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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_034400
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_034400AL1391521447229203RH645641535.89    2 AC026900.3, AL138796.6, AL139152.7, AL592491.7
S/G/Y/R/B/O NT_034400AL1391521447272793RH925351535.89    2 AL138796.6, AL139152.7, AL590452.12, AL592491.7
S/G/Y/R/B/O NT_034400AL5961771447684753RH708811535.33    1 AL596177.4
S/G/Y/R/B/O NT_034400AL3563781448413763RH711061540.36    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448413763RH14186  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448414183RH260331540.36    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448427513RH646811537.59    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448456833RH664991536.80    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448544983RH508541538.16  1628.901 AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448705743RH1215  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448707033RH37798  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448717173RH1041591540.36    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448725283WI-7969    1621.701 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448725283RH506251538.95    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448725283RH14117  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448726133RH1201  12345.00  1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448869233RH806711537.59    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448893983RH8783  21652.00  2 AC015706.3, AF129075.2, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781448959593RH479201536.80    1 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781449116393RH642621540.36  1628.101 AC015706.3, AL356378.17
S/G/Y/R/B/O NT_034400AL3563781449678323WI-11526    1625.701 AL356378.17
S/G/Y/R/B/O NT_034400AL3563781449678323RH639181538.78    1 AL356378.17
S/G/Y/R/B/O NT_034400AL3563781449680113RH637991535.66  1627.301 AL356378.17
S/G/Y/R/B/O NT_034400AL3919041450196623          
S/G/Y/R/B/O NT_034400AL5906671450858843          
S/G/Y/R/B/O NT_034400AL3592071453161883RH796421536.01    1 AL359207.7
S/G/Y/R/B/O NT_034400AL3592071453339353RH454581537.26    1 AL359207.7
S/G/Y/R/B/O NT_034400AL3592071453460423RH938171535.33    1 AL359207.7
S/G/Y/R/B/O NT_034400AL3652601454369603WI-497    1621.701 AL365260.11
S/G/Y/R/B/O NT_034400AL3652601454430313RH638841537.59    1 AL365260.11
S/G/Y/R/B/O NT_034400AL3652601454430313WI-8386    1628.701 AL365260.11
S/G/Y/R/B/O NT_034400AL3652601454439183RH694911536.80    1 AL365260.11
S/G/Y/R/B/O NT_034400AL3652601454450093RH711901536.74    1 AL365260.11
S/G/Y/R/B/O NT_034400AL4455911455983933RH941601536.12    1 AL445591.10
S/G/Y/R/B/O NT_034400 - RH489861537.59    1 AL355388.24
S/G/Y/R/B/O NT_034400 - SGC31941    1627.102 AC026900.3, AC027209.2, AL138796.6, AL390296.8, AL592491.7
S/G/Y/R/B/O NT_034400 - RH800231537.26    0 AL592424.13