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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034380
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034380AC114488318561621RH79572198.53    1 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488318591071RH78025198.63    1 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488319258231RH762571102.41    1 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488319258341RH50395198.5311710.001101.901 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488319259551RH76723196.82    1 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488319259961RH69199198.53    1 AC068629.35, AC114488.1
S/G/Y/R/B/O NT_034380AC114488320005381IB428    1102.101 AC068629.35, AC114488.1, AL354919.12
S/G/Y/R/B/O NT_034380AC114488320005381RH49966196.82    1 AC068629.35, AC114488.1, AL354919.12
S/G/Y/R/B/O NT_034380AC114488320005411RH36762194.68    1 AC068629.35, AC114488.1, AL354919.12
S/G/Y/R/B/O NT_034380AL354919320228681          
S/G/Y/R/B/O NT_034380AL136115321838171RH64430192.55  191.701 AL136115.18, AL139160.3, AP000933.4, AP002344.1
S/G/Y/R/B/O NT_034380AL136115321840891RH505931100.65    1 AL136115.18, AL139160.3, AP000933.4, AP002344.1
S/G/Y/R/B/O NT_034380AL136115321840891WI-21682    1110.601 AL136115.18, AL139160.3, AP000933.4, AP002344.1
S/G/Y/R/B/O NT_034380AL136115321852621RH26035194.68    1 AL136115.18, AL139160.3, AP000933.4, AP002344.1
S/G/Y/R/B/O NT_034380AP002344322570301          
S/G/Y/R/B/O NT_034380AL139249322669973          
S/G/Y/R/B/O NT_034380AL445248323235433RH647611100.9611733.00  1 AL445248.7, AP000933.4
S/G/Y/R/B/O NT_034380AL445248323413143RH46971194.68    1 AL445248.7, AP000933.4
S/G/Y/R/B/O NT_034380AL445248323833873RH127451102.41    1 AL445248.7, AP000933.4
S/G/Y/R/B/O NT_034380AL445248323834713RH501311100.65  1109.501 AL445248.7, AP000933.4
S/G/Y/R/B/O NT_034380AL049795324536773RH160081100.96    1 AL049795.21
S/G/Y/R/B/O NT_034380AL049795324538093RH170501100.96    1 AL049795.21
S/G/Y/R/B/O NT_034380AL049795324557903RH364041100.96    1 AL049795.21
S/G/Y/R/B/O NT_034380AL049795324570053RH677811102.36    1 AL049795.21
S/G/Y/R/B/O NT_034380AL049795324571673RH66672194.68    1 AL049795.21
S/G/Y/R/B/O NT_034380AL049795324769293RH359101100.96    1 AL049795.21, AL121991.40
S/G/Y/R/B/O NT_034380AL049795324790433RH629619136.59  9140.601 AL049795.21, AL121991.40
S/G/Y/R/B/O NT_034380AL049795324971323RH75425195.30    1 AC022307.14, AL049795.21, AL121991.40
S/G/Y/R/B/O NT_034380AL049795324974583RH98271194.68    1 AC022307.14, AL049795.21, AL121991.40
S/G/Y/R/B/O NT_034380AL049795325071033RH64484193.07    1 AC022307.14, AL049795.21, AL121991.40
S/G/Y/R/B/O NT_034380 - RH500451100.96    0 AC022307.14, AL121991.40
S/G/Y/R/B/O NT_034380 - RH33215  11705.00  1 AC068971.2, AL391335.23, AL589765.19
S/G/Y/R/B/O NT_034380 - RH690981100.14    0 AC022307.14, AL121991.40
S/G/Y/R/B/O NT_034380 - RH33383  11705.00  1 AC068971.2, AL589765.19
S/G/Y/R/B/O NT_034380 - RH693801100.96    0 AC022307.14, AL121991.40
S/G/Y/R/B/O NT_034380 - RH8729  11705.00  1 AL450992.17