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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_004734
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004734AL3653662399092373          
S/G/Y/R/B/O NT_004734AC0920162401254993RH119501750.44    1 AC068598.1, AC092016.2
S/G/Y/R/B/O NT_004734AL5916862401831483WI-9664    1922.801 AC012079.4, AC024501.2, AL390999.3, AL513486.7, AL591686.9
S/G/Y/R/B/O NT_004734AL5916862401831483RH639501750.44    1 AC012079.4, AC024501.2, AL390999.3, AL513486.7, AL591686.9
S/G/Y/R/B/O NT_004734AL5916862401831483RH765561750.44    1 AC012079.4, AC024501.2, AL390999.3, AL513486.7, AL591686.9
S/G/Y/R/B/O NT_004734AL5916862401843263RH470791753.73    1 AC012079.4, AC024501.2, AL390999.3, AL513486.7, AL591686.9
S/G/Y/R/B/O NT_004734AL5916862402731973RH1038111750.34    1  
S/G/Y/R/B/O NT_004734AL5916862402857953WI-4683    1922.801 AC012079.4, AC024501.2, AC026828.3, AL390999.3, AL513486.7, AL583845.16
S/G/Y/R/B/O NT_004734AL5838452402859693          
S/G/Y/R/B/O NT_004734AL3602712403381233          
S/G/Y/R/B/O NT_004734AC0133712404329121          
S/G/Y/R/B/O NT_004734AL4457042405402101RH1044201755.15    1 AC027068.2, AL445704.15
S/G/Y/R/B/O NT_004734AC0997852407597713RH497141752.90  1926.201 AC068565.2, AC099785.2
S/G/Y/R/B/O NT_004734AC1184712407776883          
S/G/Y/R/B/O NT_004734AL4456752408776883D1S2679    1924.501 AL445675.9, AL590679.5
S/G/Y/R/B/O NT_004734AL6038252410048663          
S/G/Y/R/B/O NT_004734AL6065342410384083          
S/G/Y/R/B/O NT_004734AC0927822413068303RH921991755.15    1 AC092782.2, AC092806.2
S/G/Y/R/B/O NT_004734AC0928062413159133          
S/G/Y/R/B/O NT_004734AC0965392415642251RH124171755.25    1 AC096539.1
S/G/Y/R/B/O NT_004734AC0965392415647051RH645951755.25    1 AC096539.1
S/G/Y/R/B/O NT_004734AC0965392415649661RH782421755.25    1 AC096539.1
S/G/Y/R/B/O NT_004734AC0965392415661541RH127601755.25    1 AC096539.1
S/G/Y/R/B/O NT_004734AC0965392415671681RH646591755.25    1 AC096539.1
S/G/Y/R/B/O NT_004734AC0965392415674231RH123521755.15    1 AC096539.1
S/G/Y/R/B/O NT_004734AL5917212415963523RH710541755.35  1927.801 AC023843.2, AL591721.7
S/G/Y/R/B/O NT_004734AL5917212415963523RH708691755.25    1 AC023843.2, AL591721.7
S/G/Y/R/B/O NT_004734AL5917212416485763RH480101755.25    1 AC023843.2, AL591721.7
S/G/Y/R/B/O NT_004734AL6628892416807343RH710471756.75  1929.501 AC023843.2, AL662889.5
S/G/Y/R/B/O NT_004734AL5921512418504983RH644411755.25  1928.101 AL592151.13
S/G/Y/R/B/O NT_004734AL5921512418504983RH124801755.25    1 AL592151.13
S/G/Y/R/B/O NT_004734AL5921512418504983RH703331755.25    1 AL592151.13
S/G/Y/R/B/O NT_004734AL5921512418984863RH647241755.35    1 AL592151.13
S/G/Y/R/B/O NT_004734AL5918852419550463WI-5944    1928.201 AC067778.2, AC080120.2, AL591885.10
S/G/Y/R/B/O NT_004734AL5904832421061741RH1044721755.25    1 AC025342.1, AC026041.5, AL590483.28
S/G/Y/R/B/O NT_004734AL5904832421061771RH160211755.25    1 AC026041.5, AL590483.28
S/G/Y/R/B/O NT_004734AL3581772421859913RH493141755.2519454.00  1 AL358177.20
S/G/Y/R/B/O NT_004734AL6629152422559103          
S/G/Y/R/B/O NT_004734AL3554752423098393          
S/G/Y/R/B/O NT_004734AL6454652424240683RH1034821755.35    1 AL591168.3, AL645465.15
S/G/Y/R/B/O NT_004734AL6454652424574823RH260001755.15    1 AC021775.3, AL591168.3, AL645465.15
S/G/Y/R/B/O NT_004734AL6454652424575773RH665541755.15    1 AC021775.3, AL591168.3, AL645465.15
S/G/Y/R/B/O NT_004734AL6454652424577943RH687101755.25    1 AC021775.3, AL591168.3, AL645465.15
S/G/Y/R/B/O NT_004734AL6454652424583173RH507341755.25  1928.101 AC021775.3, AL645465.15
S/G/Y/R/B/O NT_004734AL5915942424706883          
S/G/Y/R/B/O NT_004734AC0997572426209813          
S/G/Y/R/B/O NT_004734AL4510072427576523RH752641755.35    1 AL451007.17
S/G/Y/R/B/O NT_004734AL4510072427577243RH669101755.25    1 AL451007.17
S/G/Y/R/B/O NT_004734AL4510072427590843RH646031755.25    1 AL451007.17
S/G/Y/R/B/O NT_004734AL4510072427594133RH711301755.25    1 AL451007.17


  NT_004734 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004734AC1059112428943422RH937461755.15    1 AC105911.9
S/G/Y/R/B/O NT_004734AC1059112428983862RH504921755.25  1931.001 AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429007332RH4813110366.74    2 AC025690.3, AC105911.9, AL513534.17
S/G/Y/R/B/O NT_004734AC1059112429018762RH471961755.25    1 AC025690.3, AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429024732RH915501755.15    1 AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429080602RH924461755.25    1 AC025690.3, AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429095372RH644751755.25  1929.701 AC025690.3, AC025690.3, AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429115872RH181257246.28    2 AC009468.3, AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429139752RH783031755.35    1 AC025690.3, AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429225972RH938031755.15    1 AC105911.9
S/G/Y/R/B/O NT_004734AC1059112429752972RH929681755.25    1 AC105911.9
S/G/Y/R/B/O NT_004734AL6064832429789663          
S/G/Y/R/B/O NT_004734AL3565122430230273RH922091755.25    1 AC105911.9, AL356512.19
S/G/Y/R/B/O NT_004734AL5897632430992223RH1233  19471.00  1 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632430993423RH644961755.15    1 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632431450843RH695511755.25    1 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632431490613RH644111755.2519485.001929.501 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632431490613RH178891755.25    1 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632431803923RH697591755.25    1 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734AL5897632431912183RH644191755.35  1931.001 AL356606.10, AL589763.6
S/G/Y/R/B/O NT_004734 - RH38036  19479.00  0