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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_032962
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032962AL3588131472281493          
S/G/Y/R/B/O NT_032962AL5914931474045491WI-8997    1570.401 AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474099151SGC32297    1517.001 AL357493.5, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474438961RH664971536.52    2 AC018785.3, AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474472551RH987491551.93    2 AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474552781RH690221553.48    2 AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474575461RH33730  16930.00  1 AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474644731RH690221553.48    2 AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474725031RH987491551.93    2 AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474758581RH664971536.52    2 AC018785.3, AL591493.12, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474974901WI-7732    1627.901 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474974901RH502521553.34    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931474975711RH108481553.34    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475128701RH183681553.44    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475135951WI-16272    1634.901 AC018785.3
S/G/Y/R/B/O NT_032962AL5914931475135951RH642531551.93    1 AC018785.3
S/G/Y/R/B/O NT_032962AL5914931475136641TIGR-A003N45    1627.901 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475136641RH507281543.50    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475137681RH267951536.58    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475165651RH128501552.71    1 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AL5914931475168311RH638721551.93  1641.301 AC018785.3, AL591493.12
S/G/Y/R/B/O NT_032962AC0187851475404651          
S/G/Y/R/B/O NT_032962AL5904871475519043RH365691551.93    1 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871475609893RH643541551.93  1643.601 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871475642703RH711171538.16    1 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871475643993RH167921556.38    1 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871475644393WI-8123    1632.701 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871475644393RH638771538.16    1 AC018785.3, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871476255343RH921931550.22    1 AC018785.3, AL358073.24, AL358353.11, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871476289053RH505831540.02    1 AC022064.3, AC022243.2, AL358073.24, AL358353.11, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871476289053WI-16732    1643.501 AC022064.3, AC022243.2, AL358073.24, AL358353.11, AL590487.20
S/G/Y/R/B/O NT_032962AL5904871476290203RH270501553.48    1 AC022064.3, AL358073.24, AL358353.11, AL590487.20
S/G/Y/R/B/O NT_032962AL3580731476687323RH1037781538.16    1 AL358073.24
S/G/Y/R/B/O NT_032962AL3580731476690743RH694331553.55    1 AL358073.24, AL358353.11
S/G/Y/R/B/O NT_032962AL3580731477681373WI-14283    1635.701 AC022243.2, AL358073.24
S/G/Y/R/B/O NT_032962AL3580731477681373RH500471538.38    1 AC022243.2, AL358073.24
S/G/Y/R/B/O NT_032962AL3580731477683483RH117551542.25    1 AL358073.24
S/G/Y/R/B/O NT_032962AL3580731477826453WI-8440    1627.501 AC022243.2, AL358073.24
S/G/Y/R/B/O NT_032962AL3580731477826453RH638861543.71    1 AC022243.2, AL358073.24
S/G/Y/R/B/O NT_032962AL3580731477827423RH170811553.55    1 AC022243.2, AL358073.24
S/G/Y/R/B/O NT_032962AL1387951478432763RH1020781553.55    1 AL138795.21
S/G/Y/R/B/O NT_032962AL1387951478440533RH938871538.04    1 AL138795.21
S/G/Y/R/B/O NT_032962AL1387951478883503SGC32182    1627.701 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951478883503RH642681537.26    1 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951478889183SGC31751    1634.901 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951478889183RH710611540.36    1 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951478889873RH255601536.80    1 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951478893863RH13819  11761.00  1 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951479000843RH704161553.55    1 AL138795.21, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951479103493RH938711538.04    1 AL138795.21, AL365403.14


  NT_032962 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032962AL1387951479317313RH163711553.55    1 AC026050.3, AL138795.21, AL359875.3, AL359883.7, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951479317893SGC32664    1634.802  
S/G/Y/R/B/O NT_032962AL1387951479317893RH503461542.25    2  
S/G/Y/R/B/O NT_032962AL1387951479320373SGC32206    1636.201 AC026050.3, AL138795.21, AL359875.3, AL359883.7, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951479320373RH643121541.74    1 AC026050.3, AL138795.21, AL359875.3, AL359883.7, AL365403.14
S/G/Y/R/B/O NT_032962AL1387951479320373RH32320  13135.00  1 AC026050.3, AL138795.21, AL359875.3, AL359883.7, AL365403.14
S/G/Y/R/B/O NT_032962AL6119421479766133RH670138346.11    1 AC026050.3, AL359883.7, AL365403.14, AL611942.12
S/G/Y/R/B/O NT_032962AL6119421480143613RH644981541.31    1 AC026050.3, AL359883.7, AL365403.14, AL611942.12
S/G/Y/R/B/O NT_032962AL6119421480391903RH486501540.09    1 AC026050.3, AL359875.3, AL359883.7, AL365403.14, AL611942.12
S/G/Y/R/B/O NT_032962 - WI-17524    1628.301 AC053497.4, AL356356.17
S/G/Y/R/B/O NT_032962 - SGC30813    1628.501 AC068971.2, AL391335.23, AL589765.19
S/G/Y/R/B/O NT_032962 - WI-16232    1628.501 AL158846.4, AL391069.11
S/G/Y/R/B/O NT_032962 - WI-15174    1628.501 AL135842.15