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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_032963
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032963AL445669428994183RH485201133.84    1 AL355801.9, AL445669.9, AL513331.15
S/G/Y/R/B/O NT_032963AL445669429929833D1S193    1144.301 AL445669.9
S/G/Y/R/B/O NT_032963AL445669429929833RH132101127.56    1 AL445669.9
S/G/Y/R/B/O NT_032963AL445669429929833RH790  12323.00  1 AL445669.9
S/G/Y/R/B/O NT_032963AL445669430105353RH1042191127.56    1 AL445669.9
S/G/Y/R/B/O NT_032963AL138788430805593RH150591127.56    1 AL138788.6
S/G/Y/R/B/O NT_032963AL138788430830763WI-15744    1144.401 AL138788.6
S/G/Y/R/B/O NT_032963AL138788430830763RH497671133.16    1 AL138788.6
S/G/Y/R/B/O NT_032963AC098484431571883RH704671142.82    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484431707623RH1755  12350.00  1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484431857133RH501941127.56  1144.201 AC098484.2
S/G/Y/R/B/O NT_032963AC098484431857613RH647901133.84    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432048143RH1381  12362.00  1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432149653RH929821127.56    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432149933WI-16985    1144.701 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432149933RH644631134.78    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432156293RH419691130.70    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432192783RH694411127.56    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432277863RH919421134.78    1 AC098484.2
S/G/Y/R/B/O NT_032963AC098484432464693RH669331127.56    1 AC023331.4
S/G/Y/R/B/O NT_032963AC098484432465953RH988441127.56    1 AC023331.4, AC098484.2
S/G/Y/R/B/O NT_032963AC098484432526473RH711381126.44    1 AC023331.4, AC098484.2, AL512353.16
S/G/Y/R/B/O NT_032963AL512353432839593WI-15933    1144.701 AC023331.4, AL512353.16
S/G/Y/R/B/O NT_032963AL512353432839593RH642131134.78    1 AC023331.4, AL512353.16
S/G/Y/R/B/O NT_032963AL512353432914033RH1020541127.56    1 AC023331.4, AL512353.16
S/G/Y/R/B/O NT_032963AC023331434141751RH110191127.56    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434141861RH643391127.56  1144.701 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434147701RH682581133.43    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434147861RH914711127.56    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434149151RH1375  12356.00  1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434149421RH689801127.56    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC023331434150811RH174201127.56    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC099795433425601RH37847  122610.00  1  
S/G/Y/R/B/O NT_032963AC099795433893361RH1019471132.49    1 AC023331.4, AC099795.1
S/G/Y/R/B/O NT_032963AC099795434449201RH779481129.07    1 AC099795.1, AL161637.6
S/G/Y/R/B/O NT_032963AC118558434565883          
S/G/Y/R/B/O NT_032963AC025504435084111          
S/G/Y/R/B/O NT_032963AL139138435287853RH801161129.17    1 AC025504.3, AL139138.17, AL161637.6, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435309323D1S443    1148.101 AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435309323RH21361133.74    1 AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435640833RH643791129.36  1145.501 AC025504.3, AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435640833RH699721132.38    1 AC025504.3, AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435726013RH117741129.36    1 AC025504.3, AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AL139138435796093RH645461129.36    1 AC025504.3, AL139138.17, AL391554.2
S/G/Y/R/B/O NT_032963AC093420436336541RH482111139.31    1 AC025504.3, AC093420.1
S/G/Y/R/B/O NT_032963AC093420436628181RH1032951129.48    1 AC093420.1, AL356007.9
S/G/Y/R/B/O NT_032963AC093420436708691RH654871133.84    1 AC093420.1, AL356007.9
S/G/Y/R/B/O NT_032963AC093420437314181RH638291129.36  1145.301 AC093420.1, AL139289.6, AL356007.9
S/G/Y/R/B/O NT_032963AC093420437314871RH14145  12350.00  1 AC093420.1, AL139289.6, AL356007.9
S/G/Y/R/B/O NT_032963AC093420437315711RH702641129.36    1 AC093420.1, AL139289.6, AL356007.9


  NT_032963 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032963AC093420437316811RH708541129.48    1 AC093420.1, AL139289.6, AL356007.9
S/G/Y/R/B/O NT_032963AL139289437615553RH802311129.98    1 AC093420.1, AL139289.6, AL356007.9
S/G/Y/R/B/O NT_032963AL139289437631233RH470181139.31    1 AC093420.1, AL139289.6
S/G/Y/R/B/O NT_032963AL139289437721863RH257431129.36    1 AC093420.1, AL139289.6, AL355519.8, AL356007.9
S/G/Y/R/B/O NT_032963AL139289437722523RH128281125.97    1 AC093420.1, AL139289.6, AL355519.8, AL356007.9
S/G/Y/R/B/O NT_032963AL139289437926833RH100681125.97    1 AL139289.6, AL355519.8
S/G/Y/R/B/O NT_032963AL139289437927243RH159831125.97    1 AL139289.6, AL355519.8
S/G/Y/R/B/O NT_032963 - RH103061129.36    0  
S/G/Y/R/B/O NT_032963 - RH1201  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_032963 - RH1034241129.36    0 AL355519.8
S/G/Y/R/B/O NT_032963 - RH1215  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_032963 - RH1040321126.44    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH14117  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_032963 - RH1045491126.44    0  
S/G/Y/R/B/O NT_032963 - RH14186  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_032963 - RH168621126.44    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH33535  12362.00  0 AL512786.2
S/G/Y/R/B/O NT_032963 - RH369451127.36    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH37798  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_032963 - RH497551126.27    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH643441129.98  1145.200 AC005043.2, AC005087.1, AL035417.15
S/G/Y/R/B/O NT_032963 - RH506631129.98    1 AL359473.22
S/G/Y/R/B/O NT_032963 - WI-14032    1145.200 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH507431127.66    0 AL513331.15
S/G/Y/R/B/O NT_032963 - RH655921126.44    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032963 - RH693451129.79    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032963 - RH704921129.36    0 AL512786.2, AL583862.32
S/G/Y/R/B/O NT_032963 - RH754721127.56    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032963 - RH797241129.07    0 AC023331.4
S/G/Y/R/B/O NT_032963 - RH804121129.79    0 AC004254.1
S/G/Y/R/B/O NT_032963 - RH990991129.98    1 AL359473.22