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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004636
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004636AL513493661204853          
S/G/Y/R/B/O NT_004636AL592285662862653          
S/G/Y/R/B/O NT_004636AL590783664600963RH642841177.63  1206.701 AL391359.6, AL590783.5
S/G/Y/R/B/O NT_004636AL591487665917343          
S/G/Y/R/B/O NT_004636AL357273666089483          
S/G/Y/R/B/O NT_004636AL109926666936843RH695721176.56    1 AL109926.9
S/G/Y/R/B/O NT_004636AL109926667900463RH645241177.10    1 AL109926.9, AL356736.3, AL359701.27
S/G/Y/R/B/O NT_004636AL359701667993213RH496221176.6113318.001205.301 AL359701.27
S/G/Y/R/B/O NT_004636AL359701668007683RH504861177.31  1205.501 AL359701.27
S/G/Y/R/B/O NT_004636AL356913669721213RH21501178.69  1207.301 AC016508.5, AC024392.2, AL356913.15
S/G/Y/R/B/O NT_004636AL391820669941413          
S/G/Y/R/B/O NT_004636AL139147670962433SGC30800    1207.302 AL137158.7, AL139147.6, AL603790.19
S/G/Y/R/B/O NT_004636AL139147670962433RH642411143.35    2 AL137158.7, AL139147.6, AL603790.19
S/G/Y/R/B/O NT_004636AL354978671768721RH642361180.12  1207.301 AC026063.4, AL137158.7, AL137158.7, AL354978.20
S/G/Y/R/B/O NT_004636AL354978672000921RH508191182.23  1207.201 AC026063.4, AL354978.20
S/G/Y/R/B/O NT_004636AL592161672390693RH664911177.77    1 AL354978.20, AL592161.6
S/G/Y/R/B/O NT_004636AL139216673738353RH463911178.90    1 AL139216.14
S/G/Y/R/B/O NT_004636AL139216673767313RH645921179.42    1 AL139216.14
S/G/Y/R/B/O NT_004636AL139216673778043RH123031180.73    1 AL139216.14
S/G/Y/R/B/O NT_004636AL500525674122453RH645551180.73    1 AL500525.4
S/G/Y/R/B/O NT_004636AL500525674152123SGC32050    1206.901 AL500525.4
S/G/Y/R/B/O NT_004636AL500525674152123RH32296  13669.00  1 AL500525.4
S/G/Y/R/B/O NT_004636AL500525674152123RH121301179.42    1 AL500525.4
S/G/Y/R/B/O NT_004636AL500525674255583RH647691177.7313307.00  1 AL500525.4
S/G/Y/R/B/O NT_004636AL500525674264833RH464581143.87    1 AL500525.4
S/G/Y/R/B/O NT_004636AL133320674294113          
S/G/Y/R/B/O NT_004636AL109843675586563          
S/G/Y/R/B/O NT_004636AL389925677638423RH184261182.13    1 AC026054.3, AL389925.10
S/G/Y/R/B/O NT_004636AL358512678222503RH759051178.09    1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678286473RH493871182.13    1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678286473RH31581  13676.00  1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678355233RH119871175.49    1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678366313RH38134  13622.00  1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678366843RH747771178.27    1 AL358512.9
S/G/Y/R/B/O NT_004636AL358512678372563RH1356  13676.00  3 AL008721.1, AL358512.9, AL590559.3, Z99716.4
S/G/Y/R/B/O NT_004636AL358512678374833RH471281179.83    1 AL358512.9, AL590559.3
S/G/Y/R/B/O NT_004636AL358512678375733RH471811178.90    1 AL358512.9, AL590559.3
S/G/Y/R/B/O NT_004636AL590559678390203          
S/G/Y/R/B/O NT_004636AL359268679876713          
S/G/Y/R/B/O NT_004636AL139258680001973          
S/G/Y/R/B/O NT_004636AL136120681072913RH508081180.73  1207.301 AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL136120681140123RH690291179.42    1 AC046169.1, AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL136120681292273RH251501179.42    1 AC046169.1, AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL136120681305333RH941501179.42    1 AC046169.1, AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL136120681305453RH683441182.13    1 AC046169.1, AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL136120681354253WI-5552    1208.601 AC046169.1, AL136120.8, AL391871.2
S/G/Y/R/B/O NT_004636AL499611682007643          
S/G/Y/R/B/O NT_004636AL391703682129993RH30679  13637.00  1 AC046169.1, AL391703.9
S/G/Y/R/B/O NT_004636AL391703682147063RH498461177.31  1210.101 AC046169.1, AL391703.9, AL391871.2
S/G/Y/R/B/O NT_004636AL391703682147063RH33230  13662.00  1 AC046169.1, AL391703.9, AL391871.2


  NT_004636 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004636AL391703682446313RH700811179.29    1 AL391703.9
S/G/Y/R/B/O NT_004636AL391703682809053RH687451183.56    1 AL391703.9
S/G/Y/R/B/O NT_004636AL157407684721413RH638641184.45  1210.001 AL157407.11
S/G/Y/R/B/O NT_004636AL157407685246463RH683551191.33    1 AC010986.4, AL157407.11
S/G/Y/R/B/O NT_004636AL513284685452123RH642041184.86  1210.601 AC010986.4, AL513284.12
S/G/Y/R/B/O NT_004636AL513284685453173RH257091184.91    1 AC010986.4, AL513284.12
S/G/Y/R/B/O NT_004636AL513284685465683RH258341184.86    1 AC010986.4, AL161795.2, AL513284.12
S/G/Y/R/B/O NT_004636AL513284685516193RH171611191.64    1 AC010986.4, AL161795.2, AL513284.12
S/G/Y/R/B/O NT_004636AL513284685595363RH645181185.64    1 AC010986.4, AL161795.2, AL513284.12
S/G/Y/R/B/O NT_004636AL513284686683533AFM316VB5    1211.101 AC010986.4, AL513284.12
S/G/Y/R/B/O NT_004636 - RH1045591184.96    0  
S/G/Y/R/B/O NT_004636 - WI-5642    1210.101 AC026608.2, AL355808.9, AL603844.7
S/G/Y/R/B/O NT_004636 - RH690421179.42    1 AP000832.2, AP000843.4, AP000912.2