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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_026945
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_026945AL5918061586775313RH258741588.73    1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586782593RH508801588.77    1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586782593SGC34299    1701.401 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586784113RH182131579.79    1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586794343WI-8024    1717.101 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586794343RH497331581.83    1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586794343RH1951  16126.00  1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061586794343RH710811579.79    1 AL162592.19, AL354714.21, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587188503RH703461584.91    1 AL162592.19, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587189663RH942171586.74    1 AL162592.19, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587281973RH764691588.15    1 AL162592.19, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587282723RH360211577.96    1 AL162592.19, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587294403RH1228  16144.00  1 AL162592.19, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587814133RH643521589.82    1 AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587814133WI-15774    1700.801 AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587814253RH668771579.89    1 AL591806.16
S/G/Y/R/B/O NT_026945AL5918061587817793RH710831589.9216144.00  1 AL591806.16
S/G/Y/R/B/O NT_026945AL5918061588018653RH638981588.73    1 AL590651.4, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061588018653WI-12338    1702.701 AL590651.4, AL591806.16
S/G/Y/R/B/O NT_026945AL5918061588025853RH711131587.05    1 AL590651.4, AL591806.16
S/G/Y/R/B/O NT_026945AL5907141588396493WI-8332    1717.701 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588396493RH638871588.98    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588398113RH107431579.99    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588466633RH158371591.27    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588522593RH712181589.92    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588525743RH118451588.67    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588526713RH104301587.05    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588528543RH645781588.67    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588577923RH645231590.38    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588721183RH279011596.42    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141588952243RH703041581.83    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589001593RH13932  16149.001719.101 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589001593RH507951588.36    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589032933RH13788  16138.00  1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589035073RH1344  16149.00  1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589109473RH713141588.67    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589109663RH709801579.79    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589115513WI-6948    1720.001 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589115513RH502401588.98    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589115643RH677261579.79    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5907141589147483RH1038101588.98    1 AL590651.4, AL590714.27
S/G/Y/R/B/O NT_026945AL5922951589664202RH786631589.92    1 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590057092RH637941592.81    1 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590057092WI-11628    1735.501 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590440162RH32257  16149.00  2 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590462822RH688771587.23    1 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590471862RH672671578.06    1 AL592295.17
S/G/Y/R/B/O NT_026945AL5922951590523312RH1042871590.02    1 AL592295.17
S/G/Y/R/B/O NT_026945 - RH500391589.92    1 AL139409.9, AL353686.9, AL353686.9, AL772384.2
S/G/Y/R/B/O NT_026945 - RH1386  16141.00  1 AL158846.4, AL391069.11


  NT_026945 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_026945 - RH646931590.02    0  
S/G/Y/R/B/O NT_026945 - RH8507  16146.00  1 AC068971.2, AL391335.23, AL589765.19
S/G/Y/R/B/O NT_026945 - RH710881590.02    2 AL139010.28, AL772384.2, AL772384.2
S/G/Y/R/B/O NT_026945 - RH8998  16146.00  1 AL356504.5
S/G/Y/R/B/O NT_026945 - RH784231590.02    0  
S/G/Y/R/B/O NT_026945 - RH912131590.02    0