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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_032971
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032971AC092815439264393RH14018  12362.00  1 AC011772.3, AC092815.2
S/G/Y/R/B/O NT_032971AC092815439276353RH709591125.97    1 AC011772.3, AC092815.2
S/G/Y/R/B/O NT_032971AL451062440095723RH498301131.75    1 AC005193.2, AC011772.3, AL451062.12
S/G/Y/R/B/O NT_032971AL451062440095723SGC34395    1145.401 AC005193.2, AC011772.3, AL451062.12
S/G/Y/R/B/O NT_032971AL451062440096283RH358861133.01    1 AC005193.2, AC011772.3, AL451062.12
S/G/Y/R/B/O NT_032971AL451062440701053D1S211    1149.401 AC005193.2, AL451062.12
S/G/Y/R/B/O NT_032971AC004950441367963RH644241129.9812372.00  1 AC004950.2, AL592548.10
S/G/Y/R/B/O NT_032971AC004950441367963SGC32893    1145.201 AC004950.2, AL592548.10
S/G/Y/R/B/O NT_032971AC004950441369143RH475241135.27    1 AC004950.2, AL592548.10
S/G/Y/R/B/O NT_032971AL357079442345471RH461761130.18    1 AC005038.1, AC005038.5, AC005051.1, AL357079.21
S/G/Y/R/B/O NT_032971AL357079442483071RH682411139.31    1 AC005038.1, AC005038.5, AC005051.1, AL357079.21
S/G/Y/R/B/O NT_032971AL357079442713181RH418901132.23    1 AC005038.1, AC005038.5, AC005051.1, AL357079.21
S/G/Y/R/B/O NT_032971AL357079442716201RH38074  12390.00  1 AC005038.1, AC005038.5, AC005051.1, AL357079.21
S/G/Y/R/B/O NT_032971AL357079442820171RH502721131.85    1 AC005038.1, AC005038.5, AL357079.21
S/G/Y/R/B/O NT_032971AL357079442820171WI-12863    1145.501 AC005038.1, AC005038.5, AL357079.21
S/G/Y/R/B/O NT_032971AL139220442948013RH127711132.17    1 AC005038.1, AC005038.5, AL139220.13, AL357079.21
S/G/Y/R/B/O NT_032971AL139220443001713RH786921129.98    1 AC005038.1, AC005038.5, AL139220.13, AL357079.21
S/G/Y/R/B/O NT_032971AL139220444083953RH479901125.97    1 AC005087.1, AC005087.2, AL139220.13
S/G/Y/R/B/O NT_032971AL356653444223693          
S/G/Y/R/B/O NT_032971AL359839444365533          
S/G/Y/R/B/O NT_032971 - RH1019461137.30    0  
S/G/Y/R/B/O NT_032971 - RH1939  12377.00  1 AL136373.21, AL357392.5
S/G/Y/R/B/O NT_032971 - RH1026611130.18    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032971 - RH37714  12377.00  1 AL135960.1, AL390073.5
S/G/Y/R/B/O NT_032971 - RH1030361131.08    1 AC025994.2, AL050341.18
S/G/Y/R/B/O NT_032971 - RH38054  12377.00  1 AC022754.2, AL513319.3, AL607122.20
S/G/Y/R/B/O NT_032971 - RH1045221131.85    2 AC073835.2, AL033526.24, AL035404.20
S/G/Y/R/B/O NT_032971 - RH1045411132.59    0  
S/G/Y/R/B/O NT_032971 - RH176621130.08    1 AL359473.22
S/G/Y/R/B/O NT_032971 - RH182951130.29    1 AL359540.19
S/G/Y/R/B/O NT_032971 - RH258201132.38    1 AL359473.22
S/G/Y/R/B/O NT_032971 - RH263571130.49    1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032971 - RH644921135.69    1 AL031289.1
S/G/Y/R/B/O NT_032971 - RH417921133.01    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032971 - RH468861131.64    1 AL391730.13
S/G/Y/R/B/O NT_032971 - RH470181139.31    1 AC093420.1, AL139289.6
S/G/Y/R/B/O NT_032971 - RH473611131.54    1 AC114492.2, AL359754.6
S/G/Y/R/B/O NT_032971 - RH474611137.30    0 AC005043.2, AL035417.15
S/G/Y/R/B/O NT_032971 - RH482111139.31    1 AC025504.3, AC093420.1
S/G/Y/R/B/O NT_032971 - RH491441137.30    0 AL512786.2, AL583862.32
S/G/Y/R/B/O NT_032971 - RH500631130.08    1 AC016328.3, AC019268.4, AL355883.3, AL596225.11
S/G/Y/R/B/O NT_032971 - RH501411132.49    1 AL050341.18
S/G/Y/R/B/O NT_032971 - RH504291132.23    1 AC015534.6, AC026857.2, AL390915.8, AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032971 - RH505651130.91    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032971 - RH643781132.64    1 AC024511.5, AL365277.21, AL713993.4
S/G/Y/R/B/O NT_032971 - RH644521131.54    1 AL136380.22, AL355991.5, AL611928.7
S/G/Y/R/B/O NT_032971 - RH507021132.59    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032971 - RH507611132.17    1 AL110502.1
S/G/Y/R/B/O NT_032971 - RH644881137.20    1 AC013579.4, AC025921.1, AC105268.2
S/G/Y/R/B/O NT_032971 - RH645891134.37    1 AL031985.10, AL603839.9


  NT_032971 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032971 - RH647131133.74    1 AL136127.6, AL354974.3, AL445933.32
S/G/Y/R/B/O NT_032971 - RH647671130.39    1 AL604028.14
S/G/Y/R/B/O NT_032971 - RH655271131.54    1 AC124780.1, AL512599.31
S/G/Y/R/B/O NT_032971 - RH658691131.85    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032971 - RH666141130.39    0 AC016521.4, AC022182.8
S/G/Y/R/B/O NT_032971 - RH678811130.08    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032971 - RH686521130.39    1 AL359540.19
S/G/Y/R/B/O NT_032971 - RH696511130.39    1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032971 - RH697281131.50    1 AL355480.22
S/G/Y/R/B/O NT_032971 - RH757531133.01    0  
S/G/Y/R/B/O NT_032971 - RH760441132.28    0 AL513331.15
S/G/Y/R/B/O NT_032971 - RH767381130.70    1 AL355480.22
S/G/Y/R/B/O NT_032971 - RH786081130.08    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032971 - RH788941131.43    1 AL359473.22
S/G/Y/R/B/O NT_032971 - RH801431133.01    0 AL355519.8, AL583862.32
S/G/Y/R/B/O NT_032971 - RH987401130.39    0  
S/G/Y/R/B/O NT_032971 - RH990851133.84    0 AL355801.9, AL513331.15