT_004771AL3597642396920953RH22771750.44  1921.201 AL359764.18
S/G/Y/R/B/O NT_004771AL3597642396920953RH1123  19349.00  1 AL359764.18
S/G/Y/R/B/O NT_004771AL3597642397468243RH1290  19349.00  1 AL359764.18
S/G/Y/R/B/O NT_004771AL3597642397468523RH644851752.13    1 AL359764.18
S/G/Y/R/B/O NT_004771AL6064762397551083          
S/G/Y/R/B/O NT_004771AL5918982397619563AFM214XE11    1922.801 AL591898.1
S/G/Y/R/B/O NT_004771AL5918982398143933RH472621750.44    1 AL591898.1
S/G/Y/R/B/O NT_004771AL5918982398145333RH711001750.44    1 AL591898.1
S/G/Y/R/B/O NT_004771AL1333902398411363RH33140  19354.001922.801 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398411363RH643801753.76    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398411803RH264791750.44    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398417973CHLC.GATA4A09.519    1932.001 AL133390.7


  NT_004771 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004771AL1333902398423923RH271901752.54    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398423923RH711271752.34    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398444933RH497991750.44  1921.201 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398461993RH644541750.4419354.001921.201 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398782783RH110331750.44    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398825533RH991491750.44    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398828133RH502671750.44  1921.201 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398828133RH362851750.44    1 AL133390.7
S/G/Y/R/B/O NT_004771AL1333902398828173RH9032  19354.00  1 AL133390.7
S/G/Y/R/B/O NT_004771AL5918972398968853          
S/G/Y/R/B/O NT_004771 - RH703761747.07    0  
S/G/Y/R/B/O NT_004771 - RH1008  19133.00  1 AL356745.6, AL626763.11
S/G/Y/R/B/O NT_004771 - RH713321745.18    0  
S/G/Y/R/B/O NT_004771 - RH1336  19092.00  1 AL451053.3, AL590133.32
S/G/Y/R/B/O NT_004771 - RH932461750.44    0  
S/G/Y/R/B/O NT_004771 - RH30716  19078.00  1 AC013657.3, AC016053.4, AL356369.9, AL360294.11, AL592290.3
S/G/Y/R/B/O NT_004771 - RH32071  19110.00  1 AL157880.14, AL158214.33, AL512328.15
S/G/Y/R/B/O NT_004771 - RH34572  19117.00  1 AL732414.9
S/G/Y/R/B/O NT_004771 - RH34680  19354.00  0  
S/G/Y/R/B/O NT_004771 - RH42845  19067.00  0 AL391984.1
S/G/Y/R/B/O NT_004771 - RH923  19171.00  1 AL357112.9, AL663105.4
S/G/Y/R/B/O NT_004771 - RH928  19067.00  1 AL161640.23, AL359756.12